FFCP PHASE1:Hg19::chr12:27732320..27732331,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1358 | |||
|description=CAGE_peak_at_chr12:27732320..27732331,+ | |||
|id=chr12:27732320..27732331,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.07e-09!6;CL:0002138!1.07e-09!6;CL:0005022!1.07e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.01e-25;3!CL:0002144;1.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.95e-25,3;CL:0002144,1.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-24!115;UBERON:0002133!1.61e-08!2;UBERON:0002465!1.68e-08!10;UBERON:0000341!1.14e-07!2;UBERON:0001473!2.82e-07!8;UBERON:0004536!2.82e-07!8;UBERON:0006558!2.82e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.01e-25;3!UBERON:0000920;7.01e-25;3!UBERON:0001255;2.48e-10;2!UBERON:0001556;2.48e-10;2!UBERON:0005631;3.76e-08;10!UBERON:0000158;3.76e-08;10!UBERON:0010523;1.81e-07;3!UBERON:0001915;1.81e-07;3!UBERON:0001982;1.81e-07;3!UBERON:0002106;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.95e-25,3;UBERON:0003124,3.30e-11,7;UBERON:0001255,2.07e-10,2;UBERON:0001556,2.07e-10,2;UBERON:0010523,1.82e-07,3;UBERON:0001915,1.82e-07,3;UBERON:0001982,1.82e-07,3;UBERON:0002106,2.47e-07,3;UBERON:0004854,2.47e-07,3;UBERON:0009034,2.47e-07,3;UBERON:0002095,2.47e-07,3;UBERON:0004782,2.47e-07,3;UBERON:0003281,2.47e-07,3;UBERON:0009664,2.47e-07,3;UBERON:0002296,2.47e-07,3;UBERON:0005602,2.47e-07,3;UBERON:0001179,2.47e-07,3;UBERON:0006293,2.47e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42306505074684,0.33472061276467,0,11.4040815857777,0.976248230192678,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,1.27600463892768,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0.308696632431779,0.655678681511872,0,0.735444965261716,0,0,0,0,0,1.31577485171795,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.509177266225319,1.61693751166575,0.435433495793923,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr12:27732320..27732331,+ | |||
}} |
Revision as of 12:48, 11 January 2014
Short description: | p@chr12:27732320..27732331, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:27732320..27732331, + |
Coexpression cluster: | C1358_Endothelial_gall_thyroid_throat_colon_Lymphatic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.95e-25 | 3 |
capillary endothelial cell | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.95e-25 | 3 |
chorion | 3.30e-11 | 7 |
urinary bladder | 2.07e-10 | 2 |
lower urinary tract | 2.07e-10 | 2 |
microcirculatory vessel | 1.82e-07 | 3 |
endothelium of capillary | 1.82e-07 | 3 |
capillary | 1.82e-07 | 3 |
spleen | 2.47e-07 | 3 |
gastrointestinal system mesentery | 2.47e-07 | 3 |
stomach region | 2.47e-07 | 3 |
mesentery | 2.47e-07 | 3 |
gastrointestinal system serosa | 2.47e-07 | 3 |
mesentery of stomach | 2.47e-07 | 3 |
gut mesentery | 2.47e-07 | 3 |
dorsal mesentery | 2.47e-07 | 3 |
dorsal mesogastrium | 2.47e-07 | 3 |
peritoneal cavity | 2.47e-07 | 3 |
spleen primordium | 2.47e-07 | 3 |