FFCP PHASE1:Hg19::chr12:53491743..53491754,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=103bp_to_AK074416_5end | |||
|coexpression_cluster_id=C3293 | |||
|description=CAGE_peak_1_at_AK074416_5end | |||
|id=chr12:53491743..53491754,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.60e-38!180;CL:0000183!2.38e-25!59;CL:0000680!1.43e-24!57;CL:0000056!1.43e-24!57;CL:0000355!1.43e-24!57;CL:0000187!2.11e-23!54;CL:0000057!2.48e-19!75;CL:0000393!6.22e-19!60;CL:0000211!6.22e-19!60;CL:0000222!1.47e-18!119;CL:0000192!2.64e-18!42;CL:0000514!2.64e-18!42;CL:0000359!1.22e-14!32;CL:0000220!2.66e-09!246;CL:0002321!7.93e-09!248;CL:0002620!9.02e-07!23;CL:0000144!9.99e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.58e-16;43!CL:0000359;5.74e-16;32!CL:0000187;1.48e-15;55!CL:0000393;1.07e-11;61!CL:0000211;1.07e-11;61!CL:0000057;1.99e-08;73!CL:0002320;1.26e-07;188!CL:0002620;1.35e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.58e-29,58;CL:0000056,3.58e-29,58;CL:0000355,3.58e-29,58;CL:0000187,8.40e-28,55;CL:0000393,1.57e-22,61;CL:0000211,1.57e-22,61;CL:0000192,7.91e-22,43;CL:0000514,7.91e-22,43;CL:0000057,1.27e-21,76;CL:0000222,2.69e-19,121;CL:0000359,7.94e-17,32;CL:0000048,1.72e-10,427;CL:0000723,1.41e-09,433;CL:0002321,1.38e-08,250;CL:0000034,1.94e-08,441;CL:0002620,1.20e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.58e-16;43!CL:0000355;3.54e-15;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.52e-26!83;UBERON:0002329!3.52e-26!83;UBERON:0003077!3.52e-26!83;UBERON:0003059!3.52e-26!83;UBERON:0007282!3.52e-26!83;UBERON:0009618!3.52e-26!83;UBERON:0007285!3.52e-26!83;UBERON:0004290!2.16e-25!70;UBERON:0001134!1.29e-22!61;UBERON:0002036!1.29e-22!61;UBERON:0003082!1.29e-22!61;UBERON:0002385!5.04e-22!63;UBERON:0001015!5.04e-22!63;UBERON:0000383!5.04e-22!63;UBERON:0000486!3.03e-21!82;UBERON:0005256!2.96e-17!143;UBERON:0000475!6.30e-16!365;UBERON:0000481!2.72e-14!347;UBERON:0000119!1.16e-13!312;UBERON:0000483!4.34e-13!309;UBERON:0000490!5.16e-13!138;UBERON:0001637!6.28e-12!42;UBERON:0003509!6.28e-12!42;UBERON:0004572!6.28e-12!42;UBERON:0004872!8.33e-12!84;UBERON:0002049!1.62e-11!79;UBERON:0007798!1.62e-11!79;UBERON:0002100!9.05e-11!216;UBERON:0004573!2.29e-10!33;UBERON:0004571!2.29e-10!33;UBERON:0003914!2.57e-10!118;UBERON:0001981!2.60e-10!60;UBERON:0007500!2.60e-10!60;UBERON:0004537!2.60e-10!60;UBERON:0006965!2.60e-10!60;UBERON:0000477!2.93e-09!286;UBERON:0004535!5.44e-09!110;UBERON:0000055!1.01e-08!69;UBERON:0001009!1.58e-08!113;UBERON:0003104!6.94e-08!238;UBERON:0009142!6.94e-08!238;UBERON:0004111!1.49e-07!241;UBERON:0000025!1.54e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.09e-10;31!UBERON:0001015;8.09e-10;31!UBERON:0000383;8.09e-10;31!UBERON:0004573;8.41e-10;33!UBERON:0004571;8.41e-10;33!UBERON:0002204;5.14e-09;70!UBERON:0001637;2.96e-08;42!UBERON:0003509;2.96e-08;42!UBERON:0004572;2.96e-08;42!UBERON:0002384;1.11e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.23e-31,73;UBERON:0007503,8.47e-31,78;UBERON:0002329,1.26e-30,71;UBERON:0003059,1.26e-30,71;UBERON:0007282,1.26e-30,71;UBERON:0004290,1.26e-30,71;UBERON:0009618,1.26e-30,71;UBERON:0003077,1.59e-30,72;UBERON:0007285,1.59e-30,72;UBERON:0001134,2.25e-27,62;UBERON:0002036,2.25e-27,62;UBERON:0003082,2.25e-27,62;UBERON:0002385,2.26e-26,64;UBERON:0001015,2.26e-26,64;UBERON:0000383,2.26e-26,64;UBERON:0000486,9.78e-26,83;UBERON:0005256,1.93e-17,122;UBERON:0003104,4.88e-16,160;UBERON:0009142,4.88e-16,160;UBERON:0000490,6.59e-14,148;UBERON:0001637,4.23e-12,42;UBERON:0003509,4.23e-12,42;UBERON:0004572,4.23e-12,42;UBERON:0004573,5.12e-11,33;UBERON:0004571,5.12e-11,33;UBERON:0000119,5.35e-11,309;UBERON:0000483,1.92e-10,306;UBERON:0002049,1.18e-09,78;UBERON:0007798,1.18e-09,78;UBERON:0004872,1.74e-09,83;UBERON:0002100,2.07e-09,199;UBERON:0004535,2.06e-08,109;UBERON:0007500,3.45e-08,59;UBERON:0001981,3.45e-08,59;UBERON:0004537,3.45e-08,59;UBERON:0006965,3.45e-08,59;UBERON:0002204,5.87e-08,167;UBERON:0003914,7.25e-08,117;UBERON:0001009,1.16e-07,112 | |||
|phase1_expression=2.54349730978779,1.2846031433459,0.704772020479856,6.00439790118782,1.34088328328186,8.72338524100369,0,5.68547886084148,0,1.96587149201207,0.697801167972428,0,0.791300934685361,11.7578035312044,33.8025323242474,7.39557661096953,12.0538905604795,16.7971320789096,5.85519358548608,5.29420549730188,31.2121057603707,0.940364164434263,2.0036519099174,1.09499540058307,1.00434111675842,0.0764134057479513,0,0,0.393364276848904,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0.647787332037959,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0.855038231223746,1.19350006319454,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0.535081656179426,0,0,0,0,0,0,0.651083453856419,0,0,0.383959833463255,0,0.236777252044017,0,1.00803371612366,1.06976078313403,0.868946423296794,21.9426179682566,13.4140171940727,3.58015173161885,11.9274920286907,3.00802746381534,11.2980284789442,0,6.32625331393427,3.87592750372678,8.20398770611487,9.04698292639198,0.196468613246569,0,2.59549109949101,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,4.52246353539208,2.51699661725944,0.275118041940067,0.835979866147242,0.258416759169329,0,0,1.61131726843659,1.52054421143703,0,0,0,0.17859945656816,0.673588117878509,0.450445921933289,1.53316637465883,0.949265659568129,1.28241220751285,0,0,0,8.44852317882041,3.92554586160197,2.38336525463794,2.0078563452417,9.22137793715728,9.53151920241922,1.06748995729705,4.19334832309172,2.17847724779836,1.75123873690594,2.61539044981534,0,2.88087962239999,1.40592859100278,22.1633654549528,5.13424639390004,10.9097536802815,1.76151747965647,1.13311061057692,2.52811452064047,2.85815839756851,3.0708579327942,4.13303124703062,2.37600571456411,2.71993622206413,2.73048408581408,25.8702531053846,2.02003336744879,3.00284447692714,1.38532057742091,9.65750765937843,6.43624371177941,4.35690370829131,3.51639767796065,2.33206526395521,2.13557388818567,1.69545520927649,4.50136644126603,3.81294358182224,2.83404594050192,4.65292140828975,2.19409231913646,7.98983442321829,4.03894038790583,1.84099797284599,4.0411514204703,4.26011511019937,6.7503905812519,4.0694542154517,0,0.272746120590835,0.286804595389004,0,0,0.232387885739037,0.414644220061482,0,0,12.5159625863853,6.43240938192885,2.76269842704961,10.2160944167035,15.8813485967309,0.354920400119532,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0.738155454624648,1.40241773803446,6.5851841813024,11.7606969108434,1.26755034821831,0,0,0.441463099414651,0,5.31860211925429,0,0,0.301586917234893,0.370353780634118,1.95484983186195,8.31947828223663,11.5465073620219,1.97081688457631,1.6437217193015,0.144366447761074,0.925971025153221,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0.290633938513962,0.766765358330422,0,0.352193736052904,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0.300343057843917,0,2.46688385559794,8.7192013766656,1.6134422880609,1.55126058909333,50.0719024192635,6.762422020448,3.72313363218819,14.5610411675913,11.8315392160585,15.6034045225606,16.2517529199821,0.285955987316295,2.71310802695722,11.5253647149308,3.90883421152482,0.355391948742546,0,6.33022691825131,5.22920075160176,4.69873058555668,0,0,0,3.35474797688216,6.89171615004683,9.98458335285029,7.23906533337896,11.5066740628215,2.68591444859843,0.672510863961164,0.197030760201927,0,0,0.254094624222463,0,0,0.670065061337395,0,0,0,0,7.11610651971011,57.5196099218629,25.4989122277751,11.6463682457252,10.1704523614382,8.51593041183247,4.09994952474496,3.00946099727719,11.3703752027992,12.4167685551006,1.99267679560631,4.05612170791747,6.51627108510621,7.83204629850962,2.74514739048685,0,0,0,0,0,1.5119514666484,4.71404834855676,0.61384789315225,5.05188169979532,4.86928767171664,2.04682899626681,3.53878626515936,25.2310712956485,3.08419387605311,6.5697838365857,4.02423064467665,2.59627214591811,14.0614557936551,0,0.601519410909855,0,3.3296189967736,6.3731908802351,7.21184282276833,0,0,2.35304930753057,5.84556898613043,0.211103257785751,3.4120015221269,3.2317804002538,1.72732732881711,0,8.67028600140329,14.0473136679359,0,0,2.0148727924996,0,0,6.15480300279334,1.96808787419823,0.325378394664303,0.103041011647722,2.65551447973196,2.0627374980147,0,0,11.2478750890912,2.61010939388729,12.9400838376301,12.1267903033642,4.27293374702045,3.6522883255213,11.4563188192241,10.0567420350999,2.75999310504886,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,24.1719685634589,1.88887408098384,8.3644472419272,6.46870518369786,7.45228442443831,5.21959795245044,6.11569923042936,6.15437012990562,3.34942532423701,8.85862389212432,9.72213989011507,10.747707235076,14.9778645811872,13.6827396608153,8.63443504219153,2.33834194858309,6.03981465419321,5.41937050790158,9.50257663394585,33.2871674463317,9.68894449349657,6.82687234725426,13.1605284400894,29.5820410918915,4.50449707646353,3.81794666275024,28.2520291550607,8.27048015319186,8.62470667813585,14.4688792133742,6.94530641120025,14.4296845450259,1.42037263873893,6.8161169581945,12.6763021139509,1.43411352204052,1.57198465620994,2.85336841185,5.67617702512956,18.7885795414921,21.7334629353535,4.17420491142287,7.34862912514464,0,1.34060455107157,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,3.84991942105343,2.20536194382929,0,0,0,1.11598390910176,1.59663497146253,0.191505370132367,0.211673582723883,0,2.52717460302113,0.456469358066384,0.156679895773023,5.01268954180134,0.169291777801603,0,0,0,0.343505344755765,0,0,0,1.36771666781428,0,0,0.270455678475983,0,0,0,1.02555725490326,0,0,5.68272293612826,0.23874448473769,0,0,3.97659059106519,0.984685914873589,1.66963057534359,0,0,3.38721580026819,0,0,0.306806047506464,0,1.24415835064723,1.16828856491525,0.358042349351218,0,0.789147245095469,2.3948309234694,4.44547960578548,2.90799823828566,1.02044907978036,0,0,0,2.17499872630438,1.0241410345695,2.03402920234213,0,0.689486746482929,0.291604613383254,0,1.77148277162768,3.13550740426061,0,0,0,1.53569778007781,0,1.25481369850743,1.46205491157214,1.13942055847001,0,0,0,0.957003479195758,0.183195186803725,0,11.241262801531,0.156980256395025,0.831058409500782,0,0,0,0,0,0.421996129056054,0,0,0,0,0.619202951523374,1.22206028986725,0,0,0.104421949505455,0.067401132980677,1.60515529459758,1.63985112007737,0,0,6.31228986788641,0.394584402849391,1.20990716048664,1.83643656978294,0.695052375913368,0,0,1.99396161812156,0.661983911750998,0.313932918407225,0,0.284609546029793,0,0,1.37189356380129,1.30588809870604,2.62090002363045,1.54787429224455,0.483781656445426,0.146178634172371,0.739039113478883,0.484945082442097,0,1.35588444468319,5.20759313657653,2.18586072873289,0.379864775735272,0,1.92381168603681,0.426905989478705,1.9980960958213,0.144090417154106,0,0,0,1.73953549791606,0,2.31037150325144,2.510468311496,4.58991979363448,2.31160471921215,4.80336230967832,0,0,9.45483971123906,0,0.558564802544508,0.916641696046735,0.717873024576814,0.599037001496973,0.429226048136571,0,0.268733889946905,1.44119953416961,0,0.236349546921671,0,0.202210631562555,0.0984274815147488,0,2.38568906942791,0.544813624446302,0,0.412618309791701,0,0,0,0.91124334987037,4.69608562638973,0.236417121897595,0.0524545881349981,0.739202355635845,0.35857467866569,0,1.42939065274673,1.98627591109629,0,41.8109693350359,29.3835307008431,12.4103196841575,3.59190574687462,0.082092520749339,5.28202867534807,6.91203758272767,0,0,0.517131825446202,0.52893040697076,0.171086837884329,0,0.213574825135389,0,0,0,0.197611631897944,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0,0,3.54427271986794,1.09823638411767,0.625954653532499,0.573409195690071,0.110929051536852,0.434674820589684,0,1.24980407962107,0,0,1.6468607378872,0,0,8.95528817321244,3.73941295755559,14.4249523990679,6.62910518462812,11.823691382371,22.2452805399134,4.11912123114462,16.9378634614828,6.52836242447678,0.887130899937803,2.86734180894664,1.79921244865442,3.26052209440145,21.9794290155653,3.98762571836992,2.60872530905867,5.55953153289708,15.2322084867518,3.25496586563729,1.81848659202559,3.7593694964871,5.10437135866343,2.3885753321917,4.00027764663154,16.1395981435913,15.4904764832323,0,0,0.428883182749851,0.782982875895635,7.93470739292953,1.389134845943,5.87368090815522,15.0434626508449,3.39681591877069,1.53498834705095,6.5374983999976,31.2520741998882,15.8805894213888,2.81865670446741,0,4.55789934266073,0.414775308455192,0,0,0,0,14.7463745252232,0,0.19998739585493,0,0,2.27006381426734,5.8913904080589,0,0.622077260032973,0,0,0,0.327628914576042,0.169732529954025,0,0.247871528518004,2.23457967189298,12.0841653248299,0.0788617450012534,2.40171224485641,6.34816698643231,5.2061731150044,0.706521476061055,1.41696576325585,0.638535436228605,1.64093091392604,1.00828678488687,1.03735878696327,1.29180516505481,1.42769420259154,1.86480665151949,0,2.38457178078183,1.15525666150338,12.5856091504165,0,0.596748666348824,0.752103283492572,3.63069123666336,0,0,1.14640342257068,0.739280431085226,0.742913430802341,0,0.413373593002368,1.33173201407204,1.64092442705466,0,0.992422356778588,0.703484977438482,0.383287282918786,1.07140367175657,0,0,0,0.177404740325278,0,0.342976018874837,0.543757863814654,1.05236437700559,0.118193840883968,0.111231401892069,0.549451649953598,4.55635210756405,0,1.82631744101899,4.96633459802829,0,1.00067161847319,0,0.23248285073625,0,8.81882501203278,0.828864656652147,1.0243108625637,0.691259661814092,0,1.41998400876678,1.10777426186905,0,0.22910686854405,1.5510319283216,7.64431151181946,0,0.098150233615243,0.121917924982269,0,0,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0.231522474323834,0.218559560503957,1.41095188908457,1.22574160876953,0,1.17785080268967,0,2.5359343655004,8.15650150501521,0.375935671919414,0.322289439867886,0,0,1.05868461514708,1.84555143385087,0.730336388246517,0.917458566809082,0.286679166302903,0,1.76777874496378,0.436350690340377,0.5290268405154,9.67187047233553,8.78133694399695,23.3618343546846,0,0,0,0,0,0,0,1.28823786971007,0.535928260312357,1.65833887891756,0.310298987585686,1.27940389140589,0.476128862927481,0.193766729508018,0.186224142887574,7.06430734257865,0.318235791390825,0.808468755832877,1.52401723527873,1.36893320434112,0.202056159043763,0.286888821570705,3.32660356546013,1.38385556638657,1.28072815053259,7.7228912914776,1.97615444634491,2.34640942403454,0.611207220914332,1.62758471326295,1.99727032255654,1.81146414231924,0 | |||
|short_description=p1@AK074416 | |||
}} |
Revision as of 13:41, 11 January 2014
Short description: | p1@AK074416 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK074416_5end |
Coexpression cluster: | C3293_Mesenchymal_Smooth_Synoviocyte_tenocyte_leiomyoma_Cardiac_Fibroblast |
Association with transcript: | 103bp_to_AK074416_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.58e-29 | 58 |
myoblast | 3.58e-29 | 58 |
multi-potent skeletal muscle stem cell | 3.58e-29 | 58 |
muscle cell | 8.40e-28 | 55 |
electrically responsive cell | 1.57e-22 | 61 |
electrically active cell | 1.57e-22 | 61 |
smooth muscle cell | 7.91e-22 | 43 |
smooth muscle myoblast | 7.91e-22 | 43 |
fibroblast | 1.27e-21 | 76 |
mesodermal cell | 2.69e-19 | 121 |
vascular associated smooth muscle cell | 7.94e-17 | 32 |
multi fate stem cell | 1.72e-10 | 427 |
somatic stem cell | 1.41e-09 | 433 |
embryonic cell | 1.38e-08 | 250 |
stem cell | 1.94e-08 | 441 |
skin fibroblast | 1.20e-07 | 23 |