FFCP PHASE1:Hg19::chr12:53856262..53856278,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8648 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000547859,uc001sdj.3,uc001sdk.3,uc010soi.1,uc010soj.1_5end | |||
|description=CAGE_peak_12_at_PCBP2_5end | |||
|id=chr12:53856262..53856278,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;1.38e-09;3!CL:0000346;4.46e-09;3!CL:1000428;4.46e-09;3!CL:0002262;5.21e-07;2!CL:1000398;5.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,6.69e-10,3;CL:0000346,2.78e-09,3;CL:1000428,2.78e-09,3;CL:0002262,3.60e-07,2;CL:1000398,3.60e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.38e-09;3!UBERON:0000412;4.46e-09;3!UBERON:0001992;4.46e-09;3!UBERON:0002067;1.27e-07;9!UBERON:0001281;5.21e-07;2!UBERON:0003497;5.21e-07;2!UBERON:0003909;5.21e-07;2!UBERON:0003835;5.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,6.69e-10,3;UBERON:0000412,2.78e-09,3;UBERON:0001992,2.78e-09,3;UBERON:0002067,6.46e-08,9;UBERON:0004016,6.46e-08,9;UBERON:0010083,6.46e-08,9;UBERON:0001281,3.60e-07,2;UBERON:0003497,3.60e-07,2;UBERON:0003909,3.60e-07,2;UBERON:0003835,3.60e-07,2 | |||
|phase1_expression=1.63510541343501,0.642301571672949,0.563817616383885,0,1.34088328328186,0,5.06599756336621,1.89515962028049,1.30592814099919,0.245733936501509,0,0.218441372130172,0.263766978228454,0.37129905888014,0,0,0,0,0.975865597581014,0.123121058076788,0.612002073732759,0,0,0,0.376627918784408,0.305653622991805,0.246301768349837,0,0.393364276848904,0,0.309632246632152,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0,0.553995408531877,0.200544447470142,0,0.447830948479849,0,0,1.89017710413434,1.13362783106643,0.485168122375632,0.464858073811369,0.822335776043652,0,0.575384784644301,0,0,1.37898272294647,1.29096936716765,1.35426486594342,1.31769637679823,0.545812300115692,0.898893937780338,1.22433556948361,0.320929027076094,1.91801137739712,0.659702600373432,0.398927315243264,0.852449501065388,0.870627715885752,0.56738522469114,0,0.251248665256743,0,0,0,0,0.632924774881769,0,0.212604299965044,0.209658645508376,0.44931452458598,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0.954053754535364,0,0,0.764546456250458,0,0,0,0,0,0.411202997999018,0.501559486172034,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0,0,0.390178042679635,0.493313713811028,0.276350017785848,0,0,0.535081656179426,0,0.226618685395132,0,0.34362744548263,1.01207876807801,0,0,0.950452044448374,0.602300476311091,0.383959833463255,0,0.473554504088034,0.821127996921047,0,0.267440195783507,0.434473211648397,0,1.34140171940727,0.255725123687061,0.361439152384566,0,0.869079113764942,0,0.486634870302636,0.378139268656271,0,0.175669571386252,0.458426764241994,0,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0,1.6507082516404,0.417989933073621,0.258416759169329,0,0,0,0.760272105718513,0.732186172644509,0,2.43042584364528,0.17859945656816,0,0.225222960966644,0,0,0.732806975721629,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0.573673241497627,0,0,0,0.98667019366864,0,0.134710672069688,0,0.454072282934794,0,0.234321431833797,1.5608003841516,0,1.49448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,1.18800285728205,0.741800787835671,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0.919463387397059,0.150238058906597,0.226864366320042,0.179389635688862,0.640672166455702,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.184099797284599,1.2931684545505,0,0.503760491138201,0.339121184620975,0.386521706326594,0,0.286804595389004,0.487894824518382,0.265059536642971,0.464775771478074,0.518305275076852,0.252320850875628,0,1.56449532329816,1.28648187638577,1.38134921352481,0.928735856063958,0,0.354920400119532,0.505754070234305,0.482022059766964,0.661763836394364,0.217879444092406,0,0.404493924480493,0.196221465125346,0,1.4763109092493,2.80483547606892,0.4115740113314,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0.514703430895577,0.109750285408626,1.1240175325762,0.402115889646523,0.185176890317059,0,1.03993478527958,0,0.115930404975077,0,0.288732895522148,0,0.380508304469197,1.58040879591855,0.858486162094873,0,0.468008530278475,0.297262324577456,0,0.335964256397719,0.283550194484773,0.268675568108545,0.871901815541886,0.383382679165211,0,0.528290604079356,1.86595303986695,1.29707958075265,1.38866676769018,0.063497894292169,0.763976851116555,0,3.4214489204541,0.205654985406647,0.600686115687835,0.571652865261156,0.224262168690721,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0.602878754119172,0,0.399891964728228,0,1.00451418286425,0,0,0,0,0,0.410952645100767,0,0.112085143993527,0,0,0.641715181398742,0.254094624222463,0,0,0,1.91381625495949,3.74503511973591,0,0.414415513436035,0,0.500170521059677,0.542530047399471,1.03985430765404,0.713715955188647,0.473107245101804,0.585707074963566,0.601892199455438,2.27407504055985,2.0694614258501,0,0.553107505625109,0.695068915744663,0,0.343143423810856,0,0.862856803274467,0.426910231213777,1.21251028578504,1.66435439510497,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.640695746278505,0.511707249066704,0.64341568457443,0,0.154209693802656,0.532685175939381,0.410635780069046,1.03850885836724,0.813472649219715,0.966875596732978,0.601519410909855,1.01289087829486,0.68888668898764,0.364182336013434,1.18011973463482,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0.261435451024901,0,0.656029291399411,0,0.824328093181778,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0.870036464629098,0.462145851343933,0.307007349452259,0.275673144969061,0.537101224341368,0.290033387828457,0.255679882248303,0.445160178233687,0,0.384380134730212,0,0.2023155617111,0.464845549297286,0,0,0.308033580176089,0,0,0.37064843820784,0,0.372158369359667,0.63275884943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| |||
|short_description=p12@PCBP2 | |||
}} |
Revision as of 13:44, 11 January 2014
Short description: | p12@PCBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PCBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547859, uc001sdj.3, uc001sdk.3, uc010soi.1, uc010soj.1_5end |
EntrezGene: | PCBP2 |
HGNC: | 8648 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 6.69e-10 | 3 |
hair follicle dermal papilla cell | 2.78e-09 | 3 |
stem cell of epidermis | 2.78e-09 | 3 |
endothelial cell of sinusoid | 3.60e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 6.69e-10 | 3 |
dermal papilla | 2.78e-09 | 3 |
papillary layer of dermis | 2.78e-09 | 3 |
dermis | 6.46e-08 | 9 |
dermatome | 6.46e-08 | 9 |
future dermis | 6.46e-08 | 9 |
hepatic sinusoid | 3.60e-07 | 2 |
abdomen blood vessel | 3.60e-07 | 2 |
sinusoid | 3.60e-07 | 2 |
abdominal segment blood vessel | 3.60e-07 | 2 |