FFCP PHASE1:Hg19::chr12:54447868..54447892,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3223,3221 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5128,5126 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=161bp_to_AB464580,CU690682,EU446482,HQ448564_5end | |||
|description=CAGE_peak_6_at_HOXC6_5end,CAGE_peak_7_at_HOXC4_5end | |||
|id=chr12:54447868..54447892,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.03e-17;10!CL:0002567;8.17e-16;3!CL:0000147;1.68e-12;14!CL:0000710;1.39e-08;20!CL:0000075;2.57e-08;27!CL:0002581;9.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.27e-17,10;CL:0000541,1.27e-17,10;CL:0002567,3.69e-16,3;CL:0000147,1.95e-12,14;CL:0000710,1.54e-08,20;CL:0000333,3.06e-08,41;CL:0000075,3.14e-08,27;CL:0002581,7.77e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.80e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1909;7.10e-12;2!DOID:3347;9.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.52e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0003886!5.42e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.12e-08;6!UBERON:0001896;1.07e-07;3!UBERON:0005290;1.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.27e-08,6;UBERON:0001896,5.80e-08,3;UBERON:0005290,5.80e-08,3;UBERON:0010096,5.80e-08,3 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,1.22866968250754,0,0.218441372130172,0.527533956456907,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0.229240217243854,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.939475989150119,1.13311061057692,0.421352420106746,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25381931783988,0.871901815541886,1.15014803749563,0,0,0,0,0,1.0159663086747,1.52795370223311,1.17217447210047,1.71072446022705,1.13110241973656,1.20137223137567,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,4.25547396069835,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,1.42636905040718,0,0,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0.303127571446259,0,0.907170879989041,0.744323423456331,0.306923946576125,0,0.128139149255701,0.511707249066704,0.64341568457443,2.96836132889982,0,0,0.98552587216571,1.03850885836724,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.231046011313244,1.56869953835371,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,1.11937377361089,0.219259876645935,0,0,0,0,0,0.183138929636687,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0.154048617114644,0.767518373630648,0.413509717453592,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.192190067365106,0,0,0,0.94443704049192,0,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0.42793898803392,0,0,0,0.54907405947211,0,0,0,0,0.48763373908959,1.21856744815642,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0.503865495708552,0.306806047506464,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,0.300646838828985,0,0.664653872707185,0.330991955875499,0.941798755221676,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0.397429223405979,0,0,0,0.426905989478705,0.19980960958213,2.88180834308212,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0.262887354279314,0.279282401272254,0.458320848023367,0,0,0,0,0,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.314727528809989,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0.566560457600628,0,0,0.129282956361551,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,1.44207766997908,1.73869928235874,3.597064508342,0,2.72968411574966,2.56918800190471,0,0.936669811613763,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0.466311601748341,0.147855149989634,1.27437413730962,0.449803112163605,0.776314784381297,0.414706207840855,0.53168342911599,1.5652351854352,0.901545653983311,1.14241563650639,0.406870733204662,0.727394636810238,0.644463342254931,0,0.398095888698616,0.800055529326307,0.343395705182793,0,0,0,0.214441591374926,0,0.453411851024545,0.463044948647668,1.46842022703881,0.537266523244462,0,1.53498834705095,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0,0,3.06946491128764,0,0,2.83945059299236,0,0,0.123935764259002,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0.115525666150338,0,2.0710797781803,0.795664888465099,0.752103283492572,1.41193548092464,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,3.87427477967941,0,0,0,0,0,0,3.65263488203798,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0.22910686854405,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,3.29821550236287,0,0.0771741581079447,0.437119121007915,0,0,0,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| |||
|short_description=p6@HOXC6,p7@HOXC4 | |||
}} |
Revision as of 13:48, 11 January 2014
Short description: | p6@HOXC6, p7@HOXC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOXC6_5end, CAGE_peak_7_at_HOXC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 161bp_to_AB464580, CU690682, EU446482, HQ448564_5end |
EntrezGene: | 3223,3221 |
HGNC: | 5126&submit=Submit 5128, 5126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.27e-17 | 10 |
melanoblast | 1.27e-17 | 10 |
light melanocyte | 3.69e-16 | 3 |
pigment cell | 1.95e-12 | 14 |
neurecto-epithelial cell | 1.54e-08 | 20 |
migratory neural crest cell | 3.06e-08 | 41 |
columnar/cuboidal epithelial cell | 3.14e-08 | 27 |
perirenal preadipocyte | 7.77e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brainstem | 1.27e-08 | 6 |
medulla oblongata | 5.80e-08 | 3 |
myelencephalon | 5.80e-08 | 3 |
future myelencephalon | 5.80e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.52e-12 | 2 |