FFCP PHASE1:Hg19::chr12:75889353..75889366,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:75889353..75889366,+ | |||
|id=chr12:75889353..75889366,+ | |||
|ontology_enrichment_celltype=CL:0000048!1.10e-20!430;CL:0000723!2.32e-19!436;CL:0000034!1.11e-17!444;CL:0002057!5.36e-16!42;CL:0002009!1.62e-15!65;CL:0002320!5.06e-15!365;CL:0002194!1.30e-14!63;CL:0000576!1.30e-14!63;CL:0000040!1.30e-14!63;CL:0000559!1.30e-14!63;CL:0000134!6.34e-14!358;CL:0000860!7.59e-14!45;CL:0000766!7.39e-13!76;CL:0002371!9.77e-13!591;CL:0000557!1.57e-12!71;CL:0000839!2.77e-11!70;CL:0000219!5.08e-11!390;CL:0000144!6.78e-11!625;CL:0000738!3.49e-10!140;CL:0002087!5.55e-10!119;CL:0002031!1.91e-08!124;CL:0000680!2.21e-08!57;CL:0000056!2.21e-08!57;CL:0000355!2.21e-08!57;CL:0000055!1.00e-07!180;CL:0000187!2.03e-07!54;CL:0000192!2.21e-07!42;CL:0000514!2.21e-07!42;CL:0000359!9.07e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.96e-07;39!CL:0000234;1.96e-07;39!CL:0000860;2.72e-07;33!CL:0002057;2.72e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.76e-09,48;CL:0000234,4.76e-09,48;CL:0000860,3.03e-08,42;CL:0002057,3.03e-08,42;CL:0000048,1.40e-07,427;CL:0000723,2.90e-07,433;CL:0000766,2.99e-07,72;CL:0000034,7.38e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.18e-09;3!DOID:127;8.18e-09;3!DOID:2394;5.46e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.14e-09,3;DOID:127,8.14e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.89e-19!167;UBERON:0002384!3.07e-15!375;UBERON:0003081!1.41e-12!216;UBERON:0002371!2.09e-12!80;UBERON:0004765!2.23e-12!101;UBERON:0001434!2.23e-12!101;UBERON:0001474!1.11e-11!86;UBERON:0002390!1.31e-11!102;UBERON:0003061!1.31e-11!102;UBERON:0002193!2.14e-09!112;UBERON:0000914!8.90e-08!83;UBERON:0002329!8.90e-08!83;UBERON:0003077!8.90e-08!83;UBERON:0003059!8.90e-08!83;UBERON:0007282!8.90e-08!83;UBERON:0009618!8.90e-08!83;UBERON:0007285!8.90e-08!83;UBERON:0001134!5.58e-07!61;UBERON:0002036!5.58e-07!61;UBERON:0003082!5.58e-07!61;UBERON:0004290!6.79e-07!70;UBERON:0002385!8.73e-07!63;UBERON:0001015!8.73e-07!63;UBERON:0000383!8.73e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.86e-07;33!UBERON:0004571;3.86e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.66e-10,167;UBERON:0000926,2.91e-09,315;UBERON:0004120,2.91e-09,315;UBERON:0006603,2.91e-09,315;UBERON:0004765,1.24e-07,90;UBERON:0004573,1.45e-07,33;UBERON:0004571,1.45e-07,33;UBERON:0002371,3.03e-07,76;UBERON:0003081,4.12e-07,203;UBERON:0001434,4.33e-07,100 | |||
|phase1_expression=0,0,0,2.00146596706261,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0.245733936501509,0,0,0,0.37129905888014,0.662794751455832,6.05092631806598,3.01347264011988,2.19093027116212,1.95173119516203,0,0,0,0.286235987131057,0.821246550437305,0.753255837568817,0.382067028739756,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.80490002723128,0.651032612147555,0.447830948479849,0,0.515151135268373,0.872389432677388,0,0.970336244751265,1.39457422143411,0.822335776043652,1.23882548358041,0,0.768482119587302,0,0.344745680736619,1.93645405075148,4.06279459783025,1.69418105588344,0.545812300115692,0.898893937780338,1.53041946185451,0.320929027076094,0.639337125799041,0.329851300186716,0.797854630486527,0,1.16083695451434,1.70215567407342,1.86846674698672,2.51248665256743,1.0429658368404,0.868755378820466,0.605399502633369,1.84138817993782,1.58231193720442,0.633765858935825,0.425208599930087,0.209658645508376,0.44931452458598,0.901061357049038,0.48217676009124,0.570025487482497,1.39241674039363,0.730656615058536,0,0,1.77901850772711,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0,2.35806457649499,0.616804496998528,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0.328875809207352,0.829050053357545,0,0,0.267540828089713,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0,0,0.604820229674197,1.60464117470104,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0.50133791063589,1.30361867064741,0,0,0.850813354476611,1.99556457716308,1.05401742831751,0,0.364295288292542,0,0,0.348259474598534,0.797747763113191,0.715471872916026,0,0.371457501329565,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0,0,2.43042584364528,0.0892997282840798,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0.886413581652058,0.264818361626438,0.286836620748814,1.06400514659507,0,1.06748995729705,0.49333509683432,0.311211035399766,0.404132016209064,0.653847612453835,0.151357427644931,0,0,0,0,0.597794722207204,0.23486899728753,0.323745888736263,0.280901613404497,0,0.491337269247072,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0.277064115484183,0,1.83892677479412,0.300476117813194,0.340296549480063,0.538168907066586,0.427114777637135,0.211931901159562,1.80054657650641,0.721367704669072,0.515281080091258,0.18611685633159,0.168776332241266,0.584622030967192,0.504867548488229,0.0920498986422993,0.161646056818812,1.06502877754984,1.41052937518696,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,1.92972281457866,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,5.77325368101093,0.115930404975077,0.234817388471643,0,0,0,0,0,0.492434012174795,1.17002132569619,0.445893486866185,0,1.34385702559088,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,0.904318131178758,0.871533458600294,0.699810938274399,0,0,2.10833939483032,0.239624855491583,0,0,0.868687840005475,3.49309748335652,0.179060963239896,0.224170287987055,0.197030760201927,1.2937654491571,0.128343036279748,0,0,0,0,0,2.99602809578873,17.9496875522415,0.414415513436035,0.49076596687656,1.00034104211935,2.44138521329762,1.66376689224646,11.4194552830184,0.473107245101804,0.819989904948992,0,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0,0,0,1.50999940573032,0.320182673410333,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0,0,0.482561763430822,0,1.23367755042124,0,0.246381468041427,2.59627214591811,0.813472649219715,0,2.00506470303285,0,0.574072240823034,1.0925470080403,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0,0.462145851343933,0.307007349452259,0.275673144969061,0.322260734604821,0.290033387828457,0.511359764496605,0.178064071293475,0.165284915360978,0.768760269460425,0.127612712494584,0,0.464845549297286,0.94443704049192,0,0,0.532306030317022,0,0,0.429374660225974,0,0.632758849437452,0.190630193923825,0,0,0.318203247925937,1.56989728039846,0.359744915166629,1.09814811894422,0.353437207037059,0.404364963146632,1.58510321173008,1.68503382495592,0,2.68084838594413,0,0.409499734223957,0.565621727814851,0,0,1.99031692572366,1.75380354101505,0,0.655894752046633,0.202910376962704,0.30982349809975,1.40847801266121,0.573645408816206,0.392996164052485,0.7133421029625,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,2.27858874869665,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0.307240764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| |||
|short_description=p@chr12:75889353..75889366,+ | |||
}} |
Revision as of 14:45, 11 January 2014
Short description: | p@chr12:75889353..75889366, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr12:75889353..75889366, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.76e-09 | 48 |
phagocyte | 4.76e-09 | 48 |
classical monocyte | 3.03e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-08 | 42 |
multi fate stem cell | 1.40e-07 | 427 |
somatic stem cell | 2.90e-07 | 433 |
myeloid leukocyte | 2.99e-07 | 72 |
stem cell | 7.38e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.66e-10 | 167 |
mesoderm | 2.91e-09 | 315 |
mesoderm-derived structure | 2.91e-09 | 315 |
presumptive mesoderm | 2.91e-09 | 315 |
skeletal element | 1.24e-07 | 90 |
systemic artery | 1.45e-07 | 33 |
systemic arterial system | 1.45e-07 | 33 |
bone marrow | 3.03e-07 | 76 |
lateral plate mesoderm | 4.12e-07 | 203 |
skeletal system | 4.33e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.14e-09 | 3 |
leiomyoma | 8.14e-09 | 3 |