FFCP PHASE1:Hg19::chr12:104742890..104742915,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:104742890..104742915,+ | |||
|id=chr12:104742890..104742915,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.39e-11!682;CL:0000548!1.54e-11!679;CL:0000004!1.54e-11!679;CL:0000255!1.54e-11!679;CL:0000077!1.30e-10!19;CL:0000003!2.76e-08!722;CL:0000144!9.92e-08!625;CL:0000220!7.43e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.07e-19;19!CL:0002622;1.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.22e-19,19;CL:0000213,1.80e-08,58;CL:0000215,1.80e-08,58;CL:0002622,1.65e-07,3;CL:0000222,5.26e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.50e-08;3!DOID:127;4.50e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.39e-08,3;DOID:127,4.39e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.07e-08;9!UBERON:0000042;3.07e-08;9 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,2.5692062866918,0.422863212287913,8.00586386825043,3.12872766099101,2.61701557230111,0,1.26343974685366,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,2.01697543935533,1.20538905604795,0.730310090387373,1.95173119516203,0,0,0,0.286235987131057,0,0.251085279189606,0,0,0.0787107813136792,0.393364276848904,0,0,0,0,0.369754010166788,0.154934401160603,0,0,0,0,0,0,0.32389366601898,0,0.436194716338694,0.377875943688809,0,0.697287110717054,1.23350366406548,1.54853185447552,0.863077176966451,1.0246428261164,0.47296445977717,0.344745680736619,0,0,0.752969358170419,0.545812300115692,0.898893937780338,0.612167784741805,0.641858054152187,0.639337125799041,1.64925650093358,1.19678194572979,0.426224750532694,0.870627715885752,2.26954089876456,0,1.00499466102697,0.521482918420201,1.08594422352558,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0.25618263945135,0,0,0,0.579606171470105,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.895037932904712,0,0.50133791063589,1.01392563272577,0,0,0,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0,0.696518949197069,0.531831842075461,0,0,0,0,0,0,0,0.419499436209906,1.6507082516404,0.626984899610432,0.775250277507987,1.06729878806013,0.66944122552934,0.805658634218294,1.52054421143703,0.24406205754817,0,0.81014194788176,0.357198913136319,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0.886413581652058,0.926864265692532,0.860509862246441,0.354668382198357,1.68203280042692,0,0.74000264525148,0,0.942974704487816,1.14423332179421,0,0,0,0.312160076830321,0,1.04614076386261,0.469737994575059,0.647491777472526,0.140450806702248,0.204154171254893,0.368502951935304,0.206651562351531,0,1.7308685049499,0,0,0.673344455816265,0.375355559615893,0,0.438977620880838,0.919463387397059,0.600952235626387,0.907457465280168,0.538168907066586,0.213557388818567,0.211931901159562,0,0,0.772921620136887,0.37223371266318,0,0.876933046450788,0.252433774244115,0.276149695926898,0.646584227275248,0.710019185033229,0.201504196455281,0.169560592310488,0.386521706326594,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0.72995471815166,0,1.28648187638577,0,2.78620756819187,1.44375896333917,1.8929088006375,1.01150814046861,1.68707720918437,2.09558548191549,0.653638332277218,0.71181185733329,0.808987848960987,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.343135620597051,0.109750285408626,0,0.804231779293047,0.0925884451585296,0,0,1.44331342025273,0,0.234817388471643,0.433099343283221,0.925971025153221,0.190254152234598,0,0,0,0.702012795417713,0.148631162288728,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0,0,0.22001485746285,0,0,0,0.531876233169741,1.04007436911366,0,0,0,1.28680194292333,0,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0.871533458600294,1.89948683245908,1.2162378064119,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.868687840005475,0,0.179060963239896,0,0,0.215627574859517,0,0.254094624222463,0,1.54657762555539,0,1.27587750330633,0,2.99161459204025,0,0.36807447515742,0.500170521059677,0.542530047399471,2.9115920614313,3.03329280955175,1.73472656537328,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0.213455115606889,0,1.66435439510497,0,0.992431231275107,0.460385919864187,0.280660094433074,1.02511319404561,0,1.12597744800525,1.48418066444991,0.308419387605311,0.710246901252508,0.0821271560138091,0,0.464841513839837,0.362578348774867,0.40101294060657,0,1.14814448164607,2.91345868810747,3.01586154406675,0,0.616122696835318,0,0,1.05551628892876,0,0.510281115829547,0,0,0,0,0,0,0,0,0,1.53870075069834,0,0,0.103041011647722,0.54941678891006,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0.330569830721956,0,0,0.10115778085555,1.85938219718914,0.62962469366128,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0,0,0,0.719489830333259,1.09814811894422,0.706874414074119,0.202182481573316,3.17020642346017,0,0,0.731140468893853,0,0.545999645631943,1.55545975149084,0,0,1.32687795048244,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.35667105148125,1.06428319221179,1.68886108238131,1.31717957183961,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0.79312517629427,0.854592569019785,0,0,0.557409525377156,0,0.0711418433484141,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.306806047506464,0,1.86623752597084,0.089868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| |||
|short_description=p@chr12:104742890..104742915,+ | |||
}} |
Revision as of 15:36, 11 January 2014
Short description: | p@chr12:104742890..104742915, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:104742890..104742915, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.22e-19 | 19 |
lining cell | 1.80e-08 | 58 |
barrier cell | 1.80e-08 | 58 |
prostate stromal cell | 1.65e-07 | 3 |
mesodermal cell | 5.26e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.39e-08 | 3 |
leiomyoma | 4.39e-08 | 3 |