FFCP PHASE1:Hg19::chr13:100634111..100634118,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12873 | |||
|TSSclassifier=strong | |||
|UniProt=O95409 | |||
|association_with_transcript=85bp_to_ENST00000376335,NM_007129_5end | |||
|coexpression_cluster_id=C1375 | |||
|description=CAGE_peak_8_at_ZIC2_5end | |||
|id=chr13:100634111..100634118,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.43e-07!5;CL:0002319!1.65e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.49e-15;2!CL:0002379;1.97e-08;1!CL:0000669;3.23e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,8.66e-16,2;CL:0002379,1.18e-08,1;CL:0000669,2.47e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.77e-23;3 | |||
|ontology_enrichment_disease=DOID:162!6.14e-31!235;DOID:14566!1.31e-29!239;DOID:0050687!2.96e-27!143;DOID:305!7.68e-17!106;DOID:1115!1.54e-09!20;DOID:0050686!2.49e-08!137;DOID:171!5.17e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3371;6.49e-09;1!DOID:4549;6.49e-09;1!DOID:5861;6.49e-09;1!DOID:6496;6.49e-09;1!DOID:3620;1.97e-08;1!DOID:3565;1.97e-08;1!DOID:3347;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.50e-09,1;DOID:4549,6.50e-09,1;DOID:5861,6.50e-09,1;DOID:6496,6.50e-09,1;DOID:3620,1.18e-08,1;DOID:3565,1.18e-08,1;DOID:3347,1.37e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.28e-15!82;UBERON:0000073!7.73e-15!94;UBERON:0001016!7.73e-15!94;UBERON:0005743!1.12e-14!86;UBERON:0000955!7.61e-13!69;UBERON:0006238!7.61e-13!69;UBERON:0002616!3.97e-11!59;UBERON:0002346!5.09e-11!90;UBERON:0001049!4.20e-10!57;UBERON:0005068!4.20e-10!57;UBERON:0006241!4.20e-10!57;UBERON:0007135!4.20e-10!57;UBERON:0004733!7.83e-10!12;UBERON:0002028!7.83e-10!12;UBERON:0007277!7.83e-10!12;UBERON:0003075!7.10e-09!86;UBERON:0007284!7.10e-09!86;UBERON:0004732!7.46e-09!13;UBERON:0001737!7.97e-09!9;UBERON:0000924!8.36e-09!173;UBERON:0006601!8.36e-09!173;UBERON:0002037!1.27e-08!6;UBERON:0006215!1.27e-08!6;UBERON:0000033!3.72e-08!123;UBERON:0003076!2.67e-07!15;UBERON:0003057!2.67e-07!15;UBERON:0004121!2.91e-07!169;UBERON:0000153!3.04e-07!129;UBERON:0007811!3.04e-07!129;UBERON:0002680!4.02e-07!9;UBERON:0001895!4.02e-07!9;UBERON:0010092!4.02e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.69e-20;6!UBERON:0004733;3.37e-15;12!UBERON:0002028;3.37e-15;12!UBERON:0004732;5.12e-14;13!UBERON:0002680;1.96e-13;9!UBERON:0001895;1.96e-13;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-20,6;UBERON:0006215,2.83e-20,6;UBERON:0004733,2.55e-15,12;UBERON:0002028,2.55e-15,12;UBERON:0007277,2.55e-15,12;UBERON:0004732,3.97e-14,13;UBERON:0002680,1.41e-13,9;UBERON:0001895,1.41e-13,9;UBERON:0010092,1.41e-13,9;UBERON:0003076,3.22e-12,15;UBERON:0003057,3.22e-12,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,1.88072832886853,0.85870796139317,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,1.72288698817931,1.2781333715647,0.932949495138334,0.756962552626885,0.72995471815166,0,0,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.220587945464788,0.653638332277218,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76221041716467,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824125183365091,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,2.88743956579008,0,0,0,0.142283686696828,0.797131363644112,0,0,0.211673582723883,0,0,1.14117339516596,0,0,1.01575066680962,0,0,0,0,0.921722292925374,0.671028323677248,1.33479313369527,0,0.556812347790485,0,2.16364542780786,0,0,0.37428108081644,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.716084698702437,0,0,0,0,0,0.185536196323703,0,0,0,0,1.0241410345695,0.762760950878299,0,0,0,0.173624994933292,0,0,7.62908681585416,2.87506075821184,7.09314285488514,0.219385397153973,0.32681539055697,0.278847488557207,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0.225595660617181,0.588187602953219,1.00692952185506,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.568679216656392,0.150323419414493,0.414752765588989,0.664653872707185,0.661983911750998,0.627865836814451,0,0.853828638089378,0.277349346026277,0,0.0979923974143777,0.34823682632161,0,0.687944129886466,0.580537987734511,0.584714536689484,0.492692742319255,0,3.70675732104301,0.225980740780532,0.411125773940253,0.397429223405979,0.126621591911757,0,0.320635281006135,0,0.19980960958213,0.72045208577053,0.114536596165916,0,0,0.621262677827163,0.235694034616795,0.271808412147228,0.732219924186332,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0.408610218334727,0.964518890790115,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0,0,0.211200673038813,0.35857467866569,1.34340638123612,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0.1251909307065,1.14681839138014,0.443716206147409,0.248385611765534,0,0.499921631848426,0,0,1.6468607378872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,1.30497145982606,0.680117776536817,0.231522474323834,0,0.179088841081487,0,0,0.353378291891762,0,0.168942440653073,1.02496607435179,1.0362910251936,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0.786329709279482,0.873677105536111,0.33946505990805,0.637724760305049,0.495743057036009,0.558644917973244,0,0.70975570501128,0,0,0,0,0,0.319267718114302,0.205116364240755,0.252071696221718,0.345786262321089,0.322951291263702,0,0.294443155503077,0.707818340086442,0.550285795565037,1.03973099535304,0,1.3807198521202,0.596748666348824,0,0.20170506870352,0,0,0.655087670040387,0.147856086217045,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0,0.879356221798103,0.894336993477167,0,0,0,0,0,0,0,0.679697329768317,0.263091094251396,0,0,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0.697448552208751,0.347716544605159,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0.559277158988962,0,0,0,0,0,0,0.935757853848423,0,0.118920090777569,0.11294608203896,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.286679166302903,1.10440093535229,0.407948941145488,0,0,0,0,0,1.64016352285603,0,0,0,0.801652215796681,0.0918948995348449,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,1.07790242527904,0,0,0,0,0,0 | |||
|short_description=p8@ZIC2 | |||
}} |
Revision as of 18:28, 11 January 2014
Short description: | p8@ZIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ZIC2_5end |
Coexpression cluster: | C1375_cerebellum_Pericytes_extraskeletal_neuroblastoma_teratocarcinoma_neuroectodermal_H9 |
Association with transcript: | 85bp_to_ENST00000376335, NM_007129_5end |
EntrezGene: | ZIC2 |
HGNC: | 12873 |
UniProt: | O95409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 8.66e-16 | 2 |
meningothelial cell | 1.18e-08 | 1 |
pericyte cell | 2.47e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-20 | 6 |
rhombic lip | 2.83e-20 | 6 |
segmental subdivision of hindbrain | 2.55e-15 | 12 |
hindbrain | 2.55e-15 | 12 |
presumptive hindbrain | 2.55e-15 | 12 |
segmental subdivision of nervous system | 3.97e-14 | 13 |
regional part of metencephalon | 1.41e-13 | 9 |
metencephalon | 1.41e-13 | 9 |
future metencephalon | 1.41e-13 | 9 |
posterior neural tube | 3.22e-12 | 15 |
chordal neural plate | 3.22e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.50e-09 | 1 |
extraosseous chondrosarcoma | 6.50e-09 | 1 |
myxoid chondrosarcoma | 6.50e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 6.50e-09 | 1 |
central nervous system cancer | 1.18e-08 | 1 |
meningioma | 1.18e-08 | 1 |
osteosarcoma | 1.37e-08 | 1 |