FFCP PHASE1:Hg19::chr14:50234370..50234434,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23588 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20231 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2U9 | |||
|association_with_transcript=44bp_to_ENST00000298307_5end | |||
|description=CAGE_peak_2_at_KLHDC2_5end | |||
|id=chr14:50234370..50234434,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.88e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.45e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!5.77e-11!42;UBERON:0002780!1.37e-10!41;UBERON:0001890!1.37e-10!41;UBERON:0006240!1.37e-10!41;UBERON:0002616!5.48e-10!59;UBERON:0001893!5.95e-10!34;UBERON:0001869!6.42e-10!32;UBERON:0002020!1.18e-09!34;UBERON:0003528!1.18e-09!34;UBERON:0005743!1.27e-09!86;UBERON:0001049!1.83e-09!57;UBERON:0005068!1.83e-09!57;UBERON:0006241!1.83e-09!57;UBERON:0007135!1.83e-09!57;UBERON:0002791!1.90e-09!33;UBERON:0000955!2.22e-09!69;UBERON:0006238!2.22e-09!69;UBERON:0002619!3.57e-09!22;UBERON:0001017!7.46e-09!82;UBERON:0001950!8.83e-09!20;UBERON:0000073!1.45e-08!94;UBERON:0001016!1.45e-08!94;UBERON:0003056!2.51e-08!61;UBERON:0002346!1.06e-07!90;UBERON:0003075!1.07e-07!86;UBERON:0007284!1.07e-07!86;UBERON:0000956!2.45e-07!25;UBERON:0000203!2.45e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.11e-10;22!UBERON:0001950;1.13e-09;20!UBERON:0001869;2.56e-09;32!UBERON:0001893;7.96e-09;34!UBERON:0002791;8.23e-09;32!UBERON:0003528;1.10e-08;34!UBERON:0002020;1.10e-08;34!UBERON:0002780;6.93e-08;41!UBERON:0001890;6.93e-08;41!UBERON:0000956;1.46e-07;25!UBERON:0000203;1.46e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,6.48e-11,41;UBERON:0001890,6.48e-11,41;UBERON:0003080,6.48e-11,41;UBERON:0006240,6.48e-11,41;UBERON:0000955,2.07e-10,68;UBERON:0006238,2.07e-10,68;UBERON:0001893,3.21e-10,34;UBERON:0001869,3.59e-10,32;UBERON:0003528,6.63e-10,34;UBERON:0002020,6.63e-10,34;UBERON:0000073,7.20e-10,53;UBERON:0002616,7.20e-10,53;UBERON:0002619,8.76e-10,22;UBERON:0002791,9.64e-10,32;UBERON:0001049,1.04e-09,56;UBERON:0005068,1.04e-09,56;UBERON:0006241,1.04e-09,56;UBERON:0007135,1.04e-09,56;UBERON:0001017,1.68e-09,81;UBERON:0001950,2.34e-09,20;UBERON:0001016,1.72e-08,89;UBERON:0003056,2.95e-08,61;UBERON:0003075,3.68e-08,82;UBERON:0007284,3.68e-08,82;UBERON:0002346,4.67e-08,86;UBERON:0000956,2.11e-07,25;UBERON:0000203,2.11e-07,25 | |||
|phase1_expression=5.4503513781167,4.06790995392868,8.17535543756633,4.00293193412522,7.15137751083661,6.10636966870258,2.53299878168311,1.89515962028049,2.35067065379855,0.245733936501509,0.697801167972428,1.96597234917155,2.63766978228454,1.98026164736075,1.65698687863958,0,1.80808358407193,2.92124036154949,0.975865597581014,0.61560529038394,0,0.313454721478088,0.572471974262113,0.958120975510189,0.502170558379211,0.534893840235659,0.985207073399349,0.708397031823113,0.786728553697808,0.383829398097213,0.464448369948228,0.919421224478927,1.8072355126695,0,0.619737604642413,0.426507697462265,5.28480790802725,1.10799081706375,1.60435557976113,1.08505435357926,1.56740831967947,0.647787332037959,1.80302897343931,1.01778767145695,0.377875943688809,0.970336244751265,0,0.411167888021826,0.929119112685311,0.28769239232215,0,0.47296445977717,1.03423704220986,0,0,0.564727018627814,0.272906150057846,0,0.612167784741805,0.962787081228281,1.27867425159808,0.659702600373432,0.199463657621632,0.852449501065388,0,0,0,0.75374599577023,0,0.434377689410233,0.605399502633369,0,0.316462387440884,2.32380814943136,1.27562579979026,1.46761051855863,0.786300418025466,1.20141514273205,1.12507910687956,3.42015292489498,4.17725022118089,1.64397738388171,0,0.546138611262131,0.889509253863555,2.98711155796555,1.60158394814405,3.4485146397269,0,1.90810750907073,1.70763890732835,6.45960908308033,1.14681968437569,2.64342657158052,1.68152568894461,3.16060901730092,3.540775862049,1.57204305099666,2.87842098599313,2.17342444007882,0.977766799900771,0.946895611469467,1.94826728407911,2.67385096524417,0.589211814949674,0.664601683750863,0.812411591295047,1.79327847615945,1.30059347559878,0.657751618414705,0.552700035571697,1.15921234294021,1.63115219478266,1.87278579662799,1.04535523804977,1.24640276967323,1.91610246800961,1.03088233644789,0.759059076058509,1.27426165729639,0,1.90090408889675,0.752875595388864,0.255973222308837,0,0.710331756132051,0,2.01606743224732,1.87208137048455,2.75166367377318,4.87613732627923,3.35350429851818,1.02290049474824,0.722878304769133,3.50936537445123,1.59331170856906,0.795285947051099,1.45990461090791,0.567208902984407,1.33037638477538,1.05401742831751,2.16115474571226,0,0.370784442784429,1.62273696827342,0.174129737299267,0.398873881556595,4.76981248610684,6.29194401858141,2.60020250930695,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,1.42306505074684,1.33888245105868,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0.22452937262617,0.563057402416611,1.53316637465883,0,0.549605231791222,1.31780417436063,0,0.436094052142534,2.98183171017191,2.15271869829786,4.10468460520978,2.0078563452417,1.41867352879343,0.560677600142307,0,2.71334303258876,2.48968828319813,1.21239604862719,2.45192854670188,0.454072282934794,3.45705554687999,0,1.24864030732128,1.1409436430889,1.04614076386261,0.587172493218824,0.323745888736263,0.842704840213491,0.408308342509787,0.737005903870608,1.44656093646072,0,0.741800787835671,0,1.43723628363248,0.505008341862199,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.600952235626387,1.58805056424029,1.97328599257748,1.92201649936711,1.27159140695737,0.900273288253207,0.824420233907511,4.3798891807757,1.8611685633159,2.53164498361899,1.16924406193438,3.02920529092937,1.47279837827679,0.646584227275248,2.4850671476163,0.705264687593482,1.01736355386293,1.73934767846967,0.272746120590835,1.14721838155602,1.70763188581434,1.19276791489337,1.74290914304278,1.34759371519982,1.26160425437814,0.36497735907583,1.56449532329816,0.643240938192885,5.52539685409922,2.3218396401599,4.33127689001751,1.18306800039844,1.68584690078102,1.44606617930089,2.64705534557745,1.74303555273925,1.89816495288877,2.56179485504312,1.56977172100277,1.15424147083917,0.738155454624648,1.40241773803446,2.057870056657,0,2.53510069643662,2.94848165003288,4.72631925345123,2.6487785964879,4.91953754172454,1.20097467208968,1.42675371031213,0,0.402115889646523,0.555530670951178,0.325808305310325,0,1.44331342025273,1.27523445472584,2.11335649624479,0.577465791044295,0.925971025153221,0.570762456703795,0.790204397959275,0.858486162094873,1.72351904261178,1.17002132569619,1.78357394746474,0.93733833986777,1.51183915378974,1.41775097242386,0.806026704325635,0.871901815541886,1.91691339582606,0,2.55340458638356,1.03664057770386,1.29707958075265,0.25248486685276,2.53991577168676,1.14596527667483,2.34434894420094,1.71072446022705,2.67351481028641,3.00343057843917,4.0015700568281,1.68196626518041,1.74384027533312,1.24675085895615,4.39523833576444,0,0,1.32969058292435,4.16029747645464,0.514414748524284,0,0,1.42977993658148,3.25572963234866,0,1.62868092146868,1.06617584622764,1.58390374586686,0.602878754119172,0.871533458600294,0.899756920638513,0,3.01354254859276,6.32501818449095,4.55287225434007,1.14861935834114,1.42636905040718,1.44781306667579,1.43833425785268,3.22309733831812,0.336255431980582,1.97030760201927,3.66566877261179,2.18183161675572,1.01637849688985,0,0.773288812777695,1.00509759200609,1.91381625495949,0,0,1.24324654030811,1.10422342547226,2.00068208423871,1.35632511849868,2.07970861530807,2.14114786556594,2.83864347061082,1.17141414992713,0.902838299183157,2.27407504055985,4.1389228517002,0,1.65932251687533,1.39013783148933,0.587403472388222,0.686286847621712,1.24060815673732,1.07857100409308,1.70764092485511,0.909382714338778,1.66435439510497,1.5119514666484,7.69134204238208,8.13348458426731,4.49056151092918,6.66323576129645,4.60536524160033,5.14732547659544,5.93672265779964,1.23367755042124,1.77561725313127,1.88892458831761,2.07701771673448,2.09178681227927,3.38406458856542,1.00253235151642,0,1.49258782613989,0.910455840033585,2.09799063935079,0,1.00119938235739,0,0,1.05551628892876,0,0.340187410553031,0.431831832204279,6.16909010761157,0.270946437543853,0,0.509752546090077,0,0.671624264166535,0.657779629937804,1.5686127061494,2.05160100093111,2.29610251989794,1.30151357865721,1.44257416306811,0.457847324091717,0.660075999364704,0,0,1.6068392984416,1.54673149267395,1.54048617114644,1.68854042198743,1.24052915236078,1.82614416276065,1.30515024522806,1.27839941124151,2.49289699810865,0.661139661443912,0.768760269460425,2.4246415373971,0.30347334256665,1.39453664789186,1.5740617341532,0.6970372701606,1.23213432070436,1.06461206063404,0,1.11194531462352,1.14499909393593,2.232950216158,2.21465597303108,2.09693213316207,0.511795582622668,3.42351190427136,2.86382923133343,2.35484592059769,1.07923474549989,1.92175920815238,0.942499218765491,0.404364963146632,0,0.842516912477962,0.48763373908959,0.487426979262569,1.05650146756755,0.545999645631943,0.707027159768564,1.13008116620243,4.96228809191512,2.65375590096488,0.438450885253763,3.47265320560013,2.62357900818653,0.811641507850816,0.6196469961995,0.281695602532241,0.717056761020258,1.3754865741837,0.35667105148125,0.709522128141196,2.53329162357197,0.658589785919804,0.75894634753143,0.349934720244983,0.769776901804097,1.34060455107157,2.17781969722645,1.60044461320525,0.86101074534246,0,0,1.60806380144872,0.507447609232169,0.764637207142375,0.569647187174163,0.714695326373367,0,0,0.540031437238115,0,1.70918513803957,0,2.45040215981032,0.185803175125719,1.58696134274089,0.426851060090485,0.637705090915289,1.1974762285969,0.957526850661834,1.48171507906718,2.27235358192189,2.52717460302113,3.65175486453108,0.94007937463814,2.50634477090067,1.35433422241283,1.605880751037,1.81619736471943,0,1.03051603426729,0.307240764308458,0.447352215784832,1.50164227540718,1.17232857241224,0.278406173895242,0,1.6227340708559,0.66614393599564,1.4098700508785,1.30998378285754,1.90460633053462,0.728163130497081,0.557216921387392,0.568272293612826,1.90995587790152,0.890894042497916,1.53580351049616,2.98244294329889,1.96937182974718,0.667852230137435,0.988823245360557,1.26675244876796,1.59398390600856,0.552567831062295,14.1082338798395,1.84083628503879,0.984678443688556,0.933118762985422,0.359473404589307,0.537063524026827,2.55786185113436,0.591860433821602,0,0,1.93866549219044,3.15411533750294,1.99613798001194,0.520855522170466,1.92411999991631,2.89999830173917,2.27586896570999,1.27126825146383,1.89110145414349,1.37897349296586,2.91604613383254,2.43074992906609,7.97167247232455,2.89431452700979,4.5774520895125,1.76926815889959,0,2.19385397153973,0.32681539055697,0.41827123283581,0.692552326534174,0.569710279235006,0.23056390438806,0.807818799687949,2.28159481036217,0.957003479195758,0.549585560411174,2.13213910407454,2.04386596391473,0.470940769185074,1.66211681900156,0.451191321234361,0.784250137270958,0.335643173951685,0.569261198172555,0.794682894901893,0.421996129056054,2.77495773870551,3.95788600015034,0.865554558968364,0.995261931078505,1.14994833854341,1.83309043480088,1.77912677208373,1.85345908419754,1.77517314159274,1.48282492557489,1.60515529459758,2.57690890297873,1.094728735294,0.586993856796269,2.18502341580683,1.97292201424695,7.25944296291983,1.22429104652196,1.5796644907122,3.00646838828985,3.42171031610916,0.664653872707185,0.661983911750998,0.627865836814451,0,0.284609546029793,0.416024019039416,0.867798691675654,0.293977192243133,0.69647365264322,2.79562669187248,1.54787429224455,2.22539561964896,3.43519790305072,1.56019368401098,1.06687918137261,0.617792886840502,2.48578814858586,0.548167698587004,0.397429223405979,4.93824208455854,1.17330829640882,0.561111741760736,1.92107695265417,2.19790570540343,1.58499458869517,0.687219576995494,6.34901492089269,1.00838358591705,0.99402028452346,0,0.135904206073614,0.104602846312333,0.203996435272644,2.60055530911367,3.00210144354895,1.36905378891993,0,1.28929632425987,0.788662062837943,2.51354161145029,2.06244381610515,0.717873024576814,2.59582700648688,1.71690419254628,1.33902874465124,1.47803639470798,1.80149941771202,3.49487848582361,3.23011047459617,3.29663433524666,2.76354529802158,2.55911451938347,0.508039992394707,3.18091875923721,1.63444087333891,2.89355667237035,1.51293380256957,0.83088067605837,0.449947783103001,6.96421759102155,3.64497339948148,3.01891218839339,0.86686278029118,1.10154635083496,0.950403028674658,1.6135860539956,0.767660789277781,2.1440859791201,1.98627591109629,0,2.17199840701485,1.72844298240254,0,4.7892076624995,1.23138781124008,1.02232813071253,2.15292973888239,2.34483573884932,3.97520666736664,1.42211251997706,2.24795422962573,0.855434189421647,0,0.533937062838473,1.10043013569766,2.48543433208317,1.48849806543585,0.790446527591777,0.852548188666271,0.638341257770182,1.08803560673895,2.506898940227,2.75711019087115,3.93447156851765,0.628216385000937,6.2024772597689,5.12510312588245,4.256491644021,2.86704597845036,1.33114861844223,1.24192805882767,1.93688088910723,0.124980407962107,0.454947352624943,0.285465333544967,0.235265819698172,0,2.60857851499485,1.49254802886874,1.63599316893057,5.54805861502613,0.568209015825267,2.26411111577318,2.66943366478961,0.686520205190771,2.7221566277383,2.95330681107283,2.06997209985487,0.63718706865481,0.449803112163605,0.776314784381297,0,1.06336685823198,0.521745061811734,0.901545653983311,1.14241563650639,0,1.63663793282303,2.25562169789226,4.17630383890644,0.398095888698616,0.800055529326307,2.06037423109676,1.6837474438296,0,0.57785949122191,1.71553273099941,1.04397716786085,0.453411851024545,0.463044948647668,0.734210113519403,1.96997725189636,0.617602894321944,2.19284049578707,1.06013487567529,0.38582807654183,0.337884881306145,0.256241518587947,3.10887307558079,1.82315973706429,4.00949464840019,0.389720617678777,0.797189041880179,0.817826971279221,0.655219697692825,3.19504781379835,0.211312123358627,2.19986135440423,0.853533837553127,0,1.13503190713367,2.57748330352577,0.279759015438889,0.622077260032973,0.511577485214607,2.372145850727,0.629063767423586,1.09209638192014,2.20652288940233,0.850299680406731,4.70955904184208,1.11728983594649,1.90802610392051,2.12926711503384,0.80057074828547,2.1160556621441,1.8374728641192,3.85375350578757,12.7526918693026,3.35231104020018,4.71767637753736,1.00828678488687,3.59617712813933,2.74508597574147,0,1.07962490351128,0.589848616738702,2.93485757634686,1.27078232765372,0.762764190934334,0,1.98916222116275,0.526472298444801,1.41193548092464,0.781514011233092,1.83334686136996,0.982631505060581,1.33070477595341,4.59255575405084,2.34323429584154,3.30698874401895,4.05861185241004,0.546974809018219,3.83780436800028,0.992422356778588,0.351742488719241,0.766574565837572,0.535701835878287,1.00885116665647,4.85572483389305,2.27662191351298,0.620916591138472,0.115233987555779,0.514464028312255,2.7867590520501,4.73563969652513,3.78220290828698,1.11231401892069,1.33438257845874,2.98519620840404,0.840816489941367,2.73947616152849,0.215927591218621,0.47775168788705,4.93188154818929,7.1106125279727,0.348724276104376,0,0,1.03608082081518,2.21934020222135,0,1.29068207646083,1.18332000730565,1.27820107138737,1.27016115057279,2.52017555398455,0.31020638566432,0,1.11855431797792,0.196300467230486,1.09726132484042,0.647428837187895,0.410651227424988,0,2.4285549652957,1.87151570769685,2.98426162742052,0.83244063544298,0.45178432815584,0.549702583727146,0.754814217833368,0.926089897295336,8.52382285965433,1.88126918544609,1.47088993052343,0.235676547101626,0.785233868459781,2.37637120261669,1.6906229103336,1.52934403219035,0.939839179798536,0.515663103788617,0.199882311849858,0.535661815816973,1.76447435857846,0.401206833445841,1.46067277649303,0.458729283404541,1.86341458096887,2.52434499509095,4.82739580355494,1.74540276136151,3.1741610430924,1.11598505450025,1.38652688589425,1.73050624849516,1.13549782351571,0.655593431782173,4.94124153944604,0.815910637935854,0.534434810531121,1.19463369395298,0.250707539292375,1.36401656792831,2.41167717140561,3.31667775783512,1.75836092965222,1.70587185520785,1.90451545170992,0.452122368852043,0.434523000071005,1.00918676322552,1.0820016907288,3.03175783437329,2.61260097476354,1.71116650542641,0.5388164241167,0.78894425931944,0.665320713092027,0.407016343054873,1.92109222579888,1.9307228228694,1.16772762738563,4.69281884806909,0.733448665097199,1.62758471326295,1.33151354837103,0.402547587182052,1.60284246151616 | |||
|short_description=p2@KLHDC2 | |||
}} |
Revision as of 19:58, 11 January 2014
Short description: | p2@KLHDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLHDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000298307_5end |
EntrezGene: | KLHDC2 |
HGNC: | 20231 |
UniProt: | Q9Y2U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.45e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 6.48e-11 | 41 |
forebrain | 6.48e-11 | 41 |
anterior neural tube | 6.48e-11 | 41 |
future forebrain | 6.48e-11 | 41 |
brain | 2.07e-10 | 68 |
future brain | 2.07e-10 | 68 |
telencephalon | 3.21e-10 | 34 |
cerebral hemisphere | 3.59e-10 | 32 |
brain grey matter | 6.63e-10 | 34 |
gray matter | 6.63e-10 | 34 |
regional part of nervous system | 7.20e-10 | 53 |
regional part of brain | 7.20e-10 | 53 |
regional part of cerebral cortex | 8.76e-10 | 22 |
regional part of telencephalon | 9.64e-10 | 32 |
neural tube | 1.04e-09 | 56 |
neural rod | 1.04e-09 | 56 |
future spinal cord | 1.04e-09 | 56 |
neural keel | 1.04e-09 | 56 |
central nervous system | 1.68e-09 | 81 |
neocortex | 2.34e-09 | 20 |
nervous system | 1.72e-08 | 89 |
pre-chordal neural plate | 2.95e-08 | 61 |
neural plate | 3.68e-08 | 82 |
presumptive neural plate | 3.68e-08 | 82 |
neurectoderm | 4.67e-08 | 86 |
cerebral cortex | 2.11e-07 | 25 |
pallium | 2.11e-07 | 25 |