FFCP PHASE1:Hg19::chr14:106320578..106320592,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-77bp_to_J00258_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_5_at_IGHM_5end | |||
|id=chr14:106320578..106320592,- | |||
|ontology_enrichment_celltype=CL:0000945!3.22e-58!24;CL:0000826!3.22e-58!24;CL:0000236!5.34e-36!14;CL:0000542!2.55e-25!53;CL:0000051!2.55e-25!53;CL:0000838!2.03e-23!52;CL:0002087!6.39e-16!119;CL:0000037!5.14e-13!172;CL:0000566!5.14e-13!172;CL:0000738!2.37e-12!140;CL:0000988!8.24e-12!182;CL:0002031!1.45e-11!124;CL:0002032!4.33e-11!165;CL:0000837!4.33e-11!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.56e-94;24!CL:0000236;2.27e-66;13!CL:0000542;2.85e-31;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.43e-94,24;CL:0000826,2.43e-94,24;CL:0000236,1.38e-61,14;CL:0000542,7.10e-46,53;CL:0000051,7.10e-46,53;CL:0000838,9.35e-42,52;CL:0002087,5.24e-19,115;CL:0002031,5.56e-16,120;CL:0000738,1.56e-15,136;CL:0002032,4.12e-14,161;CL:0000837,4.12e-14,161;CL:0000037,2.28e-13,168;CL:0000988,1.69e-12,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.85e-31;53!UBERON:0001045;2.21e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;8.46e-09;1!DOID:0060058;4.90e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,7.56e-09,1;DOID:0060058,5.27e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.04e-14!15;UBERON:0000179!5.04e-14!15;UBERON:0000463!5.04e-14!15;UBERON:0007023!8.31e-12!115;UBERON:0001829!7.47e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.14e-08;1!UBERON:0001154;2.21e-08;1!UBERON:0001153;2.21e-08;1!UBERON:0009854;2.21e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.02e-08,1;UBERON:0001154,2.13e-08,1;UBERON:0001153,2.13e-08,1;UBERON:0001045,2.13e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,1.64201178899891,2.67616656466509,0,0,0,0,0,0,2.24654881682875,3.55423081218554,0.587200878669695,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,4.91524750135918,8.00558328477199,2.98711155796555,6.00593980554019,6.8970292794538,3.96626923670917,5.72432252721218,5.69212969109448,6.45960908308033,4.58727873750275,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,2.27858874869665,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,2.37937552888281,0,0,0,5.75989842889728,0.865615277858669,0,0,0.399158742865633,0,0.846694330895531,0,0,0.228234679033192,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,4.06179858021529,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.314408610199332,0.414239055347196,4.96166021811951,0,5.48066692714032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0.563903507879121,0.193373663920732,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,0 | |||
|short_description=p5@IGHM | |||
}} |
Revision as of 22:20, 11 January 2014
Short description: | p5@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IGHM_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -77bp_to_J00258_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.43e-94 | 24 |
pro-B cell | 2.43e-94 | 24 |
B cell | 1.38e-61 | 14 |
lymphocyte | 7.10e-46 | 53 |
common lymphoid progenitor | 7.10e-46 | 53 |
lymphoid lineage restricted progenitor cell | 9.35e-42 | 52 |
nongranular leukocyte | 5.24e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 5.56e-16 | 120 |
leukocyte | 1.56e-15 | 136 |
hematopoietic oligopotent progenitor cell | 4.12e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.12e-14 | 161 |
hematopoietic stem cell | 2.28e-13 | 168 |
hematopoietic cell | 1.69e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.02e-08 | 1 |
vermiform appendix | 2.13e-08 | 1 |
caecum | 2.13e-08 | 1 |
midgut | 2.13e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 7.56e-09 | 1 |
lymphoma | 5.27e-07 | 10 |