FFCP PHASE1:Hg19::chr15:41788010..41788018,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:41788010..41788018,- | |||
|id=chr15:41788010..41788018,- | |||
|ontology_enrichment_celltype=CL:0000039!2.43e-08!7;CL:0000586!2.43e-08!7;CL:1000415!9.93e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.24e-10;7!CL:0000586;2.24e-10;7!CL:0002535;1.71e-09;2!CL:0002178;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.04e-10,7;CL:0000586,2.04e-10,7;CL:0002535,2.02e-09,2;CL:0002178,7.70e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.61e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.66e-18;1!DOID:10165;2.66e-18;1!DOID:1798;2.66e-18;1!DOID:3111;4.44e-18;1!DOID:3603;4.44e-18;1!DOID:9119;1.22e-17;1!DOID:3119;3.02e-11;14!DOID:299;5.07e-11;25!DOID:4929;1.22e-09;2!DOID:3493;1.22e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.66e-18,1;DOID:10165,2.66e-18,1;DOID:1798,2.66e-18,1;DOID:3111,4.44e-18,1;DOID:3603,4.44e-18,1;DOID:9119,8.72e-18,1;DOID:3119,3.24e-11,14;DOID:299,5.21e-11,25;DOID:3493,1.22e-09,2;DOID:4929,1.33e-09,2;DOID:0050687,1.13e-08,143;DOID:305,2.93e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000160!2.24e-16!27;UBERON:0005409!1.95e-14!35;UBERON:0002294!2.15e-12!7;UBERON:0001173!2.15e-12!7;UBERON:0004912!2.15e-12!7;UBERON:0004907!8.00e-12!5;UBERON:0000059!2.08e-11!11;UBERON:0002110!8.00e-11!3;UBERON:0006242!8.00e-11!3;UBERON:0009497!5.58e-10!25;UBERON:0000015!5.58e-10!25;UBERON:0002423!5.58e-10!25;UBERON:0006235!5.58e-10!25;UBERON:0004161!5.58e-10!25;UBERON:0001052!7.97e-09!4;UBERON:0000369!3.68e-08!4;UBERON:0002435!3.68e-08!4;UBERON:0000204!3.68e-08!4;UBERON:0010082!3.68e-08!4;UBERON:0001870!7.78e-08!2;UBERON:0002780!1.85e-07!41;UBERON:0001890!1.85e-07!41;UBERON:0006240!1.85e-07!41;UBERON:0003080!3.09e-07!42;UBERON:0003929!6.10e-07!54;UBERON:0009854!7.99e-07!23;UBERON:0003350!9.90e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;7.19e-23;2!UBERON:0004913;6.23e-18;1!UBERON:0003703;6.23e-18;1!UBERON:0001174;6.23e-18;1!UBERON:0004914;6.23e-18;1!UBERON:0002108;3.84e-14;4!UBERON:0005409;7.25e-12;22!UBERON:0006955;1.71e-09;2!UBERON:0004801;1.71e-09;2!UBERON:0000160;6.50e-09;17!UBERON:0004921;2.30e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,8.04e-23,2;UBERON:0004913,7.37e-18,1;UBERON:0003703,7.37e-18,1;UBERON:0001174,7.37e-18,1;UBERON:0004914,7.37e-18,1;UBERON:0002108,4.11e-14,4;UBERON:0005409,1.60e-10,25;UBERON:0006955,2.02e-09,2;UBERON:0004801,2.02e-09,2;UBERON:0000160,6.68e-09,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0.902399225814824,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99843180798692,0,5.42707567183837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,1.0077309914171,0,0,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,1.1528195219403,2.69272933229316,0.108647371922008,0,0,0,0,0,0,0.676786981851542,0.784250137270958,0.167821586975843,0,0,0,0,0.706765357169704,0,4.97630965539252,0.442287822516696,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.586654148204409,0.0801588202515337,0.213452994739353,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86661500537946,0.576911008668165,0.741438982396034,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80361822045529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,6.80957405651698,0,2.06998520703863,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0.560544326627578,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25745537315059,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:41788010..41788018,- | |||
}} |
Revision as of 23:05, 11 January 2014
Short description: | p@chr15:41788010..41788018, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:41788010..41788018, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.04e-10 | 7 |
germ cell | 2.04e-10 | 7 |
epithelial cell of cervix | 2.02e-09 | 2 |
epithelial cell of stomach | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
duodenum | 8.04e-23 | 2 |
hepatopancreatic ampulla | 7.37e-18 | 1 |
extrahepatic bile duct | 7.37e-18 | 1 |
common bile duct | 7.37e-18 | 1 |
duodenal papilla | 7.37e-18 | 1 |
small intestine | 4.11e-14 | 4 |
gastrointestinal system | 1.60e-10 | 25 |
uterine epithelium | 2.02e-09 | 2 |
cervix epithelium | 2.02e-09 | 2 |
intestine | 6.68e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.66e-18 | 1 |
endocrine pancreas cancer | 2.66e-18 | 1 |
pancreatic endocrine carcinoma | 2.66e-18 | 1 |
cystadenocarcinoma | 4.44e-18 | 1 |
mucinous cystadenocarcinoma | 4.44e-18 | 1 |
acute myeloid leukemia | 8.72e-18 | 1 |
gastrointestinal system cancer | 3.24e-11 | 14 |
adenocarcinoma | 5.21e-11 | 25 |
signet ring cell adenocarcinoma | 1.22e-09 | 2 |
tubular adenocarcinoma | 1.33e-09 | 2 |
cell type cancer | 1.13e-08 | 143 |
carcinoma | 2.93e-07 | 106 |