FFCP PHASE1:Hg19::chr15:65715242..65715290,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57722 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13770 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TDY8 | |||
|association_with_transcript=119bp_to_ENST00000352385,NM_020962,uc002aou.1_5end | |||
|description=CAGE_peak_1_at_IGDCC4_5end | |||
|id=chr15:65715242..65715290,- | |||
|ontology_enrichment_celltype=CL:0000133!3.37e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.85e-21!94;UBERON:0001016!2.85e-21!94;UBERON:0005743!4.10e-21!86;UBERON:0001017!4.75e-21!82;UBERON:0000955!2.23e-19!69;UBERON:0006238!2.23e-19!69;UBERON:0000481!9.69e-19!347;UBERON:0002616!2.97e-18!59;UBERON:0001049!3.70e-17!57;UBERON:0005068!3.70e-17!57;UBERON:0006241!3.70e-17!57;UBERON:0007135!3.70e-17!57;UBERON:0000153!6.53e-17!129;UBERON:0007811!6.53e-17!129;UBERON:0000033!1.34e-16!123;UBERON:0004121!1.35e-16!169;UBERON:0000924!3.02e-16!173;UBERON:0006601!3.02e-16!173;UBERON:0003075!3.42e-16!86;UBERON:0007284!3.42e-16!86;UBERON:0002346!1.66e-15!90;UBERON:0000475!2.71e-15!365;UBERON:0007023!2.43e-13!115;UBERON:0000119!3.25e-13!312;UBERON:0003056!1.08e-12!61;UBERON:0000483!1.48e-12!309;UBERON:0003080!1.67e-11!42;UBERON:0002780!2.64e-11!41;UBERON:0001890!2.64e-11!41;UBERON:0006240!2.64e-11!41;UBERON:0002020!3.76e-10!34;UBERON:0003528!3.76e-10!34;UBERON:0001893!4.75e-10!34;UBERON:0000064!7.89e-10!219;UBERON:0002791!8.87e-10!33;UBERON:0000922!1.04e-09!612;UBERON:0001869!4.39e-09!32;UBERON:0000468!2.06e-08!659;UBERON:0000062!2.71e-08!511;UBERON:0002050!8.09e-08!605;UBERON:0005423!8.09e-08!605;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0000923!1.60e-07!604;UBERON:0005291!1.60e-07!604;UBERON:0006598!1.60e-07!604;UBERON:0002532!1.60e-07!604;UBERON:0000477!2.02e-07!286;UBERON:0003076!3.77e-07!15;UBERON:0003057!3.77e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.76e-10;49!UBERON:0001017;6.57e-09;75!UBERON:0000073;1.43e-08;53!UBERON:0002616;1.43e-08;53!UBERON:0002780;7.96e-08;41!UBERON:0001890;7.96e-08;41!UBERON:0001893;1.15e-07;34!UBERON:0000955;1.75e-07;68!UBERON:0003528;1.94e-07;34!UBERON:0002020;1.94e-07;34!UBERON:0001016;2.19e-07;83!UBERON:0001869;3.45e-07;32!UBERON:0002791;3.85e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-19,81;UBERON:0001016,9.59e-19,89;UBERON:0000955,9.70e-19,68;UBERON:0006238,9.70e-19,68;UBERON:0001049,3.19e-17,56;UBERON:0005068,3.19e-17,56;UBERON:0006241,3.19e-17,56;UBERON:0007135,3.19e-17,56;UBERON:0003075,1.99e-16,82;UBERON:0007284,1.99e-16,82;UBERON:0002346,9.73e-16,86;UBERON:0000073,6.22e-15,53;UBERON:0002616,6.22e-15,53;UBERON:0004121,1.68e-14,171;UBERON:0000924,1.68e-14,171;UBERON:0006601,1.68e-14,171;UBERON:0010371,1.77e-14,104;UBERON:0010314,1.11e-13,132;UBERON:0002780,2.29e-10,41;UBERON:0001890,2.29e-10,41;UBERON:0003080,2.29e-10,41;UBERON:0006240,2.29e-10,41;UBERON:0003056,1.97e-09,61;UBERON:0003528,2.14e-09,34;UBERON:0002020,2.14e-09,34;UBERON:0011216,2.32e-09,223;UBERON:0001893,2.85e-09,34;UBERON:0003076,9.08e-09,15;UBERON:0003057,9.08e-09,15;UBERON:0000119,1.14e-08,309;UBERON:0000483,2.99e-08,306;UBERON:0002791,3.17e-08,32;UBERON:0001869,5.61e-08,32 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,1.31883489114227,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0.975865597581014,2.83178433576612,3.26401105990805,5.32873026512749,2.57612388417951,1.77936752594749,1.63205431473244,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0.50133791063589,0.289693037921647,0,0,1.41802225746102,0.665188192387692,0.614843499851882,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0,0,1.12135520028461,0,1.2333377420858,0.311211035399766,0.134710672069688,0,7.41651395460164,7.49028701823999,1.64025002283658,0,0,0.448346041655403,1.17434498643765,0.971237666208789,1.26405726032024,0.408308342509787,1.10550885580591,1.54988671763648,7.12801714369232,1.97813543422845,0,0,0.168336113954066,0.500474079487857,0,0,0,1.65261864797256,0,2.87023417102179,3.20336083227851,0.211931901159562,0.300091096084402,0.412210116953756,0.515281080091258,0.744467425326359,0,0,0.252433774244115,0.368199594569197,0,1.06502877754984,0.604512589365842,0,0,0,0,1.46368447355514,1.72288698817931,1.2781333715647,2.07322110030741,1.00928340350251,2.18986415445498,7.8224766164908,8.36213219650751,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0.368965315629341,0.343135620597051,0,0,0,0,1.3032332212413,1.03993478527958,0,2.66639931442677,1.29149563659404,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.380987365753014,0.381988425558278,0,3.4214489204541,0.102827492703324,0,0,1.23344192779897,1.30788020649984,0.5867062865676,0.387815147273333,0,0,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.142977993658148,1.62786481617433,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.723906533337896,0,1.07436577943937,0,0.197030760201927,0,0,0.76228387266739,1.30139853857622,0,1.17261385734044,1.91381625495949,0,0,0,0.24538298343828,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0,2.40756879782175,6.82222512167955,2.0694614258501,0,0.184369168541703,2.86715927744673,17.2305018567212,11.3237329857582,0,0,0,0,6.65741758041988,1.81434175997808,0,0.153461973288062,0,0,0,0,0,0,0.532685175939381,0.164254312027618,0,0.116210378459959,0.604297247958111,0,0,0,1.82091168006717,1.31124414959424,4.06079651616671,1.30926073077505,0.784349769176855,1.46139224653261,1.16106791782163,0,0,0.215915916102139,0,0,3.01013864312912,1.01950509218015,5.81753206250107,2.68649705666614,0,0,0.512900250232778,0.984043937099117,0,1.44257416306811,0.640986253728404,0.330037999682352,0,0,0,1.16004861950546,0.462145851343933,0.921022048356777,0.275673144969061,1.28904293841928,0.870100163485371,0.852266274161009,4.09547363974992,0,0,0.127612712494584,0,0,1.25924938732256,0,0,0,0,0.37064843820784,0,5.58237554039501,2.53103539774981,0.953150969619124,0.255897791311334,0.855877976067841,0.318203247925937,0,1.61885211824983,1.92175920815238,1.64937363283961,0,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,1.1312434556297,0,0,0,0,1.73632660280006,0.655894752046633,0,0.6196469961995,0,0.143411352204052,0.196498082026242,0,0.709522128141196,0.633322905892992,0.658589785919804,0.75894634753143,2.0996083214699,0,0.670302275535787,0,1.50630081242847,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.640944426764839,8.66231869737023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,2.2507106625682,0.111308705022906,0,0.211125408127993,1.59398390600856,1.93398740871803,0,0.818149460017238,0,0.311039587661807,0.629078458031288,0,0,0.887790650732402,0,0,0.969332746095218,1.11321717794222,5.98841394003583,0,0,0.724999575434793,0,0,0,0.344743373241465,0.583209226766509,0,0,1.68835014075571,0,1.10579259931225,0.591095237907095,0.219385397153973,0,0,2.30850775511391,0,2.53620294826866,0,1.52106320690811,0,0.274792780205587,0,0,0,0,0,0,0.503464760927528,0,0,0,0,0,0.432777279484182,2.98578579323551,0.353830258013357,1.22206028986725,0,0,0,2.15683625538167,16.8541305932746,2.10838001152805,0,0,0.485560759068186,0.394584402849391,7.25944296291983,2.75465485467441,0.189559738885464,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,0,0,2.79562669187248,0.343972064943233,0,0,0,0.290967049465258,3.00070830751101,2.03382666702479,0.274083849293502,0,0.696418755514666,0.195551382734803,0.721429382263803,1.28071796843612,0.19980960958213,0,0.343609788497747,1.54435498075768,0,0,0,0,0,0,8.09061651724253,1.20084057741958,1.9166753044879,0,0,0,2.23425921017803,1.3749625440701,0,0,0,0,1.67958681216816,0.360299883542404,1.16495949527454,0,0,0.06740354385418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| |||
|short_description=p1@IGDCC4 | |||
}} |
Revision as of 00:07, 12 January 2014
Short description: | p1@IGDCC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGDCC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 119bp_to_ENST00000352385, NM_020962, uc002aou.1_5end |
EntrezGene: | IGDCC4 |
HGNC: | 13770 |
UniProt: | Q8TDY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.63e-19 | 81 |
nervous system | 9.59e-19 | 89 |
brain | 9.70e-19 | 68 |
future brain | 9.70e-19 | 68 |
neural tube | 3.19e-17 | 56 |
neural rod | 3.19e-17 | 56 |
future spinal cord | 3.19e-17 | 56 |
neural keel | 3.19e-17 | 56 |
neural plate | 1.99e-16 | 82 |
presumptive neural plate | 1.99e-16 | 82 |
neurectoderm | 9.73e-16 | 86 |
regional part of nervous system | 6.22e-15 | 53 |
regional part of brain | 6.22e-15 | 53 |
ectoderm-derived structure | 1.68e-14 | 171 |
ectoderm | 1.68e-14 | 171 |
presumptive ectoderm | 1.68e-14 | 171 |
ecto-epithelium | 1.77e-14 | 104 |
structure with developmental contribution from neural crest | 1.11e-13 | 132 |
regional part of forebrain | 2.29e-10 | 41 |
forebrain | 2.29e-10 | 41 |
anterior neural tube | 2.29e-10 | 41 |
future forebrain | 2.29e-10 | 41 |
pre-chordal neural plate | 1.97e-09 | 61 |
brain grey matter | 2.14e-09 | 34 |
gray matter | 2.14e-09 | 34 |
organ system subdivision | 2.32e-09 | 223 |
telencephalon | 2.85e-09 | 34 |
posterior neural tube | 9.08e-09 | 15 |
chordal neural plate | 9.08e-09 | 15 |
cell layer | 1.14e-08 | 309 |
epithelium | 2.99e-08 | 306 |
regional part of telencephalon | 3.17e-08 | 32 |
cerebral hemisphere | 5.61e-08 | 32 |