FFCP PHASE1:Hg19::chr16:447255..447266,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7852 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000460297_5end | |||
|coexpression_cluster_id=C2373 | |||
|description=CAGE_peak_4_at_NME4_5end | |||
|id=chr16:447255..447266,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.60e-27!180;CL:0000222!2.24e-18!119;CL:0000183!4.79e-18!59;CL:0000192!8.58e-17!42;CL:0000514!8.58e-17!42;CL:0000680!1.43e-16!57;CL:0000056!1.43e-16!57;CL:0000355!1.43e-16!57;CL:0000187!4.64e-16!54;CL:0000393!9.84e-15!60;CL:0000211!9.84e-15!60;CL:0000220!1.52e-14!246;CL:0002321!3.10e-14!248;CL:0000359!2.22e-13!32;CL:0000144!7.03e-10!625;CL:0000057!8.53e-10!75;CL:0002371!1.18e-08!591;CL:0000136!1.50e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.26e-13;32!CL:0000192;3.48e-12;43!CL:0000187;3.09e-09;55!CL:0000393;4.52e-08;61!CL:0000211;4.52e-08;61!CL:0000136;8.56e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.91e-19,121;CL:0000680,4.60e-17,58;CL:0000056,4.60e-17,58;CL:0000355,4.60e-17,58;CL:0000192,6.44e-17,43;CL:0000514,6.44e-17,43;CL:0000187,1.55e-16,55;CL:0000393,3.05e-15,61;CL:0000211,3.05e-15,61;CL:0002321,9.27e-14,250;CL:0000359,1.16e-13,32;CL:0000057,8.61e-10,76;CL:0000136,1.08e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;3.48e-12;43!CL:0000355;6.69e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.37e-19!143;UBERON:0000914!1.05e-15!83;UBERON:0002329!1.05e-15!83;UBERON:0003077!1.05e-15!83;UBERON:0003059!1.05e-15!83;UBERON:0007282!1.05e-15!83;UBERON:0009618!1.05e-15!83;UBERON:0007285!1.05e-15!83;UBERON:0002385!3.14e-15!63;UBERON:0001015!3.14e-15!63;UBERON:0000383!3.14e-15!63;UBERON:0000486!5.08e-15!82;UBERON:0004290!6.00e-15!70;UBERON:0001134!6.23e-15!61;UBERON:0002036!6.23e-15!61;UBERON:0003082!6.23e-15!61;UBERON:0002100!1.22e-14!216;UBERON:0003914!1.53e-14!118;UBERON:0002049!3.67e-14!79;UBERON:0007798!3.67e-14!79;UBERON:0004872!6.49e-13!84;UBERON:0000490!2.90e-12!138;UBERON:0001981!1.99e-11!60;UBERON:0007500!1.99e-11!60;UBERON:0004537!1.99e-11!60;UBERON:0006965!1.99e-11!60;UBERON:0001637!4.91e-11!42;UBERON:0003509!4.91e-11!42;UBERON:0004572!4.91e-11!42;UBERON:0000475!5.86e-11!365;UBERON:0000055!7.37e-11!69;UBERON:0000119!1.19e-10!312;UBERON:0000483!1.83e-10!309;UBERON:0001009!2.63e-10!113;UBERON:0004535!5.81e-10!110;UBERON:0003104!2.06e-08!238;UBERON:0009142!2.06e-08!238;UBERON:0004573!2.64e-08!33;UBERON:0004571!2.64e-08!33;UBERON:0000481!1.18e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.40e-08;42!UBERON:0003509;9.40e-08;42!UBERON:0004572;9.40e-08;42!UBERON:0004573;1.00e-07;33!UBERON:0004571;1.00e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.95e-19,160;UBERON:0009142,3.95e-19,160;UBERON:0005256,1.00e-18,122;UBERON:0007503,4.10e-17,78;UBERON:0007524,1.36e-15,73;UBERON:0002385,1.53e-15,64;UBERON:0001015,1.53e-15,64;UBERON:0000383,1.53e-15,64;UBERON:0002329,2.86e-15,71;UBERON:0003059,2.86e-15,71;UBERON:0007282,2.86e-15,71;UBERON:0004290,2.86e-15,71;UBERON:0009618,2.86e-15,71;UBERON:0001134,3.09e-15,62;UBERON:0002036,3.09e-15,62;UBERON:0003082,3.09e-15,62;UBERON:0000486,3.85e-15,83;UBERON:0003077,3.96e-15,72;UBERON:0007285,3.96e-15,72;UBERON:0003914,6.04e-15,117;UBERON:0002049,9.35e-14,78;UBERON:0007798,9.35e-14,78;UBERON:0000490,2.71e-13,148;UBERON:0002100,3.51e-13,199;UBERON:0004872,1.91e-12,83;UBERON:0001637,3.74e-11,42;UBERON:0003509,3.74e-11,42;UBERON:0004572,3.74e-11,42;UBERON:0007500,5.82e-11,59;UBERON:0001981,5.82e-11,59;UBERON:0004537,5.82e-11,59;UBERON:0006965,5.82e-11,59;UBERON:0000055,1.58e-10,68;UBERON:0001009,5.48e-10,112;UBERON:0000119,6.69e-10,309;UBERON:0000483,1.02e-09,306;UBERON:0004535,1.22e-09,109;UBERON:0004573,2.31e-08,33;UBERON:0004571,2.31e-08,33 | |||
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| |||
|short_description=p4@NME4 | |||
}} |
Revision as of 01:38, 12 January 2014
Short description: | p4@NME4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NME4_5end |
Coexpression cluster: | C2373_Mesenchymal_Renal_leiomyoblastoma_Hepatic_Pericytes_Fibroblast_Smooth |
Association with transcript: | 47bp_to_ENST00000460297_5end |
EntrezGene: | NME4 |
HGNC: | 7852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.91e-19 | 121 |
muscle precursor cell | 4.60e-17 | 58 |
myoblast | 4.60e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.60e-17 | 58 |
smooth muscle cell | 6.44e-17 | 43 |
smooth muscle myoblast | 6.44e-17 | 43 |
muscle cell | 1.55e-16 | 55 |
electrically responsive cell | 3.05e-15 | 61 |
electrically active cell | 3.05e-15 | 61 |
embryonic cell | 9.27e-14 | 250 |
vascular associated smooth muscle cell | 1.16e-13 | 32 |
fibroblast | 8.61e-10 | 76 |
fat cell | 1.08e-07 | 15 |