FFCP PHASE1:Hg19::chr16:3065277..3065296,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr16:3065277..3065296,- | |||
|id=chr16:3065277..3065296,- | |||
|ontology_enrichment_celltype=CL:0000039!2.87e-31!7;CL:0000586!2.87e-31!7;CL:0002322!2.96e-23!5;CL:1000507!3.90e-18!12;CL:1000494!3.90e-18!12;CL:1000449!1.61e-17!16;CL:1000497!2.00e-15!18;CL:0002518!2.00e-15!18;CL:0002681!2.59e-12!13;CL:0002584!2.59e-12!13;CL:0000540!6.80e-08!6;CL:0000031!6.80e-08!6;CL:0000404!6.80e-08!6;CL:0000075!2.64e-07!27;CL:0000239!5.00e-07!3;CL:1000615!5.00e-07!3;CL:0002306!5.00e-07!3;CL:0000066!7.33e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.35e-44;5!CL:0000039;1.06e-20;7!CL:0000586;1.06e-20;7!CL:1000449;2.31e-15;15!CL:1000507;5.20e-15;10!CL:1000494;5.20e-15;10!CL:0002321;7.26e-15;15!CL:0000540;1.05e-14;6!CL:0000404;1.05e-14;6!CL:1000497;1.53e-13;17!CL:0002518;1.53e-13;17!CL:0000148;1.04e-08;10!CL:0002681;1.57e-07;12!CL:0002584;1.57e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.24e-44,5;CL:0000039,1.06e-20,7;CL:0000586,1.06e-20,7;CL:1000449,2.25e-15,15;CL:1000507,5.02e-15,10;CL:1000494,5.02e-15,10;CL:0000540,1.05e-14,6;CL:0000031,1.05e-14,6;CL:0000404,1.05e-14,6;CL:1000497,1.49e-13,17;CL:0002518,1.49e-13,17;CL:0000047,3.65e-11,8;CL:0000148,1.14e-08,10;CL:0000541,1.14e-08,10;CL:0002681,1.59e-07,12;CL:0002584,1.59e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000031;1.05e-14;6!UBERON:0009117;1.42e-14;10!UBERON:0005564;1.42e-14;10 | |||
|ontology_enrichment_disease=DOID:3095!8.91e-19!22;DOID:2994!8.91e-19!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.00e-10;1!DOID:10165;3.00e-10;1!DOID:1798;3.00e-10;1!DOID:3095;4.62e-10;22!DOID:2994;4.62e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.50e-10,1;DOID:10165,2.50e-10,1;DOID:1798,2.50e-10,1;DOID:3095,4.62e-10,22;DOID:2994,4.62e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0009773!3.90e-18!12;UBERON:0001231!3.90e-18!12;UBERON:0004810!3.90e-18!12;UBERON:0004211!1.61e-17!16;UBERON:0001285!1.61e-17!16;UBERON:0007684!1.61e-17!16;UBERON:0003220!1.61e-17!16;UBERON:0004208!1.61e-17!16;UBERON:0006555!2.07e-16!17;UBERON:0005103!2.07e-16!17;UBERON:0000083!2.07e-16!17;UBERON:0009201!2.07e-16!17;UBERON:0004819!2.07e-16!17;UBERON:0006553!2.07e-16!17;UBERON:0003074!2.07e-16!17;UBERON:0003060!2.07e-16!17;UBERON:0000080!2.00e-15!18;UBERON:0002120!2.00e-15!18;UBERON:0004875!2.00e-15!18;UBERON:0005721!2.00e-15!18;UBERON:0005754!2.00e-15!18;UBERON:0007297!2.00e-15!18;UBERON:0004876!9.48e-14!20;UBERON:0003887!4.95e-13!21;UBERON:0000058!7.58e-13!26;UBERON:0001225!2.59e-12!13;UBERON:0008987!2.59e-12!13;UBERON:0003886!2.52e-11!63;UBERON:0002553!6.88e-10!70;UBERON:0001851!6.97e-10!16;UBERON:0002113!7.65e-10!27;UBERON:0003918!7.65e-10!27;UBERON:0005095!7.65e-10!27;UBERON:0007687!7.65e-10!27;UBERON:0000473!2.07e-09!8;UBERON:0000353!2.91e-09!17;UBERON:0000489!4.22e-08!32;UBERON:0006853!5.00e-07!3;UBERON:0007685!5.00e-07!3;UBERON:0004134!5.00e-07!3;UBERON:0003135!7.48e-07!11;UBERON:0003064!7.80e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.31e-15;15!UBERON:0004819;2.31e-15;15!UBERON:0001285;2.31e-15;15!UBERON:0007684;2.31e-15;15!UBERON:0004211;5.20e-15;10!UBERON:0009773;5.20e-15;10!UBERON:0001231;5.20e-15;10!UBERON:0004810;5.20e-15;10!UBERON:0000473;1.08e-10;8!UBERON:0002113;1.50e-09;24!UBERON:0011143;1.50e-09;24!UBERON:0003135;6.47e-08;11!UBERON:0000489;7.16e-08;29!UBERON:0006554;1.33e-07;30!UBERON:0001008;1.33e-07;30!UBERON:0001225;1.57e-07;12!UBERON:0008987;1.57e-07;12!UBERON:0000991;4.92e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.25e-15,15;UBERON:0009773,2.25e-15,15;UBERON:0001231,2.25e-15,15;UBERON:0001285,2.25e-15,15;UBERON:0007684,2.25e-15,15;UBERON:0004208,2.25e-15,15;UBERON:0004810,5.02e-15,10;UBERON:0006555,2.08e-14,16;UBERON:0004819,2.08e-14,16;UBERON:0000473,1.27e-10,8;UBERON:0002113,8.28e-09,26;UBERON:0003918,8.28e-09,26;UBERON:0011143,8.28e-09,26;UBERON:0005095,8.28e-09,26;UBERON:0007687,8.28e-09,26;UBERON:0003135,7.29e-08,11;UBERON:0001225,1.59e-07,12;UBERON:0008987,1.59e-07,12;UBERON:0000489,2.34e-07,31;UBERON:0000991,5.34e-07,21;UBERON:0009196,5.34e-07,21;UBERON:0009117,5.34e-07,21;UBERON:0005564,5.34e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,13.2582221914761,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.58565817968474,1.06023814657188,1.16193942869518,1.45125477021519,4.03713361401005,5.83963774521328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0.902399225814824,3.61972084390749,0,4.38417673959782,2.53323909342902,0,0,0,0,0,0.501689773854853,0.254876273045038,0,2.0148727924996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,1.79515288819544,0.869178975376065,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,3.69732241469544,5.36403802729212,19.9411362254009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57144016688853,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38783067318587,0.655593431782173,0.253397002022874,1.22386595690378,1.3360870263278,0.735159196278759,2.005660314339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:3065277..3065296,- | |||
}} |
Revision as of 01:59, 12 January 2014
Short description: | p@chr16:3065277..3065296, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3065277..3065296, - |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.24e-44 | 5 |
germ line cell | 1.06e-20 | 7 |
germ cell | 1.06e-20 | 7 |
epithelial cell of nephron | 2.25e-15 | 15 |
kidney tubule cell | 5.02e-15 | 10 |
nephron tubule epithelial cell | 5.02e-15 | 10 |
neuron | 1.05e-14 | 6 |
neuroblast | 1.05e-14 | 6 |
electrically signaling cell | 1.05e-14 | 6 |
kidney cell | 1.49e-13 | 17 |
kidney epithelial cell | 1.49e-13 | 17 |
neuronal stem cell | 3.65e-11 | 8 |
melanocyte | 1.14e-08 | 10 |
melanoblast | 1.14e-08 | 10 |
kidney cortical cell | 1.59e-07 | 12 |
renal cortical epithelial cell | 1.59e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.25e-15 | 15 |
renal tubule | 2.25e-15 | 15 |
nephron tubule | 2.25e-15 | 15 |
nephron | 2.25e-15 | 15 |
uriniferous tubule | 2.25e-15 | 15 |
nephrogenic mesenchyme | 2.25e-15 | 15 |
nephron tubule epithelium | 5.02e-15 | 10 |
excretory tube | 2.08e-14 | 16 |
kidney epithelium | 2.08e-14 | 16 |
testis | 1.27e-10 | 8 |
kidney | 8.28e-09 | 26 |
kidney mesenchyme | 8.28e-09 | 26 |
upper urinary tract | 8.28e-09 | 26 |
kidney rudiment | 8.28e-09 | 26 |
kidney field | 8.28e-09 | 26 |
male reproductive organ | 7.29e-08 | 11 |
cortex of kidney | 1.59e-07 | 12 |
renal parenchyma | 1.59e-07 | 12 |
cavitated compound organ | 2.34e-07 | 31 |
gonad | 5.34e-07 | 21 |
indifferent external genitalia | 5.34e-07 | 21 |
indifferent gonad | 5.34e-07 | 21 |
gonad primordium | 5.34e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.50e-10 | 1 |
endocrine pancreas cancer | 2.50e-10 | 1 |
pancreatic endocrine carcinoma | 2.50e-10 | 1 |
germ cell and embryonal cancer | 4.62e-10 | 22 |
germ cell cancer | 4.62e-10 | 22 |