FFCP PHASE1:Hg19::chr16:51185318..51185348,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10524 | |||
|TSSclassifier=weak | |||
|UniProt=Q9NSC2 | |||
|association_with_transcript=-135bp_to_NM_002968,uc010cbv.2,uc010vgs.1_5end | |||
|description=CAGE_peak_2_at_SALL1_5end | |||
|id=chr16:51185318..51185348,- | |||
|ontology_enrichment_celltype=CL:0002319!6.07e-11!25;CL:0000243!1.95e-07!15;CL:0000125!1.95e-07!15;CL:0000030!1.95e-07!15;CL:0000339!1.95e-07!15;CL:0000055!3.24e-07!180;CL:0000047!6.18e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.59e-13;25!CL:1000507;1.28e-09;10!CL:1000494;1.28e-09;10!CL:0000128;6.33e-08;7!CL:0000126;6.33e-08;7!CL:0000127;6.33e-08;7!CL:0000243;1.48e-07;15!CL:0000125;1.48e-07;15!CL:0000540;2.80e-07;6!CL:0000404;2.80e-07;6!CL:1000497;6.25e-07;17!CL:0002518;6.25e-07;17!CL:1000449;7.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.59e-13,25;CL:1000507,9.03e-10,10;CL:1000494,9.03e-10,10;CL:0000047,1.04e-09,8;CL:0000128,6.40e-08,7;CL:0000126,6.40e-08,7;CL:0000127,6.40e-08,7;CL:0002453,6.40e-08,7;CL:0000243,1.27e-07,15;CL:0000125,1.27e-07,15;CL:0000030,1.27e-07,15;CL:0000339,1.27e-07,15;CL:0000540,3.48e-07,6;CL:0000031,3.48e-07,6;CL:0000404,3.48e-07,6;CL:1000497,5.52e-07,17;CL:0002518,5.52e-07,17;CL:1000449,7.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.26e-12;82!UBERON:0006238;1.15e-07;10!CL:0000339;1.48e-07;15!CL:0000031;2.80e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.50e-52!82;UBERON:0005743!2.56e-49!86;UBERON:0000073!2.81e-46!94;UBERON:0001016!2.81e-46!94;UBERON:0001049!2.85e-43!57;UBERON:0005068!2.85e-43!57;UBERON:0006241!2.85e-43!57;UBERON:0007135!2.85e-43!57;UBERON:0000955!1.55e-42!69;UBERON:0006238!1.55e-42!69;UBERON:0002616!5.14e-36!59;UBERON:0002780!2.83e-33!41;UBERON:0001890!2.83e-33!41;UBERON:0006240!2.83e-33!41;UBERON:0003080!5.28e-32!42;UBERON:0003075!1.22e-31!86;UBERON:0007284!1.22e-31!86;UBERON:0002346!4.26e-31!90;UBERON:0002020!7.02e-28!34;UBERON:0003528!7.02e-28!34;UBERON:0001893!8.33e-28!34;UBERON:0002791!4.62e-27!33;UBERON:0001869!5.95e-26!32;UBERON:0003056!1.28e-23!61;UBERON:0000033!3.97e-23!123;UBERON:0000924!2.19e-22!173;UBERON:0006601!2.19e-22!173;UBERON:0004121!2.42e-22!169;UBERON:0000153!2.75e-22!129;UBERON:0007811!2.75e-22!129;UBERON:0000025!1.32e-21!194;UBERON:0000475!3.70e-21!365;UBERON:0007023!4.12e-21!115;UBERON:0000956!1.57e-20!25;UBERON:0000203!1.57e-20!25;UBERON:0002619!4.44e-18!22;UBERON:0001950!2.17e-16!20;UBERON:0000119!5.55e-16!312;UBERON:0004111!1.13e-15!241;UBERON:0000483!4.71e-15!309;UBERON:0000468!5.66e-15!659;UBERON:0000467!1.36e-13!625;UBERON:0000480!1.89e-13!626;UBERON:0000062!4.38e-13!511;UBERON:0000477!1.71e-12!286;UBERON:0000481!2.14e-12!347;UBERON:0003076!4.19e-12!15;UBERON:0003057!4.19e-12!15;UBERON:0000922!6.38e-12!612;UBERON:0004732!1.51e-10!13;UBERON:0004733!1.13e-09!12;UBERON:0002028!1.13e-09!12;UBERON:0007277!1.13e-09!12;UBERON:0002050!2.10e-09!605;UBERON:0005423!2.10e-09!605;UBERON:0000923!4.40e-09!604;UBERON:0005291!4.40e-09!604;UBERON:0006598!4.40e-09!604;UBERON:0002532!4.40e-09!604;UBERON:0002308!9.00e-09!9;UBERON:0000125!9.00e-09!9;UBERON:0002420!1.07e-08!9;UBERON:0007245!1.07e-08!9;UBERON:0010009!1.07e-08!9;UBERON:0010011!1.07e-08!9;UBERON:0000454!1.07e-08!9;UBERON:0000064!5.28e-08!219;UBERON:0001871!1.46e-07!7;UBERON:0002680!3.00e-07!9;UBERON:0001895!3.00e-07!9;UBERON:0010092!3.00e-07!9;UBERON:0000489!3.14e-07!32;UBERON:0009663!4.58e-07!7;UBERON:0001894!7.86e-07!7;UBERON:0006222!7.86e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.35e-35;34!UBERON:0002020;1.35e-35;34!UBERON:0002780;1.56e-35;41!UBERON:0001890;1.56e-35;41!UBERON:0001893;1.61e-35;34!UBERON:0002791;2.79e-35;32!UBERON:0000073;3.51e-35;53!UBERON:0002616;3.51e-35;53!UBERON:0001869;5.01e-35;32!UBERON:0000956;2.14e-30;25!UBERON:0000203;2.14e-30;25!UBERON:0000955;4.10e-27;68!UBERON:0002619;1.23e-26;22!UBERON:0001017;3.07e-26;75!UBERON:0001950;4.49e-24;20!UBERON:0001016;4.82e-23;83!UBERON:0004732;4.00e-15;13!UBERON:0004733;8.38e-14;12!UBERON:0002028;8.38e-14;12!UBERON:0000125;1.89e-12;9!UBERON:0002308;1.89e-12;9!UBERON:0002420;2.57e-12;9!UBERON:0007245;2.57e-12;9!UBERON:0010009;2.57e-12;9!UBERON:0010011;2.57e-12;9!UBERON:0000454;2.57e-12;9!UBERON:0002680;3.83e-10;9!UBERON:0001895;3.83e-10;9!UBERON:0000489;5.85e-10;29!UBERON:0009663;7.11e-10;7!UBERON:0004211;1.28e-09;10!UBERON:0009773;1.28e-09;10!UBERON:0001231;1.28e-09;10!UBERON:0004810;1.28e-09;10!UBERON:0001894;1.84e-09;7!UBERON:0001871;2.04e-09;6!UBERON:0002298;3.42e-09;6!UBERON:0000200;2.09e-08;6!UBERON:0002113;2.95e-08;24!UBERON:0011143;2.95e-08;24!UBERON:0007023;4.61e-08;114!UBERON:0000349;7.46e-08;5!UBERON:0011216;3.17e-07;132!UBERON:0002784;6.35e-07;4!UBERON:0001872;6.92e-07;5!UBERON:0006555;7.98e-07;15!UBERON:0004819;7.98e-07;15!UBERON:0001285;7.98e-07;15!UBERON:0007684;7.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.83e-75,81;UBERON:0001016,8.37e-68,89;UBERON:0001049,7.05e-67,56;UBERON:0005068,7.05e-67,56;UBERON:0006241,7.05e-67,56;UBERON:0007135,7.05e-67,56;UBERON:0000073,7.22e-63,53;UBERON:0002616,7.22e-63,53;UBERON:0000955,1.80e-62,68;UBERON:0006238,1.80e-62,68;UBERON:0002780,1.03e-49,41;UBERON:0001890,1.03e-49,41;UBERON:0003080,1.03e-49,41;UBERON:0006240,1.03e-49,41;UBERON:0003075,4.42e-49,82;UBERON:0007284,4.42e-49,82;UBERON:0002346,1.43e-47,86;UBERON:0003528,1.67e-41,34;UBERON:0002020,1.67e-41,34;UBERON:0001893,2.17e-41,34;UBERON:0002791,7.80e-39,32;UBERON:0001869,1.44e-38,32;UBERON:0003056,8.46e-37,61;UBERON:0010371,2.01e-36,104;UBERON:0010314,9.55e-34,132;UBERON:0004121,2.07e-31,171;UBERON:0000924,2.07e-31,171;UBERON:0006601,2.07e-31,171;UBERON:0000956,2.52e-30,25;UBERON:0000203,2.52e-30,25;UBERON:0000025,1.10e-27,192;UBERON:0011216,5.68e-27,223;UBERON:0002619,1.35e-26,22;UBERON:0001950,4.97e-24,20;UBERON:0007023,2.04e-23,114;UBERON:0004111,1.01e-18,240;UBERON:0000119,2.82e-18,309;UBERON:0003076,1.59e-17,15;UBERON:0003057,1.59e-17,15;UBERON:0000483,1.84e-17,306;UBERON:0004732,3.62e-15,13;UBERON:0004733,7.59e-14,12;UBERON:0002028,7.59e-14,12;UBERON:0007277,7.59e-14,12;UBERON:0000125,1.75e-12,9;UBERON:0002308,1.75e-12,9;UBERON:0002420,2.29e-12,9;UBERON:0007245,2.29e-12,9;UBERON:0010009,2.29e-12,9;UBERON:0010011,2.29e-12,9;UBERON:0000454,2.29e-12,9;UBERON:0000922,1.31e-11,592;UBERON:0002680,3.49e-10,9;UBERON:0001895,3.49e-10,9;UBERON:0010092,3.49e-10,9;UBERON:0000489,4.48e-10,31;UBERON:0009663,6.61e-10,7;UBERON:0004810,9.03e-10,10;UBERON:0001894,1.49e-09,7;UBERON:0006222,1.49e-09,7;UBERON:0001871,1.96e-09,6;UBERON:0002298,3.26e-09,6;UBERON:0005423,5.37e-09,581;UBERON:0000200,1.91e-08,6;UBERON:0002113,2.22e-08,26;UBERON:0003918,2.22e-08,26;UBERON:0011143,2.22e-08,26;UBERON:0005095,2.22e-08,26;UBERON:0007687,2.22e-08,26;UBERON:0005172,5.19e-08,54;UBERON:0005173,5.19e-08,54;UBERON:0000349,6.77e-08,5;UBERON:0006555,1.99e-07,16;UBERON:0004819,1.99e-07,16;UBERON:0002417,3.87e-07,60;UBERON:0000916,3.87e-07,60;UBERON:0002784,6.42e-07,4;UBERON:0004211,7.10e-07,15;UBERON:0009773,7.10e-07,15;UBERON:0001231,7.10e-07,15;UBERON:0001285,7.10e-07,15;UBERON:0007684,7.10e-07,15;UBERON:0004208,7.10e-07,15;UBERON:0001872,7.64e-07,5 | |||
|phase1_expression=0.363356758541113,0,0,1.0007329835313,0,0.872338524100369,0,0,1.30592814099919,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0,1.72369481307503,1.22400414746552,3.76145665773705,12.3081474466354,9.17058647988324,10.0434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0,0,0.486634870302636,0.661743720148475,0,0,5.17367348215965,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,1.24484414159907,0.808264032418128,1.30769522490767,0.151357427644931,0,1.87457145467037,0.936480230490962,1.71141546463335,1.64393548606981,0,0,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0.226864366320042,2.15267562826634,0.640672166455702,0.635795703478686,0.900273288253207,0.515262646192195,0.772921620136887,0.18611685633159,0.506328996723799,0.779496041289589,1.7670364197088,0.736399189138395,0,2.4850671476163,2.11579406278045,0.67824236924195,0,0,0,3.90315859614705,7.55419679432466,5.34492137199785,5.07939169575315,4.28945446488568,2.91981887260664,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5483559197112,15.725235466842,16.5421173870793,0,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,3.59384255422738,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,2.91540819297938,0.43596006883328,3.00686971865895,0,0,0,1.32969058292435,1.04007436911366,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,28.9667871613608,9.10978977003352,8.50617694055465,4.02039036802437,8.93114252314428,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.695068915744663,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.918515585316854,1.0925470080403,0.917870904715969,5.41439535488894,1.77135275340154,3.92174884588428,4.38417673959782,1.37217117560738,1.13733384070897,0.170093705276516,0.431831832204279,0,1.62567862526312,2.50844886927427,3.56826782263054,2.49322802678617,4.47749509444357,0,0,0,0,0,8.75848599005639,1.46511143709349,0.660075999364704,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0.859361958946189,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0,0,0,0.62962469366128,0,2.7723022215848,0,0.869932992075073,0.37064843820784,0,0,0,0,0,0,2.86382923133343,0,0.719489830333259,0,0,0.202182481573316,0,1.26377536871694,0,0.243713489631284,0,1.63799893689583,0.565621727814851,0,1.10273068709225,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0.430234056612155,0,0,2.48332744849418,0,0,1.51789269506286,0,0,0,0,7.43736026136555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865615277858669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,14.2076110574618,0,0,0,0.19924798825107,0,0,1.43176155503017,0,0,0,0,0,0.591860433821602,0,0,21.3253204140948,7.32867975478625,9.98068990005971,0,0,0,0,0,0,0,0,0,11.5146380155799,8.07996138790233,6.10326945268333,2.65390223834939,3.54657142744257,6.3621765174652,0,0,6.46382171431895,0,0,0,0,0.31900115973192,1.19076871422421,0,0,0,0,0,0,0,0,0,1.89898258075224,0,0,0,0.995261931078505,0.0884575645033392,1.83309043480088,0.296521128680622,0.494255755786011,0.313265848516366,23.2533908783336,0,11.2446933948163,0,0,0,0,3.62972148145992,6.1214552326098,0.379119477770928,1.50323419414493,2.69589297632843,0,0,0,0,0.284609546029793,0.554698692052555,0.867798691675654,0,0,1.22308667769421,0,0,0,0,0,0,2.48578814858586,0.137041924646751,0.397429223405979,7.53398471874956,0,0,0.213452994739353,0,0,0,2.05913997434357,0,0.248505071130865,0,1.35904206073614,1.77824838730966,2.95794831145333,0.577901179803038,6.60462317580768,14.5119701625513,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,2.32991899054908,5.35725639689121,4.86253564448882,4.24642326281365,0,0,9.54275627771164,19.0684768556206,4.1795818600905,2.06309154895851,2.49264202817511,0,0,7.77594325222716,0,9.85071341239977,5.6126409304448,0,0,0,0,0,0,3.25799761052228,0,0.653174720218818,0,0,0,0,25.2069841926302,2.65013777824443,11.2476172034549,13.8844231829824,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,7.97461361970287,5.49118192058834,10.516038179346,7.45431954397093,11.6475504113695,19.9950417471255,10.791193525026,0.624902039810533,0,1.14186133417987,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0.604923695052956,0,0.147855149989634,0.159296767163702,0,0.465788870628778,0.414706207840855,0,0,0,0,0.813741466409323,0.181848659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| |||
|short_description=p2@SALL1 | |||
}} |
Revision as of 03:33, 12 January 2014
Short description: | p2@SALL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SALL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_NM_002968, uc010cbv.2, uc010vgs.1_5end |
EntrezGene: | SALL1 |
HGNC: | 10524 |
UniProt: | Q9NSC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.59e-13 | 25 |
kidney tubule cell | 9.03e-10 | 10 |
nephron tubule epithelial cell | 9.03e-10 | 10 |
neuronal stem cell | 1.04e-09 | 8 |
oligodendrocyte | 6.40e-08 | 7 |
macroglial cell | 6.40e-08 | 7 |
astrocyte | 6.40e-08 | 7 |
oligodendrocyte precursor cell | 6.40e-08 | 7 |
glial cell (sensu Vertebrata) | 1.27e-07 | 15 |
glial cell | 1.27e-07 | 15 |
glioblast | 1.27e-07 | 15 |
glioblast (sensu Vertebrata) | 1.27e-07 | 15 |
neuron | 3.48e-07 | 6 |
neuroblast | 3.48e-07 | 6 |
electrically signaling cell | 3.48e-07 | 6 |
kidney cell | 5.52e-07 | 17 |
kidney epithelial cell | 5.52e-07 | 17 |
epithelial cell of nephron | 7.10e-07 | 15 |