FFCP PHASE1:Hg19::chr16:55540105..55540117,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:55540105..55540117,+ | |||
|id=chr16:55540105..55540117,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.82e-17!180;CL:0000057!1.81e-11!75;CL:0000680!2.87e-11!57;CL:0000056!2.87e-11!57;CL:0000355!2.87e-11!57;CL:0000187!4.59e-10!54;CL:0000183!1.37e-09!59;CL:0000393!2.60e-08!60;CL:0000211!2.60e-08!60;CL:0000192!3.33e-08!42;CL:0000514!3.33e-08!42;CL:0002334!8.83e-08!12;CL:0000359!2.17e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002579;4.22e-09;3!CL:0002620;1.68e-08;23!CL:0002615;1.88e-08;3!CL:0000228;5.94e-07;1!CL:0002568;5.94e-07;1!CL:0002372;5.94e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.83e-10,58;CL:0000056,6.83e-10,58;CL:0000355,6.83e-10,58;CL:0002579,3.99e-09,3;CL:0000187,1.28e-08,55;CL:0002620,1.78e-08,23;CL:0002615,2.28e-08,3;CL:0000048,8.67e-08,427;CL:0000393,1.33e-07,61;CL:0000211,1.33e-07,61;CL:0000723,1.36e-07,433;CL:0000034,2.42e-07,441;CL:0000192,2.66e-07,43;CL:0000514,2.66e-07,43;CL:0000057,4.05e-07,76;CL:0002568,4.06e-07,1;CL:0000228,4.57e-07,1;CL:0002372,4.57e-07,1;CL:0000737,8.70e-07,4;CL:0000515,9.21e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.44e-07;1!DOID:2513;5.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.84e-07,1;DOID:2513,6.12e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002385!8.65e-12!63;UBERON:0001015!8.65e-12!63;UBERON:0000383!8.65e-12!63;UBERON:0001134!9.39e-11!61;UBERON:0002036!9.39e-11!61;UBERON:0003082!9.39e-11!61;UBERON:0001637!7.39e-10!42;UBERON:0003509!7.39e-10!42;UBERON:0004572!7.39e-10!42;UBERON:0004872!9.11e-10!84;UBERON:0000486!1.84e-09!82;UBERON:0004290!3.41e-09!70;UBERON:0000914!2.91e-08!83;UBERON:0002329!2.91e-08!83;UBERON:0003077!2.91e-08!83;UBERON:0003059!2.91e-08!83;UBERON:0007282!2.91e-08!83;UBERON:0009618!2.91e-08!83;UBERON:0007285!2.91e-08!83;UBERON:0004573!3.79e-08!33;UBERON:0004571!3.79e-08!33;UBERON:0001981!8.17e-08!60;UBERON:0007500!8.17e-08!60;UBERON:0004537!8.17e-08!60;UBERON:0006965!8.17e-08!60;UBERON:0002049!9.14e-07!79;UBERON:0007798!9.14e-07!79;UBERON:0000475!9.91e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.40e-16;6!UBERON:0002358;7.40e-16;6!UBERON:0003684;7.40e-16;6!UBERON:0001178;7.40e-16;6!UBERON:0004457;1.29e-10;9!UBERON:0000042;1.29e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.49e-16,6;UBERON:0002358,8.49e-16,6;UBERON:0003684,8.49e-16,6;UBERON:0001178,8.49e-16,6;UBERON:0002329,3.07e-09,71;UBERON:0003059,3.07e-09,71;UBERON:0007282,3.07e-09,71;UBERON:0004290,3.07e-09,71;UBERON:0009618,3.07e-09,71;UBERON:0001134,4.00e-09,62;UBERON:0002036,4.00e-09,62;UBERON:0003082,4.00e-09,62;UBERON:0003077,4.43e-09,72;UBERON:0007285,4.43e-09,72;UBERON:0007524,6.33e-09,73;UBERON:0002385,8.92e-09,64;UBERON:0001015,8.92e-09,64;UBERON:0000383,8.92e-09,64;UBERON:0007503,3.29e-08,78;UBERON:0004457,5.91e-08,12;UBERON:0000042,5.91e-08,12;UBERON:0000486,1.40e-07,83 | |||
|phase1_expression=0.908391896352783,0.214100523890983,1.55049844505568,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.722878304769133,0.50133791063589,0,2.3858578411533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.759783069987479,0.397227542439656,0.573673241497627,0,0.560677600142307,1.06748995729705,0,0,0,0,1.21085942115945,0,0.234321431833797,0,1.1409436430889,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0.113432183160021,0,1.2813443329114,2.7551147150743,0.600182192168805,0,0,1.11670113798954,1.35021065793013,0.292311015483596,0.252433774244115,3.77404584433427,0.323292113637624,0.710019185033229,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,3.57656445851882,0,3.98907174877306,0,0.257207374262142,0,0,0.428933980974443,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.723906533337896,0,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.356857977594324,0.315404830067869,0.234282829985426,3.31040709700491,0,0,0,0,0.260650843404249,1.95801157462741,0,0,0,0,0,0,0,1.98486246255021,0.767309866440312,0.280660094433074,4.74114852246094,2.55853624533352,0.160853921143607,0,0.462629081407967,0.532685175939381,0.164254312027618,0,0,0,0,0,0.34444334449382,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0.165018999841176,0,0,0,0.580024309752732,0,0,0,0.107420244868274,0,0,0.267096106940212,0,0,0,0,0,1.5740617341532,0,0.616067160352178,0.532306030317022,2.60979897622522,2.22389062924704,0,0,1.2655176988749,0,0.511795582622668,0.42793898803392,0.318203247925937,0.78494864019923,0,0,0,1.41527737101321,0,0,0.48763373908959,0,1.05650146756755,1.22849920267187,0,0,0.551365343546124,0,0,1.15755106853338,0,0.608731130888112,0,0.281695602532241,0,0,0.35667105148125,0,0,0.987884678879706,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0.91153644677601,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0.144921028610825,0.298509605773748,0,0,0,0.251567901752575,0,0.457680136793847,0,0.310874401165561,0,0.159296767163702,0.899606224327209,0.155262956876259,1.24411862352257,0.265841714557995,0,0.601030435988874,0,0,0,0.214821114084977,0,0,0,0.686791410365586,0.336749488765919,0,0.770479321629213,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,2.22934412268644,0,0,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0,0.358611026963382,0.99798106963804,0,0,1.9307228228694,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr16:55540105..55540117,+ | |||
}} |
Revision as of 03:39, 12 January 2014
Short description: | p@chr16:55540105..55540117, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55540105..55540117, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.83e-10 | 58 |
myoblast | 6.83e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.83e-10 | 58 |
omentum preadipocyte | 3.99e-09 | 3 |
muscle cell | 1.28e-08 | 55 |
skin fibroblast | 1.78e-08 | 23 |
adipocyte of omentum tissue | 2.28e-08 | 3 |
multi fate stem cell | 8.67e-08 | 427 |
electrically responsive cell | 1.33e-07 | 61 |
electrically active cell | 1.33e-07 | 61 |
somatic stem cell | 1.36e-07 | 433 |
stem cell | 2.42e-07 | 441 |
smooth muscle cell | 2.66e-07 | 43 |
smooth muscle myoblast | 2.66e-07 | 43 |
fibroblast | 4.05e-07 | 76 |
mesenchymal stem cell of Wharton's jelly | 4.06e-07 | 1 |
multinucleate cell | 4.57e-07 | 1 |
myotube | 4.57e-07 | 1 |
striated muscle cell | 8.70e-07 | 4 |
skeletal muscle myoblast | 9.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.49e-16 | 6 |
peritoneum | 8.49e-16 | 6 |
abdominal cavity | 8.49e-16 | 6 |
visceral peritoneum | 8.49e-16 | 6 |
somite | 3.07e-09 | 71 |
presomitic mesoderm | 3.07e-09 | 71 |
presumptive segmental plate | 3.07e-09 | 71 |
dermomyotome | 3.07e-09 | 71 |
trunk paraxial mesoderm | 3.07e-09 | 71 |
skeletal muscle tissue | 4.00e-09 | 62 |
striated muscle tissue | 4.00e-09 | 62 |
myotome | 4.00e-09 | 62 |
paraxial mesoderm | 4.43e-09 | 72 |
presumptive paraxial mesoderm | 4.43e-09 | 72 |
dense mesenchyme tissue | 6.33e-09 | 73 |
muscle tissue | 8.92e-09 | 64 |
musculature | 8.92e-09 | 64 |
musculature of body | 8.92e-09 | 64 |
epithelial vesicle | 3.29e-08 | 78 |
cavity lining | 5.91e-08 | 12 |
serous membrane | 5.91e-08 | 12 |
multilaminar epithelium | 1.40e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.84e-07 | 1 |
basal cell carcinoma | 6.12e-07 | 1 |