FFCP PHASE1:Hg19::chr19:17842968..17843001,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr19:17842968..17843001,+ | |||
|id=chr19:17842968..17843001,+ | |||
|ontology_enrichment_celltype=CL:0000840!1.39e-40!5;CL:0001029!1.39e-40!5;CL:0000990!4.54e-27!8;CL:0000451!3.81e-22!10;CL:0001014!3.02e-20!2;CL:0001016!3.02e-20!2;CL:0000453!1.18e-08!5;CL:0002009!2.37e-08!65;CL:0000557!1.43e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.58e-74;5!CL:0000990;5.60e-50;8!CL:0000451;4.07e-41;10!CL:0002594;1.29e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.58e-74,5;CL:0001029,2.58e-74,5;CL:0000990,5.60e-50,8;CL:0000451,4.07e-41,10;CL:0002594,1.29e-13,4;CL:0002194,2.45e-08,59;CL:0000576,2.45e-08,59;CL:0000040,2.45e-08,59;CL:0000559,2.45e-08,59;CL:0002009,4.28e-08,61;CL:0000839,1.49e-07,66;CL:0000557,1.88e-07,67;CL:0000766,5.36e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!9.97e-11!1;DOID:3165!9.97e-11!1;DOID:0060121!9.97e-11!1;DOID:2438!9.97e-11!1;DOID:4418!9.97e-11!1;DOID:3112!1.33e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000998!4.58e-11!1;UBERON:0006868!4.58e-11!1;UBERON:0002204!6.45e-09!167;UBERON:0002021!1.60e-08!5;UBERON:0004765!6.17e-08!101;UBERON:0001434!6.17e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.29e-13;4!UBERON:0010260;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,1.29e-13,4;UBERON:0010260,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.670661236247,135.124676144231,124.714566966696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,3.0982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:17842968..17843001,+ | |||
}} |
Revision as of 22:04, 20 January 2014
Short description: | p@chr19:17842968..17843001, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:17842968..17843001, + |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.58e-74 | 5 |
common dendritic progenitor | 2.58e-74 | 5 |
conventional dendritic cell | 5.60e-50 | 8 |
dendritic cell | 4.07e-41 | 10 |
smooth muscle cell of the umbilical artery | 1.29e-13 | 4 |
monopoietic cell | 2.45e-08 | 59 |
monocyte | 2.45e-08 | 59 |
monoblast | 2.45e-08 | 59 |
promonocyte | 2.45e-08 | 59 |
macrophage dendritic cell progenitor | 4.28e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.49e-07 | 66 |
granulocyte monocyte progenitor cell | 1.88e-07 | 67 |
myeloid leukocyte | 5.36e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 1.29e-13 | 4 |
umbilical blood vessel | 8.85e-07 | 9 |