FFCP PHASE1:Hg19::chr19:45971246..45971265,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2354 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3797 | |||
|TSSclassifier=strong | |||
|UniProt=P53539,E9PHJ3,E7EPR6,E7EXA9,A8VJE1 | |||
|association_with_transcript=0bp_to_ENST00000353609,ENST00000417353,ENST00000443841,ENST00000455928,NM_001114171,NM_006732,uc002pbw.2,uc002pbx.3,uc002pby.3,uc010eka.1,uc010ekb.1,uc010ekc.1,uc010ekd.1,uc010eke.2,uc010ekf.2,uc010ekg.2_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_FOSB_5end | |||
|id=chr19:45971246..45971265,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.65e-23!42;CL:0000860!2.35e-21!45;CL:0000738!8.34e-21!140;CL:0000037!2.58e-18!172;CL:0000566!2.58e-18!172;CL:0000766!8.02e-18!76;CL:0002032!3.04e-16!165;CL:0000837!3.04e-16!165;CL:0000988!1.47e-15!182;CL:0000557!1.52e-15!71;CL:0002031!1.91e-15!124;CL:0002087!9.20e-15!119;CL:0000763!3.92e-14!112;CL:0000049!3.92e-14!112;CL:0002009!1.15e-13!65;CL:0000839!1.22e-13!70;CL:0002194!1.25e-12!63;CL:0000576!1.25e-12!63;CL:0000040!1.25e-12!63;CL:0000559!1.25e-12!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-17;33!CL:0002057;1.19e-17;33!CL:0000576;9.25e-12;48!CL:0000473;2.29e-11;39!CL:0000234;2.29e-11;39!CL:0000766;3.52e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.01e-23,42;CL:0002057,2.01e-23,42;CL:0000738,3.24e-21,136;CL:0000473,4.85e-19,48;CL:0000234,4.85e-19,48;CL:0000766,9.10e-19,72;CL:0000037,1.90e-18,168;CL:0000557,2.03e-16,67;CL:0002032,2.35e-16,161;CL:0000837,2.35e-16,161;CL:0000988,3.16e-16,177;CL:0002031,9.04e-16,120;CL:0002087,4.39e-15,115;CL:0000763,1.70e-14,108;CL:0000049,1.70e-14,108;CL:0002009,1.71e-14,61;CL:0000839,2.07e-14,66;CL:0002194,2.05e-13,59;CL:0000576,2.05e-13,59;CL:0000040,2.05e-13,59;CL:0000559,2.05e-13,59 | |||
|ontology_enrichment_development_v019=CL:0002057;5.13e-17;42 | |||
|ontology_enrichment_disease=DOID:0050686!1.37e-09!137;DOID:162!2.95e-09!235;DOID:0050687!2.23e-08!143;DOID:14566!2.33e-08!239;DOID:120!7.05e-08!27;DOID:193!7.64e-08!29;DOID:305!1.62e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:120;6.61e-08;27!DOID:193;7.21e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.58e-09,137;DOID:162,5.77e-09,235;DOID:0050687,2.72e-08,143;DOID:14566,4.19e-08,239;DOID:120,6.50e-08,27;DOID:193,7.06e-08,29;DOID:305,2.28e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.09e-14!80;UBERON:0001474!2.81e-14!86;UBERON:0002390!4.00e-14!102;UBERON:0003061!4.00e-14!102;UBERON:0002193!1.00e-10!112;UBERON:0004765!5.34e-10!101;UBERON:0001434!5.34e-10!101;UBERON:0002405!7.61e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.65e-15,76;UBERON:0001474,6.14e-15,82;UBERON:0002390,9.46e-15,98;UBERON:0003061,9.46e-15,98;UBERON:0004765,4.49e-14,90;UBERON:0002193,2.89e-11,108;UBERON:0002405,4.23e-11,93;UBERON:0001434,4.60e-11,100;UBERON:0002384,2.62e-07,371 | |||
|phase1_expression=1.99846217197612,0.214100523890983,3.10099689011137,0,0.446961094427288,1.74467704820074,2.53299878168311,1.26343974685366,0.522371256399677,15.7269719360966,6.28021051175185,0,0.527533956456907,137.256885432692,197.18143855811,2.6893005858071,0,1.46062018077475,2.43966399395253,0.123121058076788,0.612002073732759,3.76145665773705,0.286235987131057,0.273748850145768,1.75759695432724,0.993374274723366,0.903106483949403,0.236132343941038,5231.35151781357,2573.19228484371,2531.08880009453,4.59710612239464,2.409647350226,16.2691764473387,28.2755282118101,13.2217386213302,697.594643859597,1036.52540936314,1638.64868027853,1693.98685680794,0.895661896959697,1.6194683300949,0,252.411342521324,287.185717203495,532.472014307256,826.052797162803,884.422127134947,1536.14359963971,831.143321418693,844.049528013387,1338.48942116939,1905.75412311203,2119.1262162057,2727.48944001004,872.503243779973,686.358967395482,995.30031260728,2107.38759897366,2233.02417039546,3579.00923022303,222.319776325847,356.042628854613,606.091595257491,698.82384661763,482.277440987469,964.751663694146,1118.55905772302,1393.9238409372,1769.871895502,442.547036424993,868.766943294665,1157.9358756462,335.684649949675,437.327045028095,349.920279353479,380.906388217765,580.28351393958,403.099771436277,231.145335174153,181.014176251172,238.559384816612,10.5597746676794,7.09980194640771,7.11607403090844,55.4749289336459,5.60554381850417,18.9668305184979,9.25462821898807,4.77026877267682,1413.35580229876,996.541510362483,1250.79800242575,721.655454041481,873.272341125233,349.774064581302,1075.41231321233,2043.65596629566,1352.24105891977,5.85152733867373,187.079381047681,115.99471240501,284.447023475551,52.0286833653761,216.24073608653,139.344819693098,270.262256037486,19.341789278577,41.0987538289215,7.72858151637278,8.29050053357545,8.98389565778663,524.341287341046,351.281107281793,487.135540931192,13.4838117810104,544.939541901932,508.912246759775,894.930650672982,4.77848121486145,4.55758417699493,5.70271226669025,51.1955404864427,10.2389288923535,14.9916871862815,10.8917535940248,5.74789597844733,1660.4331371989,2160.38190153917,1535.42832996543,348.643818828965,85.8497100420654,18.4122089054684,31.0837671050727,0,14.774344934004,10.3387173116643,59.3694541769216,10.8715039738678,9.09090529596512,27.4044531362553,102.098189350467,2.5500670180478,0.370784442784429,0.97364218096405,2.26368658489047,2.6591592103773,220.842318106747,141.282742962692,127.78138045737,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,0,2.34304428935269,0.805658634218294,0,1.46437234528902,0.367663080345869,2.43042584364528,0.267899184852239,0,0.225222960966644,0,0.949265659568129,1.09921046358244,1211.06203623742,2256.88113734325,1.74437620857014,172.449267238276,2.5326102332916,160.877154688061,143.705146995156,11.7040566125458,2.24271040056923,7.47242970107935,22.2000793575444,0,0.67355336034844,0.490385709340376,0.302714855289863,70.2934627865599,0,19.9782449171405,0.570471821544449,16.7382522218017,0,0.485618833104395,0.421352420106746,1.02077085627447,0.122834317311768,3.09977343527296,8.31602000097437,5.68713937340681,5.46096817162816,0,0,0.125118519871964,1.38532057742091,1.75591048352335,1.22595118319608,3.45547535485173,26.2028343099649,120.191055911538,1.49490172172997,0.635795703478686,102.631154860866,0.515262646192195,418.923518114193,0.37223371266318,73.0801518604683,0.0974370051611986,218.355214721159,0.552299391853796,0.646584227275248,451.217192088617,0.10075209822764,0,0.773043412653187,0.545492241181669,0,3.65921118388786,10.7349112340403,6.62305474356255,5.70135802584537,4.54177531576131,4.01475094983413,3.12899064659632,0,0,520.092079395817,145.819655297256,1.30137480043828,0.674338760312407,0.964044119533928,2.20587945464788,1.52515610864684,2.13543557199987,6.87639671616838,6.27908688401107,12.3119090222845,0,2.80483547606892,5.3504621473082,10.2906097969879,34.2238594018943,57.0039785673023,129.973779469909,31.3438800584402,2.7057456479485,26.4214427859729,0.878002283269004,3.37205259772859,4.62433273093502,11.3883787544991,1.62904152655162,1.03993478527958,1.44331342025273,2.66639931442677,15.0283128621852,5.63029146268188,17.5934494779112,0.570762456703795,9.4824527755113,11.1603201072333,0,0.468008530278475,0.743155811443641,0,0,0.992425680696705,27.9422590832887,22.669447204089,1.53353071666084,60.1049150233051,7.57216532513744,13086.1359967025,6739.19314173053,12057.2885741201,21.6527819536296,1.52795370223311,2.34434894420094,8.55362230113526,0.719792448923265,0,0.857479297891735,0.224262168690721,0.87192013766656,1.9067954313447,209.161636096084,0,24.513779824124,2.92531928243358,0,0,0,0.799266537048298,286.813855278244,1.08524321078289,0,11.7265026345745,230.29398278517,44.349304884272,0.602878754119172,0,0.99972991182057,20.6760427090024,29.1309113030633,84.3335757932126,0.239624855491583,0,24.2482738569221,0.434343920002738,1.02738161275192,0.1790609632398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| |||
|short_description=p1@FOSB | |||
}} |
Revision as of 23:55, 20 January 2014
Short description: | p1@FOSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOSB_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_ENST00000353609, ENST00000417353, ENST00000443841, ENST00000455928, NM_001114171, NM_006732, uc002pbw.2, uc002pbx.3, uc002pby.3, uc010eka.1, uc010ekb.1, uc010ekc.1, uc010ekd.1, uc010eke.2, uc010ekf.2, uc010ekg.2_5end |
EntrezGene: | FOSB |
HGNC: | 3797 |
UniProt: | P53539E9PHJ3E7EPR6E7EXA9A8VJE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.01e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-23 | 42 |
leukocyte | 3.24e-21 | 136 |
defensive cell | 4.85e-19 | 48 |
phagocyte | 4.85e-19 | 48 |
myeloid leukocyte | 9.10e-19 | 72 |
hematopoietic stem cell | 1.90e-18 | 168 |
granulocyte monocyte progenitor cell | 2.03e-16 | 67 |
hematopoietic oligopotent progenitor cell | 2.35e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.35e-16 | 161 |
hematopoietic cell | 3.16e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 9.04e-16 | 120 |
nongranular leukocyte | 4.39e-15 | 115 |
myeloid cell | 1.70e-14 | 108 |
common myeloid progenitor | 1.70e-14 | 108 |
macrophage dendritic cell progenitor | 1.71e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.07e-14 | 66 |
monopoietic cell | 2.05e-13 | 59 |
monocyte | 2.05e-13 | 59 |
monoblast | 2.05e-13 | 59 |
promonocyte | 2.05e-13 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.65e-15 | 76 |
bone element | 6.14e-15 | 82 |
hematopoietic system | 9.46e-15 | 98 |
blood island | 9.46e-15 | 98 |
skeletal element | 4.49e-14 | 90 |
hemolymphoid system | 2.89e-11 | 108 |
immune system | 4.23e-11 | 93 |
skeletal system | 4.60e-11 | 100 |
connective tissue | 2.62e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.58e-09 | 137 |
cancer | 5.77e-09 | 235 |
cell type cancer | 2.72e-08 | 143 |
disease of cellular proliferation | 4.19e-08 | 239 |
female reproductive organ cancer | 6.50e-08 | 27 |
reproductive organ cancer | 7.06e-08 | 29 |
carcinoma | 2.28e-07 | 106 |