FFCP PHASE1:Hg19::chr19:54868001..54868008,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=3903 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6477 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-380bp_to_ENST00000456960_5end | |||
|description=CAGE_peak_9_at_LAIR1_5end | |||
|id=chr19:54868001..54868008,- | |||
|ontology_enrichment_celltype=CL:0000839!4.06e-49!70;CL:0000557!2.94e-48!71;CL:0002057!6.26e-47!42;CL:0000766!2.69e-44!76;CL:0002194!3.22e-44!63;CL:0000576!3.22e-44!63;CL:0000040!3.22e-44!63;CL:0000559!3.22e-44!63;CL:0000860!3.72e-43!45;CL:0002009!1.59e-42!65;CL:0002031!9.31e-32!124;CL:0000763!7.77e-31!112;CL:0000049!7.77e-31!112;CL:0002087!7.23e-27!119;CL:0000738!1.37e-26!140;CL:0002032!5.10e-24!165;CL:0000837!5.10e-24!165;CL:0000037!1.17e-23!172;CL:0000566!1.17e-23!172;CL:0000988!1.39e-21!182;CL:0002619!6.93e-09!3;CL:0002393!1.66e-08!9;CL:0002397!1.66e-08!9;CL:0002274!1.99e-08!5;CL:0000457!1.99e-08!5;CL:0002191!1.99e-08!5;CL:0000097!1.99e-08!5;CL:0000831!1.99e-08!5;CL:0002028!1.99e-08!5;CL:0000875!1.61e-07!3;CL:0002396!1.61e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.31e-34;3!CL:0000097;2.35e-20;5!CL:0000860;4.11e-20;33!CL:0002057;4.11e-20;33!CL:0000576;1.40e-19;48!CL:0000473;3.05e-13;39!CL:0000234;3.05e-13;39!CL:0000766;1.13e-12;69!CL:0000163;1.38e-11;9!CL:0000763;1.97e-10;100!CL:0002087;2.17e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,9.90e-35,3;CL:0000839,1.64e-30,66;CL:0000557,4.90e-30,67;CL:0000766,7.45e-28,72;CL:0002194,5.23e-21,59;CL:0000576,5.23e-21,59;CL:0000040,5.23e-21,59;CL:0000559,5.23e-21,59;CL:0002009,2.78e-20,61;CL:0000097,3.17e-20,5;CL:0002028,3.17e-20,5;CL:0002031,1.38e-18,120;CL:0000763,4.94e-18,108;CL:0000049,4.94e-18,108;CL:0000738,3.55e-16,136;CL:0000860,4.94e-16,42;CL:0002057,4.94e-16,42;CL:0000473,6.38e-14,48;CL:0000234,6.38e-14,48;CL:0002032,2.33e-13,161;CL:0000837,2.33e-13,161;CL:0000037,1.02e-12,168;CL:0002087,3.74e-12,115;CL:0000988,5.75e-12,177;CL:0000163,1.63e-11,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.06e-10;42!CL:0000049;3.04e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.85e-44!80;UBERON:0001474!8.57e-42!86;UBERON:0002390!3.18e-41!102;UBERON:0003061!3.18e-41!102;UBERON:0002193!2.76e-38!112;UBERON:0002405!9.61e-37!115;UBERON:0004765!1.89e-35!101;UBERON:0001434!1.89e-35!101;UBERON:0002204!1.60e-16!167;UBERON:0003081!6.75e-15!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.16e-09;5!UBERON:0005057;1.16e-09;5!UBERON:0002370;9.53e-07;2!UBERON:0005058;9.53e-07;2!UBERON:0009113;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.68e-30,98;UBERON:0003061,3.68e-30,98;UBERON:0002405,4.95e-28,93;UBERON:0002193,3.31e-27,108;UBERON:0002371,2.60e-26,76;UBERON:0001474,2.82e-24,82;UBERON:0004765,5.62e-22,90;UBERON:0001434,1.30e-19,100;UBERON:0003081,1.57e-13,203;UBERON:0002204,5.30e-11,167;UBERON:0000926,6.62e-08,315;UBERON:0004120,6.62e-08,315;UBERON:0006603,6.62e-08,315;UBERON:0004177,3.79e-07,7;UBERON:0005057,3.79e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,5.82180233023803,2.91504299417082,5.92423805558629,0.726991193897824,1.51150377475524,2.18325655069035,0.232429036905685,0.411167888021826,0.929119112685311,0.28769239232215,0,0.236482229888585,0.689491361473237,0,1.35426486594342,0.941211697713023,1.36453075028923,0.674170453335254,4.89734227793444,5.45579346029359,3.19668562899521,0.659702600373432,0.598390972864896,0,0,0.56738522469114,1.24564449799115,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0.633765858935825,0.212604299965044,0.209658645508376,0,0,0.48217676009124,0.285012743741249,0.39783335439818,0.547992461293902,0,0.546138611262131,0,0,0,0,1.32208974556972,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.384273959177026,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0,0.528290604079356,1.24396869324463,1.15295962733569,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.591092280605782,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0.655745261419609,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03382309777839,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,1.67931165573616,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p9@LAIR1 | |||
}} |
Revision as of 01:04, 21 January 2014
Short description: | p9@LAIR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_LAIR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -380bp_to_ENST00000456960_5end |
EntrezGene: | LAIR1 |
HGNC: | 6477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 9.90e-35 | 3 |
myeloid lineage restricted progenitor cell | 1.64e-30 | 66 |
granulocyte monocyte progenitor cell | 4.90e-30 | 67 |
myeloid leukocyte | 7.45e-28 | 72 |
monopoietic cell | 5.23e-21 | 59 |
monocyte | 5.23e-21 | 59 |
monoblast | 5.23e-21 | 59 |
promonocyte | 5.23e-21 | 59 |
macrophage dendritic cell progenitor | 2.78e-20 | 61 |
mast cell | 3.17e-20 | 5 |
basophil mast progenitor cell | 3.17e-20 | 5 |
hematopoietic lineage restricted progenitor cell | 1.38e-18 | 120 |
myeloid cell | 4.94e-18 | 108 |
common myeloid progenitor | 4.94e-18 | 108 |
leukocyte | 3.55e-16 | 136 |
classical monocyte | 4.94e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.94e-16 | 42 |
defensive cell | 6.38e-14 | 48 |
phagocyte | 6.38e-14 | 48 |
hematopoietic oligopotent progenitor cell | 2.33e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.33e-13 | 161 |
hematopoietic stem cell | 1.02e-12 | 168 |
nongranular leukocyte | 3.74e-12 | 115 |
hematopoietic cell | 5.75e-12 | 177 |
endocrine cell | 1.63e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.68e-30 | 98 |
blood island | 3.68e-30 | 98 |
immune system | 4.95e-28 | 93 |
hemolymphoid system | 3.31e-27 | 108 |
bone marrow | 2.60e-26 | 76 |
bone element | 2.82e-24 | 82 |
skeletal element | 5.62e-22 | 90 |
skeletal system | 1.30e-19 | 100 |
lateral plate mesoderm | 1.57e-13 | 203 |
musculoskeletal system | 5.30e-11 | 167 |
mesoderm | 6.62e-08 | 315 |
mesoderm-derived structure | 6.62e-08 | 315 |
presumptive mesoderm | 6.62e-08 | 315 |
hemopoietic organ | 3.79e-07 | 7 |
immune organ | 3.79e-07 | 7 |