FFCP PHASE1:Hg19::chr2:55844803..55844823,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29267 | |||
|TSSclassifier=strong | |||
|UniProt=Q5MIZ7 | |||
|association_with_transcript=-7bp_to_NM_001122964,NM_020463_5end | |||
|description=CAGE_peak_2_at_SMEK2_5end | |||
|id=chr2:55844803..55844823,- | |||
|ontology_enrichment_celltype=CL:0000037!3.93e-10!172;CL:0000566!3.93e-10!172;CL:0002032!1.01e-08!165;CL:0000837!1.01e-08!165;CL:0000988!1.44e-08!182;CL:0000738!4.52e-08!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.30e-10,168;CL:0000988,9.44e-09,177;CL:0002032,1.14e-08,161;CL:0000837,1.14e-08,161;CL:0000738,4.34e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.64e-15!235;DOID:14566!3.12e-15!239;DOID:305!3.86e-14!106;DOID:0050687!2.17e-13!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.60e-15,235;DOID:14566,9.36e-15,239;DOID:305,3.78e-14,106;DOID:0050687,2.93e-13,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@SMEK2 | |||
}} |
Revision as of 03:16, 21 January 2014
Short description: | p2@SMEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMEK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_NM_001122964, NM_020463_5end |
EntrezGene: | SMEK2 |
HGNC: | 29267 |
UniProt: | Q5MIZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.30e-10 | 168 |
hematopoietic cell | 9.44e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.14e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-08 | 161 |
leukocyte | 4.34e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.60e-15 | 235 |
disease of cellular proliferation | 9.36e-15 | 239 |
carcinoma | 3.78e-14 | 106 |
cell type cancer | 2.93e-13 | 143 |