FFCP PHASE1:Hg19::chr2:176995011..176995029,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3234 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5139 | |||
|TSSclassifier=strong | |||
|UniProt=F8VSA3 | |||
|association_with_transcript=-23bp_to_ENST00000548663_5end | |||
|description=CAGE_peak_6_at_HOXD8_5end | |||
|id=chr2:176995011..176995029,+ | |||
|ontology_enrichment_celltype=CL:0002620!3.51e-09!23;CL:0000667!1.66e-08!6;CL:0000058!1.66e-08!6;CL:0000138!1.66e-08!6;CL:0002681!4.24e-07!13;CL:0002584!4.24e-07!13;CL:0000153!4.54e-07!9;CL:0000447!4.54e-07!9;CL:1000497!6.92e-07!18;CL:0002518!6.92e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000228;2.71e-19;1!CL:0000222;2.71e-19;1!CL:0002372;2.71e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.25e-19,1;CL:0002372,3.25e-19,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.48e-10;2!UBERON:0009117;3.03e-08;10!UBERON:0005564;3.03e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!6.11e-09!27;UBERON:0003918!6.11e-09!27;UBERON:0005095!6.11e-09!27;UBERON:0007687!6.11e-09!27;UBERON:0001851!3.18e-08!16;UBERON:0002097!4.42e-08!40;UBERON:0000489!5.55e-08!32;UBERON:0006555!1.61e-07!17;UBERON:0005103!1.61e-07!17;UBERON:0000083!1.61e-07!17;UBERON:0009201!1.61e-07!17;UBERON:0004819!1.61e-07!17;UBERON:0006553!1.61e-07!17;UBERON:0003074!1.61e-07!17;UBERON:0003060!1.61e-07!17;UBERON:0002199!2.19e-07!45;UBERON:0002416!2.19e-07!45;UBERON:0001225!4.24e-07!13;UBERON:0008987!4.24e-07!13;UBERON:0000080!5.99e-07!18;UBERON:0002120!5.99e-07!18;UBERON:0004875!5.99e-07!18;UBERON:0005721!5.99e-07!18;UBERON:0005754!5.99e-07!18;UBERON:0007297!5.99e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.71e-19;1!UBERON:0003135;1.76e-15;11!UBERON:0000473;4.41e-10;8!UBERON:0000991;2.10e-08;21!UBERON:0003101;4.77e-08;22!UBERON:0000079;4.77e-08;22!UBERON:0006947;2.63e-07;3!UBERON:0004054;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.56e-19,1;UBERON:0003135,1.25e-15,11;UBERON:0000473,3.68e-10,8;UBERON:0005103,5.06e-10,8;UBERON:0000083,5.06e-10,8;UBERON:0009201,5.06e-10,8;UBERON:0006553,5.06e-10,8;UBERON:0003074,5.06e-10,8;UBERON:0003060,5.06e-10,8;UBERON:0000080,5.20e-09,9;UBERON:0002120,5.20e-09,9;UBERON:0004875,5.20e-09,9;UBERON:0005721,5.20e-09,9;UBERON:0005754,5.20e-09,9;UBERON:0007297,5.20e-09,9;UBERON:0003886,1.64e-08,54;UBERON:0000991,1.80e-08,21;UBERON:0009196,1.80e-08,21;UBERON:0009117,1.80e-08,21;UBERON:0005564,1.80e-08,21;UBERON:0003101,4.03e-08,22;UBERON:0000079,4.03e-08,22;UBERON:0004176,4.13e-08,22;UBERON:0002553,1.55e-07,61;UBERON:0004876,1.56e-07,11;UBERON:0006947,2.19e-07,3;UBERON:0004054,2.19e-07,3;UBERON:0003887,5.64e-07,12 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0.087834785693126,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0.976248230192678,0.367663080345869,0.81014194788176,0.267899184852239,0,0.450445921933289,0,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0.485618833104395,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.337552664482532,0.194874010322397,0.252433774244115,0.460249493211497,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0.154048617114644,0.614014698904518,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36387681767936,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,1.92199335066233,0.171986032471617,0,0,0,0,0.794305140223502,0,0.274083849293502,0.596143835108969,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.551639951094387,0.209818352539992,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.655745261419609,0.471162288750703,0,0,0,0,0,0.124192805882767,0,0,0,1.14186133417987,0,0,0.28984205722165,0.298509605773748,0,0.554805861502613,0,0,0.889811221596536,0,0,0,0,0,0,0,0.414706207840855,0.53168342911599,0,0,0,0,0.363697318405119,0,1.85613503951397,0.398095888698616,0,0,0.336749488765919,1.26184898228651,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.368211900503681,0,0,0.255788742607303,0.215649622793364,0,0.218419276384028,0,0,0.123935764259002,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.11796972334774,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0.301925687133347,0,0.218559560503957,1.41095188908457,0,0,0,0,0.4226557275834,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,1.97024615367422,4.55539021265503,0,0,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@HOXD8 | |||
}} |
Revision as of 06:46, 21 January 2014
Short description: | p6@HOXD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOXD8_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000548663_5end |
EntrezGene: | HOXD8 |
HGNC: | 5139 |
UniProt: | F8VSA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.25e-19 | 1 |
myotube | 3.25e-19 | 1 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.56e-19 | 1 |
male reproductive organ | 1.25e-15 | 11 |
testis | 3.68e-10 | 8 |
mesonephric epithelium | 5.06e-10 | 8 |
mesonephric tubule | 5.06e-10 | 8 |
nephric duct | 5.06e-10 | 8 |
renal duct | 5.06e-10 | 8 |
mesonephric duct | 5.06e-10 | 8 |
pronephric duct | 5.06e-10 | 8 |
mesonephros | 5.20e-09 | 9 |
pronephros | 5.20e-09 | 9 |
nephrogenic cord | 5.20e-09 | 9 |
pronephric mesoderm | 5.20e-09 | 9 |
rostral part of nephrogenic cord | 5.20e-09 | 9 |
presumptive pronephric mesoderm | 5.20e-09 | 9 |
body cavity precursor | 1.64e-08 | 54 |
gonad | 1.80e-08 | 21 |
indifferent external genitalia | 1.80e-08 | 21 |
indifferent gonad | 1.80e-08 | 21 |
gonad primordium | 1.80e-08 | 21 |
male organism | 4.03e-08 | 22 |
male reproductive system | 4.03e-08 | 22 |
external genitalia | 4.13e-08 | 22 |
anatomical cavity | 1.55e-07 | 61 |
urogenital ridge | 1.56e-07 | 11 |
male genital duct | 2.19e-07 | 3 |
internal male genitalia | 2.19e-07 | 3 |
intraembryonic coelom | 5.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.58e-10 | 2 |