FFCP PHASE1:Hg19::chr2:208259497..208259500,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1614 | |||
|description=CAGE_peak_at_chr2:208259497..208259500,- | |||
|id=chr2:208259497..208259500,- | |||
|ontology_enrichment_celltype=CL:0000220!5.68e-14!246;CL:0002321!1.14e-13!248;CL:0000144!1.71e-12!625;CL:0000548!3.85e-12!679;CL:0000004!3.85e-12!679;CL:0000255!3.85e-12!679;CL:0000012!6.96e-12!682;CL:0002371!1.40e-11!591;CL:0002368!5.83e-10!13;CL:0000066!1.05e-09!254;CL:0002076!1.63e-09!43;CL:0000003!1.15e-08!722;CL:0002494!5.07e-08!16;CL:0000063!5.49e-08!578;CL:0000223!5.59e-08!59;CL:0002159!2.44e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.22e-23;13!CL:0002202;6.81e-16;9!CL:0002632;6.81e-16;9!CL:0002076;4.86e-14;42!CL:0002328;1.23e-13;3!CL:0000244;4.37e-10;4!CL:0000731;4.37e-10;4!CL:0002159;1.09e-09;14!CL:0000317;2.21e-09;2!CL:1000448;2.21e-09;2!CL:0002308;2.21e-09;2!CL:0002140;2.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,8.79e-24,13;CL:0002076,6.23e-18,42;CL:0002202,6.09e-16,9;CL:0002632,6.09e-16,9;CL:0000223,9.11e-14,58;CL:0002328,1.21e-13,3;CL:0000244,3.89e-10,4;CL:0000731,3.89e-10,4;CL:0002159,6.67e-10,14;CL:0000317,2.31e-09,2;CL:1000448,2.31e-09,2;CL:0002308,2.31e-09,2;CL:0002140,2.31e-09,2;CL:0000066,1.51e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000223;2.48e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.09e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-12;14!DOID:120;7.85e-08;27!DOID:193;3.31e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.72e-12,14;DOID:120,8.40e-08,27;DOID:193,3.53e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.95e-11!84;UBERON:0004535!2.01e-10!110;UBERON:0002049!3.10e-10!79;UBERON:0007798!3.10e-10!79;UBERON:0001637!5.69e-10!42;UBERON:0003509!5.69e-10!42;UBERON:0004572!5.69e-10!42;UBERON:0003914!6.43e-10!118;UBERON:0001009!8.22e-10!113;UBERON:0000055!8.85e-10!69;UBERON:0001981!7.14e-09!60;UBERON:0007500!7.14e-09!60;UBERON:0004537!7.14e-09!60;UBERON:0006965!7.14e-09!60;UBERON:0000119!2.56e-08!312;UBERON:0004573!1.42e-07!33;UBERON:0004571!1.42e-07!33;UBERON:0000483!1.74e-07!309;UBERON:0005910!3.04e-07!6;UBERON:0002118!8.23e-07!5;UBERON:0004532!8.23e-07!5;UBERON:0000365!8.98e-07!5;UBERON:0000486!9.67e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.23e-13;3!UBERON:0002031;1.23e-13;3!UBERON:0002419;2.21e-09;2!UBERON:0007771;2.21e-09;2!UBERON:0003297;2.21e-09;2!UBERON:0001821;2.21e-09;2!UBERON:0003487;2.21e-09;2!UBERON:0001820;2.21e-09;2!UBERON:0007196;2.94e-09;15!UBERON:0001558;2.94e-09;15!UBERON:0000486;1.58e-08;12!UBERON:0002185;2.46e-08;5!UBERON:0000365;3.83e-08;5!UBERON:0005911;4.48e-08;36!UBERON:0002118;2.69e-07;5!UBERON:0000992;5.29e-07;13!UBERON:0005910;7.65e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.21e-13,3;UBERON:0002031,1.21e-13,3;UBERON:0002419,2.31e-09,2;UBERON:0007771,2.31e-09,2;UBERON:0003297,2.31e-09,2;UBERON:0001821,2.31e-09,2;UBERON:0003487,2.31e-09,2;UBERON:0001820,2.31e-09,2;UBERON:0005089,2.31e-09,2;UBERON:0005088,2.31e-09,2;UBERON:0007196,2.75e-09,15;UBERON:0001558,2.75e-09,15;UBERON:0002185,2.44e-08,5;UBERON:0000365,3.49e-08,5;UBERON:0002118,2.04e-07,5;UBERON:0000992,5.64e-07,13;UBERON:0005910,7.08e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,1.72013755551056,3.48900583986214,0.218441372130172,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,7.35536979583142,8.433765725791,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58923153089935,1.5369642391746,2.60130452877444,0,0,0,0,0,0,0.306083892370903,0.641858054152187,1.27867425159808,0,0,0,0.580418477257168,0,0,0.251248665256743,0.521482918420201,1.08594422352558,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.527008714158756,0,2.91436230634034,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0.366403487860815,0,0,1.74437620857014,0,0,20.9206505684886,1.14734648299525,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0.504867548488229,0,0,0,0.10075209822764,0,0.966304265816484,3.27295344709002,3.44165514466805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,1.54411029268673,2.63400684980701,0,0.904760751704678,1.574003567695,0,0,0,0.34779121492523,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,1.87467667973554,0.335964256397719,1.84307626415102,0,0,2.30029607499127,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,1.3996218765488,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,2.00506470303285,0.828728900423067,0,0.182091168006717,0,0,0.539107359730903,0,0,0.316654886678627,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,3.44559322797703,3.25030123018261,1.6068392984416,0,0,0,0.275673144969061,0,0,0.170453254832202,0,1.4875642382488,0.768760269460425,16.4620399118014,1.6185244936888,0,5.35180989612088,0.6970372701606,0.308033580176089,0,0,0.37064843820784,2.14687330112987,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0.92947049429925,0.281695602532241,0,0,0,0,0,0,0,0,1.34710957815717,3.35151137767894,0,0,4.3050537267123,3.36942951335251,3.54744122829341,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0.957003479195758,0,0,0,0,0,0,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,1.56706571844725,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.50313580350515,0,0.915360273587694,0.604923695052956,0.15543720058278,1.47855149989634,1.27437413730962,0.449803112163605,1.24210365501008,0,0.53168342911599,0,3.00515217994437,2.28483127301277,1.62748293281865,1.45478927362048,0.214821114084977,0.928067519756987,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,1.27078232765372,0,0.690359926060101,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:208259497..208259500,- | |||
}} |
Revision as of 08:07, 21 January 2014
Short description: | p@chr2:208259497..208259500, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:208259497..208259500, - |
Coexpression cluster: | C1614_Fibroblast_Small_Bronchial_Mallassezderived_Tracheal_Sebocyte_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 8.79e-24 | 13 |
endo-epithelial cell | 6.23e-18 | 42 |
epithelial cell of tracheobronchial tree | 6.09e-16 | 9 |
epithelial cell of lower respiratory tract | 6.09e-16 | 9 |
endodermal cell | 9.11e-14 | 58 |
bronchial epithelial cell | 1.21e-13 | 3 |
transitional epithelial cell | 3.89e-10 | 4 |
urothelial cell | 3.89e-10 | 4 |
general ecto-epithelial cell | 6.67e-10 | 14 |
sebum secreting cell | 2.31e-09 | 2 |
epithelial cell of sweat gland | 2.31e-09 | 2 |
epithelial cell of skin gland | 2.31e-09 | 2 |
acinar cell of sebaceous gland | 2.31e-09 | 2 |
epithelial cell | 1.51e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.21e-13 | 3 |
epithelium of bronchus | 1.21e-13 | 3 |
skin gland | 2.31e-09 | 2 |
epidermis gland | 2.31e-09 | 2 |
gland of integumental system | 2.31e-09 | 2 |
sebaceous gland | 2.31e-09 | 2 |
skin sebaceous gland | 2.31e-09 | 2 |
sweat gland | 2.31e-09 | 2 |
sweat gland placode | 2.31e-09 | 2 |
sebaceous gland placode | 2.31e-09 | 2 |
tracheobronchial tree | 2.75e-09 | 15 |
lower respiratory tract | 2.75e-09 | 15 |
bronchus | 2.44e-08 | 5 |
urothelium | 3.49e-08 | 5 |
right ovary | 2.04e-07 | 5 |
female gonad | 5.64e-07 | 13 |
transitional epithelium | 7.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.72e-12 | 14 |
female reproductive organ cancer | 8.40e-08 | 27 |
reproductive organ cancer | 3.53e-07 | 29 |