FFCP PHASE1:Hg19::chr2:230786679..230786758,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9320 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12306 | |||
|TSSclassifier=strong | |||
|UniProt=Q14669,F8W9P3,Q14CA3,B4DYJ6 | |||
|association_with_transcript=0bp_to_ENST00000283943,ENST00000343290,ENST00000389044,ENST00000479037,ENST00000543084_5end | |||
|description=CAGE_peak_1_at_TRIP12_5end | |||
|id=chr2:230786679..230786758,- | |||
|ontology_enrichment_celltype=CL:0000766!1.54e-13!76;CL:0002009!2.08e-13!65;CL:0002194!5.85e-13!63;CL:0000576!5.85e-13!63;CL:0000040!5.85e-13!63;CL:0000559!5.85e-13!63;CL:0000839!1.70e-12!70;CL:0002057!2.54e-12!42;CL:0000557!1.87e-11!71;CL:0000860!7.81e-10!45;CL:0000763!1.86e-09!112;CL:0000049!1.86e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-13;33!CL:0002057;1.61e-13;33!CL:0000473;8.12e-13;39!CL:0000234;8.12e-13;39!CL:0000576;3.76e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.82e-16,61;CL:0000766,8.79e-16,72;CL:0002194,1.95e-15,59;CL:0000576,1.95e-15,59;CL:0000040,1.95e-15,59;CL:0000559,1.95e-15,59;CL:0000839,9.69e-15,66;CL:0000473,6.23e-14,48;CL:0000234,6.23e-14,48;CL:0000557,1.51e-13,67;CL:0000860,2.54e-12,42;CL:0002057,2.54e-12,42;CL:0000763,7.92e-11,108;CL:0000049,7.92e-11,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.52e-15!115;UBERON:0002390!8.10e-12!102;UBERON:0003061!8.10e-12!102;UBERON:0002193!5.33e-11!112;UBERON:0004765!1.36e-08!101;UBERON:0001434!1.36e-08!101;UBERON:0002371!2.90e-08!80;UBERON:0001474!4.11e-08!86;UBERON:0002405!6.82e-08!115;UBERON:0000062!1.15e-07!511;UBERON:0000467!1.60e-07!625;UBERON:0000480!1.99e-07!626;UBERON:0000468!3.81e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-14,114;UBERON:0002390,1.67e-13,98;UBERON:0003061,1.67e-13,98;UBERON:0002193,1.63e-12,108;UBERON:0001434,2.70e-10,100;UBERON:0004765,5.86e-10,90;UBERON:0002371,8.38e-10,76;UBERON:0002405,1.27e-09,93;UBERON:0001474,1.45e-09,82;UBERON:0002204,7.59e-07,167 | |||
|phase1_expression=13.4442000660212,21.8382534368803,25.0898839290829,18.0131937035635,21.4541325325098,20.0637860543085,7.59899634504932,17.6881564559513,15.4099520637905,7.12628415854376,3.48900583986214,19.8781648638457,11.605747042052,33.0456162403324,32.4769428213357,13.4465029290355,13.8619741445515,18.9880623500717,20.4931775492013,12.9277110980627,14.6880497695862,9.09018692286455,32.9171385200715,32.7129875924193,29.3769776651839,28.0437199094981,28.817306896931,31.7204448694127,18.0947567350496,33.7769870325547,21.3646250176185,17.4690032650996,20.482002476921,23.6642566506744,11.4651456858846,20.7567079431635,4.9912074686924,38.7796785972314,45.7241340231923,40.3640219531484,43.8874329510252,42.1061765824673,48.1666311475929,41.7292945297351,34.3867108756817,40.7541222795531,52.9938204144961,38.6497814740516,41.5006536999439,66.4569426264168,47.3897307078836,41.620872460391,55.5040545985956,30.9832648120237,46.0450054420762,49.3194929601624,33.567456457115,31.0118408534217,56.9316039809879,44.609134763577,35.8028790447463,57.3941262324886,43.882004676759,46.8847225585964,75.7446112820604,52.1994406715849,55.4311801606062,65.3246529667532,50.0623601683393,38.2252366681005,56.9075532475367,55.6099230341223,49.6845948282189,15.4216359007718,25.5125159958052,15.0954224766031,20.8931253932481,23.127241497592,28.126977671989,15.6757009057687,21.4830011375017,24.4769966044609,12.3197371122926,14.1996038928154,13.3426388079533,15.3622880123943,16.8166314555125,14.9435634388166,9.91567309177293,20.0351288452426,19.9224539188307,17.6171156811282,14.1441094406335,10.5737062863221,21.2993253932984,8.95505888235262,34.8176293101485,23.5806457649499,17.6817289139578,27.7529582348526,11.0813570655421,8.99550830895993,5.84480185223734,29.6351815314562,10.6058126690941,10.8551608345974,20.3102897823762,33.9441997273039,22.8904451705386,23.843496167533,16.0283010315792,27.53129314483,17.6461010162852,10.4340922954988,10.4535523804977,31.9532346407137,13.7959377696692,19.2431369470273,18.2174178254042,19.751055688094,22.1368374311182,14.2567806667256,26.6517960767658,28.5410142874353,32.4819889036099,26.5190522289299,25.4549679045524,27.0153035921141,27.5463401657013,26.7925147183178,46.3233045996527,32.1936412657745,19.9465596475907,20.2405925335357,25.0668955317945,19.2645870217896,24.6538643585841,11.6792368872633,38.4756705857756,30.5986568498338,32.762375063536,45.7771868864506,9.4716774956061,12.2358866118862,44.7875403243463,46.4926398589043,38.9566824320275,32.4347249055265,21.1638116988647,24.8876525890809,29.6155986976391,14.6239881168041,16.6627440771645,32.7878606315926,17.618976320816,29.1625124456471,20.4815067206074,30.2347608228115,35.2208600059843,37.4887086296431,16.1131726843659,25.8492515944294,19.0368404887572,25.0010894635191,19.4434067491622,34.1124962045185,39.9662283274582,38.8509607667462,12.2653309972707,11.3911879148175,19.4193848566232,83.0216629847199,124.089684527464,6.97750483428055,25.8425414881566,21.6538174946431,42.7681654026697,47.0412058028055,27.3094654292735,33.6406560085384,14.9448594021587,15.5400555502811,40.1462235665699,29.5016371832617,26.1539044981534,23.3090438573194,40.9084906380799,12.4190358871912,24.9728061464256,17.6846264678779,21.2217126383558,26.0704586989158,26.0615440432692,24.0170879460845,42.6682217922727,24.0755261931065,40.090403096197,34.4520828611796,35.3591708868336,7.28129089550421,5.74894513452991,28.7854754861453,31.404748487863,49.3174125561846,26.7776348737311,22.6800968891275,32.7518968416381,16.220802191883,56.8665145133692,23.2777553812239,25.2198962379879,33.9102938575375,31.4310214177239,50.4975458489433,29.4064633003912,35.9493587673897,29.6208495690044,48.7197184291141,27.062670200836,20.2057571023515,50.0563525448426,31.5354067452514,23.0602405542263,28.7958671213312,30.0020732649918,36.9977928051815,24.3947412259191,23.0601796879384,22.4254309738171,27.6775016891039,18.9240638156721,21.533664185474,10.9514672630871,32.1620469096443,17.9575397758225,23.218396401599,31.7626971934618,19.1657016064547,15.1726221070292,17.1117831217272,17.647035637183,21.3521855210558,20.4052732435543,16.4494195955401,15.893938675153,15.3898862778556,15.5012645471176,5.60967095213783,8.6430542379594,2.94017422771084,35.4914097501126,41.2787431004603,40.7645035610169,4.41463099414651,15.0045895022599,21.2744084770172,29.8520776311462,12.3641928583382,23.0211346822635,29.720890895888,11.7290989911717,9.35941306751621,20.2063878835383,27.127714764168,36.6315126015764,18.3345388656564,17.1304639653346,22.8304982681518,14.223679163267,12.0188062693282,53.6753073270526,48.4388828838222,49.9400705290127,12.185398418281,28.5569617938061,28.6385696429621,34.3009141951909,30.225929605452,14.9519244874432,49.7589870274903,27.8233051481794,13.4763275101502,12.6825559006926,17.6739406796932,20.5733177506628,23.3012939590549,15.2382681373061,11.9750712215894,18.4061211938949,19.8226418176986,30.2976018588413,16.7075315674587,13.950722202665,22.8815451761364,16.158964469722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| |||
|short_description=p1@TRIP12 | |||
}} |
Revision as of 09:05, 21 January 2014
Short description: | p1@TRIP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIP12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000283943, ENST00000343290, ENST00000389044, ENST00000479037, ENST00000543084_5end |
EntrezGene: | TRIP12 |
HGNC: | 12306 |
UniProt: | Q14669F8W9P3Q14CA3B4DYJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.82e-16 | 61 |
myeloid leukocyte | 8.79e-16 | 72 |
monopoietic cell | 1.95e-15 | 59 |
monocyte | 1.95e-15 | 59 |
monoblast | 1.95e-15 | 59 |
promonocyte | 1.95e-15 | 59 |
myeloid lineage restricted progenitor cell | 9.69e-15 | 66 |
defensive cell | 6.23e-14 | 48 |
phagocyte | 6.23e-14 | 48 |
granulocyte monocyte progenitor cell | 1.51e-13 | 67 |
classical monocyte | 2.54e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.54e-12 | 42 |
myeloid cell | 7.92e-11 | 108 |
common myeloid progenitor | 7.92e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.05e-14 | 114 |
hematopoietic system | 1.67e-13 | 98 |
blood island | 1.67e-13 | 98 |
hemolymphoid system | 1.63e-12 | 108 |
skeletal system | 2.70e-10 | 100 |
skeletal element | 5.86e-10 | 90 |
bone marrow | 8.38e-10 | 76 |
immune system | 1.27e-09 | 93 |
bone element | 1.45e-09 | 82 |
musculoskeletal system | 7.59e-07 | 167 |