FFCP PHASE1:Hg19::chr20:10619777..10619811,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C542 | |||
|description=CAGE_peak_at_chr20:10619777..10619811,- | |||
|id=chr20:10619777..10619811,- | |||
|ontology_enrichment_celltype=CL:0000066!7.73e-15!254;CL:0002076!3.07e-12!43;CL:0000223!1.08e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.16e-13;42!CL:0002621;1.22e-12;3!CL:0002368;4.98e-11;13!CL:0002149;8.63e-07;6!CL:0002255;8.63e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.85e-15,42;CL:0002621,1.68e-12,3;CL:0002368,4.92e-11,13;CL:0000223,7.63e-11,58;CL:0002149,8.89e-07,6;CL:0002255,8.89e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;6.37e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!3.08e-11!143;DOID:305!7.48e-10!106;DOID:1749!1.60e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3111;6.32e-10;1!DOID:3603;6.32e-10;1!DOID:3001;8.63e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,5.30e-10,1;DOID:3603,5.30e-10,1;DOID:3001,8.89e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.22e-12;3!UBERON:0002426;6.32e-10;1!UBERON:0003831;6.32e-10;1!UBERON:0003898;6.32e-10;1!UBERON:0004830;6.32e-10;1!UBERON:0003830;6.32e-10;1!UBERON:0005175;6.32e-10;1!UBERON:0001774;6.32e-10;1!UBERON:0001103;6.32e-10;1!UBERON:0000486;4.59e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.68e-12,3;UBERON:0002426,4.06e-10,1;UBERON:0003831,4.06e-10,1;UBERON:0003898,4.06e-10,1;UBERON:0004830,4.06e-10,1;UBERON:0003830,4.06e-10,1;UBERON:0005175,4.06e-10,1;UBERON:0001774,4.06e-10,1;UBERON:0001103,4.06e-10,1;UBERON:0010084,4.06e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768482119587302,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.75374599577023,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.545492241181669,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0.184161977871793,0,0,0,0,0,0,1.46139224653261,0,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.4875642382488,3.2672311452068,0.382838137483752,2.4277867405332,0,0,0,0.616067160352178,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0.43050537267123,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,2.81974010175699,0.18714054040822,0,0.242721043499027,0,0.852408440419239,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0.933118762985422,0,0.537063524026827,0,0,0,0,0,0,0,0.520855522170466,0.262379999988587,0,0.455173793141999,1.27126825146383,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0.978323094660449,0,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0,0.664653872707185,0.330991955875499,0.627865836814451,0,3.41531455235751,1.38674673013139,0.173559738335131,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0.422401346077626,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0.573409195690071,0,0.0620964029413835,0.138348634936231,3.99937305478741,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,1.47918486351039,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,2.288292572803,0.690359926060101,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.992422356778588,0,1.02209942111676,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,1.22354542081276,0,0,1.12108865325516,0,0,0,0.0714765441766563,0,0.581207126840626,0.173858272302579,0,0.62164849248911,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0.782988022584546,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0.154348316215889,0,0,0,0.235676547101626,0,0,0,0.339854229375634,0,0,0,15.7127465972979,0.705789743431384,0.160482733378337,0,0,0,0.473314686579554,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0,0,0.407016343054873,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |||
|short_description=p@chr20:10619777..10619811,- | |||
}} |
Revision as of 10:17, 21 January 2014
Short description: | p@chr20:10619777..10619811, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:10619777..10619811, - |
Coexpression cluster: | C542_squamous_colon_pharyngeal_ductal_renal_gall_peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.85e-15 | 42 |
gingival epithelial cell | 1.68e-12 | 3 |
respiratory epithelial cell | 4.92e-11 | 13 |
endodermal cell | 7.63e-11 | 58 |
epithelial cell of uterus | 8.89e-07 | 6 |
stromal cell of endometrium | 8.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.68e-12 | 3 |
chest muscle | 4.06e-10 | 1 |
respiratory system muscle | 4.06e-10 | 1 |
skeletal muscle of trunk | 4.06e-10 | 1 |
respiratory system skeletal muscle | 4.06e-10 | 1 |
thoracic segment muscle | 4.06e-10 | 1 |
chest organ | 4.06e-10 | 1 |
muscle of trunk | 4.06e-10 | 1 |
diaphragm | 4.06e-10 | 1 |
future diaphragm | 4.06e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 5.30e-10 | 1 |
mucinous cystadenocarcinoma | 5.30e-10 | 1 |
female reproductive endometrioid cancer | 8.89e-07 | 6 |