FFCP PHASE1:Hg19::chr22:27622665..27622683,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=76bp_to_uc003adh.2_5end | |||
|coexpression_cluster_id=C2641 | |||
|description=CAGE_peak_3_at_uc003adh.2_5end | |||
|id=chr22:27622665..27622683,- | |||
|ontology_enrichment_celltype=CL:0000077!1.26e-20!19;CL:0002334!5.78e-13!12;CL:0000349!1.77e-11!3;CL:0002577!1.77e-11!3;CL:0002580!9.43e-11!3;CL:0002097!3.32e-08!2;CL:0000306!6.88e-08!4;CL:0002222!6.88e-08!4;CL:0002224!6.88e-08!4;CL:0002583!8.73e-08!2;CL:0000057!1.48e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000077;8.30e-27;19!CL:0002577;9.52e-20;3!CL:0002097;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.16e-26,19;CL:0002577,4.43e-20,3;CL:0000213,1.42e-08,58;CL:0000215,1.42e-08,58;CL:0002097,2.48e-08,2;CL:0000076,7.19e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.68e-15!14;DOID:120!5.73e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.12e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.14e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001987!1.06e-08!4;UBERON:0004340!1.06e-08!4;UBERON:0010077!6.88e-08!4;UBERON:0005389!6.88e-08!4;UBERON:0000484!6.88e-08!4;UBERON:0002546!6.88e-08!4;UBERON:0000965!6.88e-08!4;UBERON:0001803!6.88e-08!4;UBERON:0003073!6.88e-08!4;UBERON:0005426!6.88e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.54e-15;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.56e-15,4;UBERON:0004340,2.56e-15,4;UBERON:0003124,3.73e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,4.35766729300147,4.79870357673874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.81434175997808,0.496215615637554,0.153461973288062,0.561320188866147,0.384417447767103,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0.318593534327405,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0.751288044986092,1.52322084867518,0.813741466409323,0,1.61115835563733,0,0,0,0.343395705182793,0,0,0.57785949122191,1.28664954824955,0.782982875895635,0.680117776536817,0,0.489473409012935,8.41717553082991,0,1.09642024789354,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82387096184928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@uc003adh.2 | |||
}} |
Revision as of 15:05, 21 January 2014
Short description: | p3@uc003adh.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc003adh.2_5end |
Coexpression cluster: | C2641_mesothelioma_pagetoid_Mesothelial_Placental_mesenchymal_astrocytoma_lens |
Association with transcript: | 76bp_to_uc003adh.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.16e-26 | 19 |
placental epithelial cell | 4.43e-20 | 3 |
lining cell | 1.42e-08 | 58 |
barrier cell | 1.42e-08 | 58 |
cortical cell of adrenal gland | 2.48e-08 | 2 |
squamous epithelial cell | 7.19e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.14e-09 | 14 |