FFCP PHASE1:Hg19::chr22:50667406..50667412,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr22:50667406..50667412,+ | |||
|id=chr22:50667406..50667412,+ | |||
|ontology_enrichment_celltype=CL:0000764!1.48e-16!2;CL:0000765!1.48e-16!2;CL:0000050!1.48e-16!2;CL:0000038!1.48e-16!2;CL:0000558!1.48e-16!2;CL:0000547!1.48e-16!2;CL:0000549!1.48e-16!2;CL:0000550!1.48e-16!2;CL:0000552!1.48e-16!2;CL:0002588!1.02e-15!2;CL:0000342!1.89e-09!1;CL:0002565!1.89e-09!1;CL:0002274!4.29e-07!5;CL:0000457!4.29e-07!5;CL:0002191!4.29e-07!5;CL:0000097!4.29e-07!5;CL:0000831!4.29e-07!5;CL:0002028!4.29e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000342;2.39e-66;1!CL:0002565;2.39e-66;1!CL:0000306;8.69e-18;4!CL:0002222;8.69e-18;4!CL:0002224;8.69e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,4.66e-66,1;CL:0002565,4.66e-66,1;CL:0000306,7.35e-18,4;CL:0002222,7.35e-18,4;CL:0002224,7.35e-18,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.57e-14!9;UBERON:0002506!1.89e-09!1;UBERON:0001769!1.89e-09!1;UBERON:0002066!8.10e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;2.39e-66;1!UBERON:0001769;2.39e-66;1!UBERON:0007625;5.49e-25;11!UBERON:0001801;6.48e-20;14!UBERON:0010077;8.69e-18;4!UBERON:0005389;8.69e-18;4!UBERON:0000488;8.69e-18;4!UBERON:0000484;8.69e-18;4!UBERON:0000965;8.69e-18;4!UBERON:0001803;8.69e-18;4!UBERON:0000019;5.27e-15;19!UBERON:0000047;5.27e-15;19!UBERON:0004088;5.27e-15;19!UBERON:0010230;5.27e-15;19!UBERON:0000970;2.58e-14;20!UBERON:0002104;1.09e-13;21!UBERON:0001456;1.09e-13;21!UBERON:0000020;1.33e-12;23!UBERON:0002203;2.45e-12;6!UBERON:0001768;2.45e-12;6!UBERON:0002200;2.45e-12;6!UBERON:0001032;3.97e-12;24!UBERON:0004456;3.97e-12;24!UBERON:0010371;6.23e-10;31!UBERON:0006876;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,4.66e-66,1;UBERON:0001769,4.66e-66,1;UBERON:0007625,5.49e-25,11;UBERON:0001801,6.48e-20,14;UBERON:0010077,7.35e-18,4;UBERON:0005389,7.35e-18,4;UBERON:0000484,7.35e-18,4;UBERON:0002546,7.35e-18,4;UBERON:0000965,7.35e-18,4;UBERON:0001803,7.35e-18,4;UBERON:0003073,7.35e-18,4;UBERON:0005426,7.35e-18,4;UBERON:0000488,1.03e-17,4;UBERON:0000019,2.58e-14,20;UBERON:0000047,2.58e-14,20;UBERON:0010312,2.58e-14,20;UBERON:0004088,2.58e-14,20;UBERON:0010230,2.58e-14,20;UBERON:0003072,2.58e-14,20;UBERON:0004128,2.58e-14,20;UBERON:0003071,2.58e-14,20;UBERON:0000970,1.09e-13,21;UBERON:0002104,1.09e-13,21;UBERON:0001456,4.01e-13,22;UBERON:0002203,2.74e-12,6;UBERON:0001768,2.74e-12,6;UBERON:0002200,2.74e-12,6;UBERON:0000020,3.97e-12,24;UBERON:0001032,3.97e-12,24;UBERON:0004456,3.97e-12,24;UBERON:0005085,1.20e-09,31;UBERON:0000076,1.24e-09,8;UBERON:0006876,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0.653638332277218,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.50496973370552,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,1.14241563650639,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:50667406..50667412,+ | |||
}} |
Revision as of 16:46, 21 January 2014
Short description: | p@chr22:50667406..50667412, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr22:50667406..50667412, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 4.66e-66 | 1 |
iris pigment epithelial cell | 4.66e-66 | 1 |
crystallin accumulating cell | 7.35e-18 | 4 |
vertebrate lens cell | 7.35e-18 | 4 |
lens epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 4.66e-66 | 1 |
iris | 4.66e-66 | 1 |
pigment epithelium of eye | 5.49e-25 | 11 |
anterior segment of eyeball | 6.48e-20 | 14 |
cuboidal epithelium | 7.35e-18 | 4 |
transparent eye structure | 7.35e-18 | 4 |
simple cuboidal epithelium | 7.35e-18 | 4 |
cranial placode | 7.35e-18 | 4 |
lens of camera-type eye | 7.35e-18 | 4 |
epithelium of lens | 7.35e-18 | 4 |
lens placode | 7.35e-18 | 4 |
lens vesicle | 7.35e-18 | 4 |
atypical epithelium | 1.03e-17 | 4 |
camera-type eye | 2.58e-14 | 20 |
simple eye | 2.58e-14 | 20 |
immature eye | 2.58e-14 | 20 |
ocular region | 2.58e-14 | 20 |
eyeball of camera-type eye | 2.58e-14 | 20 |
optic cup | 2.58e-14 | 20 |
optic vesicle | 2.58e-14 | 20 |
eye primordium | 2.58e-14 | 20 |
eye | 1.09e-13 | 21 |
visual system | 1.09e-13 | 21 |
face | 4.01e-13 | 22 |
vasculature of eye | 2.74e-12 | 6 |
uvea | 2.74e-12 | 6 |
vasculature of head | 2.74e-12 | 6 |
sense organ | 3.97e-12 | 24 |
sensory system | 3.97e-12 | 24 |
entire sense organ system | 3.97e-12 | 24 |
ectodermal placode | 1.20e-09 | 31 |
external ectoderm | 1.24e-09 | 8 |
vasculature of organ | 2.63e-07 | 11 |