FFCP PHASE1:Hg19::chr3:38495435..38495478,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=174 | |||
|TSSclassifier=strong | |||
|UniProt=Q13705 | |||
|association_with_transcript=93bp_to_ENST00000352511_5end | |||
|coexpression_cluster_id=C4216 | |||
|description=CAGE_peak_2_at_ACVR2B_5end | |||
|id=chr3:38495435..38495478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.14e-08;7!CL:0000586;1.14e-08;7!CL:0002322;4.03e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.31e-08,7;CL:0000586,1.31e-08,7;CL:0002322,4.40e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.72e-08;10!UBERON:0005564;2.72e-08;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.11e-07!143;DOID:3095!1.51e-07!22;DOID:2994!1.51e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.09e-07;22!DOID:2994;1.09e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.05e-07,22;DOID:2994,1.05e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.77e-21!94;UBERON:0001016!4.77e-21!94;UBERON:0005743!3.94e-20!86;UBERON:0001017!1.91e-19!82;UBERON:0001049!5.51e-15!57;UBERON:0005068!5.51e-15!57;UBERON:0006241!5.51e-15!57;UBERON:0007135!5.51e-15!57;UBERON:0000955!8.16e-15!69;UBERON:0006238!8.16e-15!69;UBERON:0007023!8.44e-15!115;UBERON:0002616!4.70e-13!59;UBERON:0002346!7.10e-13!90;UBERON:0003075!1.21e-12!86;UBERON:0007284!1.21e-12!86;UBERON:0002780!1.72e-12!41;UBERON:0001890!1.72e-12!41;UBERON:0006240!1.72e-12!41;UBERON:0000924!7.89e-12!173;UBERON:0006601!7.89e-12!173;UBERON:0003080!1.11e-11!42;UBERON:0004121!1.61e-11!169;UBERON:0002020!7.04e-11!34;UBERON:0003528!7.04e-11!34;UBERON:0001893!7.20e-11!34;UBERON:0002791!1.48e-10!33;UBERON:0000153!3.27e-10!129;UBERON:0007811!3.27e-10!129;UBERON:0001869!5.23e-10!32;UBERON:0003056!5.48e-10!61;UBERON:0000033!1.16e-09!123;UBERON:0000956!4.44e-08!25;UBERON:0000203!4.44e-08!25;UBERON:0001950!1.17e-07!20;UBERON:0002619!2.65e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.15e-12;34!UBERON:0002791;8.46e-12;32!UBERON:0003528;1.26e-11;34!UBERON:0002020;1.26e-11;34!UBERON:0001869;1.40e-11;32!UBERON:0002780;3.04e-11;41!UBERON:0001890;3.04e-11;41!UBERON:0000956;8.29e-11;25!UBERON:0000203;8.29e-11;25!UBERON:0000073;1.37e-10;53!UBERON:0002616;1.37e-10;53!UBERON:0002619;1.62e-09;22!UBERON:0001950;1.66e-09;20!UBERON:0001017;5.60e-09;75!UBERON:0001016;1.15e-08;83!UBERON:0000922;2.16e-08;49!UBERON:0000955;1.45e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.92e-24,89;UBERON:0001017,4.66e-24,81;UBERON:0001049,8.60e-20,56;UBERON:0005068,8.60e-20,56;UBERON:0006241,8.60e-20,56;UBERON:0007135,8.60e-20,56;UBERON:0000073,2.82e-19,53;UBERON:0002616,2.82e-19,53;UBERON:0000955,7.31e-19,68;UBERON:0006238,7.31e-19,68;UBERON:0007023,4.04e-18,114;UBERON:0003075,1.17e-17,82;UBERON:0007284,1.17e-17,82;UBERON:0002346,4.34e-17,86;UBERON:0002780,6.62e-16,41;UBERON:0001890,6.62e-16,41;UBERON:0003080,6.62e-16,41;UBERON:0006240,6.62e-16,41;UBERON:0003528,8.72e-15,34;UBERON:0002020,8.72e-15,34;UBERON:0001893,9.02e-15,34;UBERON:0003056,1.87e-14,61;UBERON:0010371,5.12e-14,104;UBERON:0002791,1.54e-13,32;UBERON:0001869,1.89e-13,32;UBERON:0004121,1.84e-12,171;UBERON:0000924,1.84e-12,171;UBERON:0006601,1.84e-12,171;UBERON:0000956,3.62e-11,25;UBERON:0000203,3.62e-11,25;UBERON:0011216,7.70e-11,223;UBERON:0002619,5.89e-10,22;UBERON:0001950,6.69e-10,20;UBERON:0010314,1.97e-08,132 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0.655324116390517,0.527533956456907,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0,0.492484232307152,0.612002073732759,1.56727360739044,1.43117993565528,1.09499540058307,1.50651167513763,0.382067028739756,0.410502947249729,0.236132343941038,0,0,0.309632246632152,0,0.6024118375565,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0.447830948479849,0.32389366601898,0.77272670290256,0,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.425208599930087,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0,0,0,0.32592226663359,0,1.94826728407911,0.111410456885174,0.294605907474837,1.10766947291811,0.541607727530031,0.384273959177026,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0.535081656179426,2.09071047609954,0.566546713487831,0.383220493601921,0.68725489096526,1.01207876807801,0.95569624297229,0,1.90090408889675,0.451725357233318,0.255973222308837,1.24930726552346,0.236777252044017,0.821127996921047,0.403213486449465,0.802320587350522,0,0,0.670700859703636,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.661743720148475,0.221729397462564,1.14185221401064,2.42311289670768,0.364295288292542,0,0.324547393654683,0.174129737299267,0.26591592103773,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,1.10047216776027,0.417989933073621,0.258416759169329,0,0.33472061276467,0,1.52054421143703,0.976248230192678,0.367663080345869,0,0.357198913136319,0.898117490504679,0.225222960966644,3.06633274931766,0.949265659568129,0.732806975721629,1.31780417436063,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0,1.21085942115945,0,0,0.936480230490962,0,0,0.117434498643765,0.971237666208789,0.561803226808994,0,0.122834317311768,0.619954687054593,0,0.989067717114227,0,0,0.336672227908132,0.500474079487857,0,0.877955241761676,0,0.901428353439581,0.340296549480063,0.538168907066586,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0.302256294682921,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,17.9301348010505,19.2168164066154,14.1756610300812,13.6832592620289,17.1578178595427,12.4092302085782,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0,0.738155454624648,1.40241773803446,0,0,0,0,0,2.6487785964879,2.33678033231916,0.343135620597051,0,1.1240175325762,0.201057944823262,0.370353780634118,0,0,1.44331342025273,1.62302566965108,0.234817388471643,0.144366447761074,0,0.570762456703795,0.790204397959275,0.858486162094873,0.492434012174795,0,0.297262324577456,0,0.16798212819886,0.425325291727159,0.179117045405697,0,0.766765358330422,0,0.44024217006613,1.03664057770386,1.15295962733569,2.14612136824846,0.571481048629521,2.29193055334967,1.17217447210047,6.84289784090821,0.102827492703324,0.600686115687835,1.14330573052231,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0,0,1.02882949704857,2.83698264046557,1.0656887160644,0.428933980974443,0.542621605391443,0,0,1.06617584622764,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0.431255149719035,0.256686072559497,2.54094624222463,3.90419561572865,1.54657762555539,1.67516265334349,0.637938751653163,0,0,0,0.36807447515742,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0.117141414992713,0,2.27407504055985,0,0.664225598535437,0.184369168541703,0.173767228936166,0.587403472388222,1.37257369524342,0,0.215714200818617,0.213455115606889,0.606255142892519,3.32870879020994,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,2.77976734060731,0,0.368323955743585,0.114814448164607,0.182091168006717,0.262248829918848,2.25599806453706,0.847168708148562,1.56869953835371,0,0.949964660035881,2.27466768141793,0.850468526382578,0.863663664408557,0,0.812839312631559,0.501689773854853,0.509752546090077,1.66215201785745,2.46262230194396,0,0,1.28225062558195,0.328014645699706,1.30151357865721,1.03041011647722,0.457847324091717,0.495056999523528,0,0,0,0.676695028044854,0.924291702687866,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0.681813019328807,0,0.330569830721956,0.384380134730212,0.255225424989168,0.50578890427775,1.39453664789186,0,0,0.308033580176089,0,0,0,0.143124886741991,0.744316738719335,0,0.762520775695299,0,0,0.318203247925937,0,0.719489830333259,0,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0.405820753925408,0.92947049429925,0.281695602532241,0.286822704408103,0.196498082026242,0.7133421029625,0,0,0.329294892959902,0.379473173765715,1.04980416073495,0.192444225451024,0.670302275535787,0,0.753150406214233,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,2.7774258493143,0,0.490080431962063,2.41544127663434,0.865615277858669,3.20138295067864,0.797131363644112,0,0.383010740264733,0,1.29848776109822,0,0.228234679033192,0.47003968731907,0,0.846458889008016,0.321176150207399,0.403599414382095,1.70338495076131,0.343505344755765,0.614481528616916,0.671028323677248,0.500547425135725,0.19538809540204,1.67043704337145,1.23087398947712,0.540911356951966,1.33228787199128,0,0.18714054040822,1.31857361344705,0.36408156524854,0.445773537109913,1.70481688083848,0,0,0.307160702099232,0.994147647766298,2.11004124615769,1.55832187032068,1.15362711958732,1.90012867315194,0.19924798825107,1.38141957765574,0.251932747854276,3.27259784006895,0.492339221844278,0.311039587661807,0.269605053441981,0,0,1.57829449019094,2.3948309234694,1.11136990144637,1.93866549219044,2.59750674853184,1.99613798001194,0.520855522170466,0.262379999988587,0,0.1137934482855,1.27126825146383,0.236387681767936,1.37897349296586,1.16641845353302,3.47249989866585,1.77148277162768,0.723578631752448,1.52581736317083,3.42795705786796,1.18219047581419,2.19385397153973,0.980446171670911,0.139423744278603,2.38545801361771,0.683652335082007,5.07240589653732,7.18061155278177,5.97560545571044,1.5950057986596,0.549585560411174,3.19820865611181,0,0.784901281975124,0,2.25595660617181,1.56850027454192,2.3495022176618,1.3282761290693,0.635746315921515,0.210998064528027,0.489698424477443,2.40300221437699,1.51472047819464,0,0.884575645033392,1.22206028986725,0.889563386041866,0.741383633679017,0.626531697032732,2.69604531922708,1.60515529459758,0.937057782901357,0.182454789215666,0.782658475728359,0,1.57833761139756,2.41981432097328,8.26396456402323,0.568679216656392,1.35291077473043,1.65901106235595,1.32930774541437,1.323967823502,1.2557316736289,1.19472429772959,3.69992409838731,0.277349346026277,0.347119476670262,0.391969589657511,0.69647365264322,1.22308667769421,0.51595809741485,0.19351266257817,0.438535902517113,0.164230914106418,0.872901148395775,0.0882561266915003,0.90392296312213,0.685209623233754,0.993573058514948,1.26621591911757,0.391102765469606,0.400794101257669,1.49417096317547,0.799238438328521,1.29681375438695,0.458146384663663,5.66263492944483,0.576219191952599,0.49701014226173,1.88555227693436,0.271808412147228,0.104602846312333,0.101998217636322,0.866851769704557,1.80126086612937,1.64286454670392,1.27746588066972,0,0,1.95497680890578,1.3749625440701,0,1.59743200399193,0.858452096273142,1.56220020209311,2.5529719544956,0,15.144473438569,2.44227865152393,2.55489160981616,2.76354529802158,0.492137407573744,0.592713324460491,0,2.99647493445466,14.4677833618517,15.266877462293,9.13968743664207,0,0,2.00473536971481,0.670869375198532,0.788057072991982,2.46536564234491,1.37280437475228,0.717149357331379,0.575745591958336,3.57347663186684,0.662091970365432,0.25426853765475,0.542999601753713,0,0,0,2.38068310173083,0,0.79318464064088,0.146552233678082,0,1.68067843270016,2.38018683136842,0,0.704815022316672,0.640724475406168,0.628817220398664,2.89967338743037,0,0.197611631897944,0,2.55336503108073,1.08803560673895,0.2506898940227,0.919036730290385,1.31149052283922,0.628216385000937,0,1.09823638411767,1.752673029891,0,1.88579387612649,2.73224172942087,9.54605581059993,0.624902039810533,0.606596470166591,1.7127920012698,0.470531639396343,3.27834434064817,9.99955097414693,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0.465788870628778,0,0.53168342911599,0.521745061811734,0.150257608997218,0,0,0.727394636810238,0.107410557042488,0,0.796191777397232,1.20008329398946,0,0.336749488765919,0,0.192619830407303,0.857766365499703,0.782982875895635,0.226705925512272,0,0.489473409012935,0.358177682162975,0,0,0.353378291891762,0.38582807654183,0,0.512483037175893,0,0,1.38258436151731,0.194860308839388,0.398594520940089,0.163565394255844,1.31043939538565,0.983091635014877,0.211312123358627,0.19998739585493,1.38699248602383,0,0.567515953566836,0.552317850755522,0.279759015438889,1.24415452006595,12.7894371303652,1.50954735955355,0.786329709279482,9.17360960812917,3.56438312903453,0.425149840203366,0.619678821295011,0.558644917973244,0,3.62764027005765,0.80057074828547,0,1.2249819094128,1.22035527683273,1.41696576325585,1.91560630868582,2.46139637088906,7.81422258287326,1.52145955421279,2.09918339321406,9.99385941814081,0.588886311006154,1.41563668017288,0.366857197043358,1.27078232765372,0.381382095467167,1.3807198521202,1.79024599904647,1.0529445968896,0.20170506870352,0,8.1191075289241,1.14640342257068,1.33070477595341,1.48582686160468,0.781078098613847,1.86018116851066,1.8390584956233,6.56369770821863,1.09651553371436,2.48105589194647,0.351742488719241,0.383287282918786,0.535701835878287,1.3451348888753,1.21393120847326,1.36597314810779,2.12885688390333,0,0,1.69924332442079,1.38122824481983,0.354581522651905,0.333694205676207,1.17739639275771,1.41404030924402,0.840816489941367,0,0,0.9555033757741,1.92986669276972,7.7426669749036,2.90603563420313,5.21574816907738,0.801711364730253,0,0.6828739083758,0.691259661814092,0.860454717640555,0.236664001461131,0.426067023795788,0.846774100381858,0.4582137370881,0.31020638566432,0,3.13195209033819,0.98150233615243,0.365753774946808,3.23714418593947,4.31183788796237,4.6392577253528,1.45713297917742,2.33939463462106,2.18845852677505,0.713520544665411,1.1294608203896,4.83738273679888,2.71733118420012,0.463044948647668,1.74847648403166,0,1.96118657403124,0.471353094203252,0.785233868459781,1.18818560130834,3.8039015482506,0,0.375935671919414,0.515663103788617,0.0999411559249289,1.78553938605658,0,0.0802413666891683,0.730336388246517,1.83491713361816,1.72007499781742,0.157771562193185,1.42782129400921,8.29066311646717,1.0580536810308,0,0,0,10.8503125358168,8.52271461316825,12.7965486021551,11.7287154203279,8.28373956323238,7.62727666139213,12.2846694253264,2.5006970412019,2.41167717140561,1.65833887891756,2.99955687999496,1.70587185520785,1.42838658878244,1.48554492622814,1.36564371450887,0.672791175483681,1.2729431655633,0.808468755832877,0.435433495793923,0.342233301085281,0.0673520530145875,0.502055437748735,0.332660356546013,1.22104902916462,0.747091421144008,0,0.628776414746108,0,1.22241444182866,0.813792356631477,0.665756774185513,0.805095174364105,0.320568492303233 | |||
|short_description=p2@ACVR2B | |||
}} |
Revision as of 18:15, 21 January 2014
Short description: | p2@ACVR2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACVR2B_5end |
Coexpression cluster: | C4216_H9_hepatoblastoma_neuroblastoma_testicular_teratocarcinoma_iPS_HES3GFP |
Association with transcript: | 93bp_to_ENST00000352511_5end |
EntrezGene: | ACVR2B |
HGNC: | 174 |
UniProt: | Q13705 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.31e-08 | 7 |
germ cell | 1.31e-08 | 7 |
embryonic stem cell | 4.40e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.05e-07 | 22 |
germ cell cancer | 1.05e-07 | 22 |