FFCP PHASE1:Hg19::chr3:158390171..158390180,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13347 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=86bp_to_CU678961,EU831968,EU832061,HQ448342_5end | |||
|description=CAGE_peak_3_at_LXN_5end | |||
|id=chr3:158390171..158390180,- | |||
|ontology_enrichment_celltype=CL:0000222!7.22e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000746;7.59e-19;3!CL:0002622;9.93e-19;3!CL:0002564;1.19e-18;3!CL:0002379;4.72e-15;1!CL:0000511;7.13e-15;1!CL:0002625;7.13e-15;1!CL:0000216;7.13e-15;1!CL:0002591;1.15e-14;1!CL:0000737;2.18e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,6.63e-19,3;CL:0000513,6.63e-19,3;CL:0002564,1.04e-18,3;CL:0002622,1.04e-18,3;CL:0002379,4.73e-15,1;CL:0000511,7.13e-15,1;CL:0002625,7.13e-15,1;CL:0000216,7.13e-15,1;CL:0002591,1.23e-14,1;CL:0000737,1.97e-14,4 | |||
|ontology_enrichment_development_v019=CL:0000513;7.59e-19;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;4.72e-15;1!DOID:3565;4.72e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.73e-15,1;DOID:3565,4.73e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0004122!1.31e-08!15;UBERON:0002367!5.74e-08!11;UBERON:0010147!5.74e-08!11;UBERON:0009846!5.74e-08!11;UBERON:0003353!5.74e-08!11;UBERON:0004902!5.74e-08!11;UBERON:0003820!5.74e-08!11;UBERON:0009847!5.74e-08!11;UBERON:0000162!2.40e-07!14;UBERON:0001353!2.40e-07!14;UBERON:0000163!2.40e-07!14;UBERON:0006866!2.40e-07!14;UBERON:0000164!2.40e-07!14;UBERON:0000931!2.40e-07!14;UBERON:0003937!3.67e-07!12;UBERON:0005399!3.67e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;1.19e-18;3!UBERON:0001136;7.13e-15;1!UBERON:0001343;7.13e-15;1!UBERON:0004910;7.13e-15;1!UBERON:0004813;7.13e-15;1!UBERON:0011135;1.38e-11;5!UBERON:0002216;1.38e-11;5!UBERON:0011134;1.38e-11;5!UBERON:0002209;1.38e-11;5!UBERON:0002213;1.38e-11;5!UBERON:0007844;1.38e-11;5!UBERON:0011138;1.38e-11;5!UBERON:0001130;1.38e-11;5!UBERON:0001066;1.38e-11;5!UBERON:0001468;1.38e-11;5!UBERON:0004909;4.38e-08;2!UBERON:0000078;5.55e-08;2!UBERON:0002012;5.55e-08;2!UBERON:0008886;5.55e-08;2!UBERON:0004905;1.42e-07;8!UBERON:0000982;1.42e-07;8!UBERON:0004770;1.42e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,1.04e-18,3;UBERON:0003068,1.04e-18,3;UBERON:0002328,1.04e-18,3;UBERON:0004880,1.04e-18,3;UBERON:0001136,7.13e-15,1;UBERON:0001343,7.13e-15,1;UBERON:0004910,7.13e-15,1;UBERON:0005154,7.13e-15,1;UBERON:0005295,7.13e-15,1;UBERON:0004813,7.13e-15,1;UBERON:0005297,7.13e-15,1;UBERON:0005294,7.13e-15,1;UBERON:0010141,7.13e-15,1;UBERON:0005891,7.13e-15,1;UBERON:0011135,1.28e-11,5;UBERON:0002216,1.28e-11,5;UBERON:0011134,1.28e-11,5;UBERON:0002209,1.28e-11,5;UBERON:0002213,1.28e-11,5;UBERON:0005856,1.28e-11,5;UBERON:0005866,1.28e-11,5;UBERON:0005863,1.28e-11,5;UBERON:0007844,1.28e-11,5;UBERON:0011138,1.28e-11,5;UBERON:0001130,1.28e-11,5;UBERON:0001066,1.28e-11,5;UBERON:0001468,1.28e-11,5;UBERON:0004122,1.27e-08,15;UBERON:0004909,4.38e-08,2;UBERON:0000078,5.74e-08,2;UBERON:0007497,5.74e-08,2;UBERON:0003643,5.74e-08,2;UBERON:0003504,5.74e-08,2;UBERON:0003469,5.74e-08,2;UBERON:0003496,5.74e-08,2;UBERON:0002012,5.74e-08,2;UBERON:0008886,5.74e-08,2;UBERON:0007303,5.74e-08,2;UBERON:0002061,5.74e-08,2;UBERON:0005432,5.74e-08,2;UBERON:0004363,5.74e-08,2;UBERON:0004905,1.35e-07,8;UBERON:0000982,1.35e-07,8;UBERON:0004770,1.35e-07,8 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.866364470720326,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,0.255725123687061,0,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0,0.55146986366197,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.899756920638513,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,1.8403723757871,3.00102312635806,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.574072240823034,1.0925470080403,4.19598127870157,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0,0,0,0,0,3.21367859688319,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0.272999822815972,0.989838023675989,2.26016233240486,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11691131215246,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,2.66943366478961,0,0.453692771289717,0.621748802331122,0,0,0,0.155262956876259,0,0,0,0.901545653983311,1.52322084867518,0.406870733204662,0,0.537052785212442,0,0,0,0.343395705182793,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,1.01365464391844,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LXN | |||
}} |
Revision as of 22:18, 21 January 2014
Short description: | p3@LXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LXN_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_CU678961, EU831968, EU832061, HQ448342_5end |
EntrezGene: | LXN |
HGNC: | 13347 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 6.63e-19 | 3 |
cardiac muscle myoblast | 6.63e-19 | 3 |
nucleus pulposus cell of intervertebral disc | 1.04e-18 | 3 |
prostate stromal cell | 1.04e-18 | 3 |
meningothelial cell | 4.73e-15 | 1 |
androgen binding protein secreting cell | 7.13e-15 | 1 |
seminiferous tubule epithelial cell | 7.13e-15 | 1 |
Sertoli cell | 7.13e-15 | 1 |
smooth muscle cell of the pulmonary artery | 1.23e-14 | 1 |
striated muscle cell | 1.97e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.73e-15 | 1 |
meningioma | 4.73e-15 | 1 |