FFCP PHASE1:Hg19::chr4:87928166..87928186,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |||
|TSSclassifier=strong | |||
|UniProt=P51825 | |||
|association_with_transcript=13bp_to_NM_005935,uc003hqj.3,uc003hqk.3,uc011cda.1_5end | |||
|description=CAGE_peak_12_at_AFF1_5end | |||
|id=chr4:87928166..87928186,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.46e-32!172;CL:0000566!1.46e-32!172;CL:0002032!3.70e-31!165;CL:0000837!3.70e-31!165;CL:0000988!1.10e-29!182;CL:0000738!2.72e-22!140;CL:0000763!5.13e-20!112;CL:0000049!5.13e-20!112;CL:0002031!6.87e-20!124;CL:0002087!7.28e-18!119;CL:0000766!1.03e-11!76;CL:0000839!1.20e-10!70;CL:0000542!2.39e-10!53;CL:0000051!2.39e-10!53;CL:0000838!5.29e-10!52;CL:0000557!6.21e-10!71;CL:0000236!1.12e-08!14;CL:0000945!2.92e-08!24;CL:0000826!2.92e-08!24;CL:0002194!7.42e-08!63;CL:0000576!7.42e-08!63;CL:0000040!7.42e-08!63;CL:0000559!7.42e-08!63;CL:0002009!1.13e-07!65;CL:0002057!1.81e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-15;33!CL:0002057;2.63e-15;33!CL:0000236;1.03e-11;13!CL:0000473;9.30e-11;39!CL:0000234;9.30e-11;39!CL:0000763;5.45e-10;100!CL:0000945;7.39e-09;24!CL:0000576;3.23e-08;48!CL:0002087;2.65e-07;104!CL:0000738;4.00e-07;136!CL:0000988;6.55e-07;177!CL:0000766;7.83e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.38e-39,168;CL:0002032,5.02e-38,161;CL:0000837,5.02e-38,161;CL:0000988,3.98e-36,177;CL:0000763,4.78e-28,108;CL:0000049,4.78e-28,108;CL:0000738,3.93e-26,136;CL:0002031,6.05e-25,120;CL:0002087,2.87e-21,115;CL:0000766,1.71e-17,72;CL:0000839,1.36e-16,66;CL:0000557,7.66e-16,67;CL:0002009,3.12e-12,61;CL:0000236,3.39e-12,14;CL:0002194,3.50e-12,59;CL:0000576,3.50e-12,59;CL:0000040,3.50e-12,59;CL:0000559,3.50e-12,59;CL:0000860,1.11e-10,42;CL:0002057,1.11e-10,42;CL:0000473,1.09e-09,48;CL:0000234,1.09e-09,48;CL:0000542,3.17e-09,53;CL:0000051,3.17e-09,53;CL:0000945,5.11e-09,24;CL:0000826,5.11e-09,24;CL:0000838,8.67e-09,52;CL:0000134,2.04e-07,354;CL:0002320,5.49e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;1.02e-08;108!CL:0002057;2.45e-08;42 | |||
|ontology_enrichment_disease=DOID:1240!2.34e-11!39;DOID:8692!8.73e-10!31;DOID:2531!2.48e-09!51;DOID:0060083!2.48e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.97e-12;31!DOID:1240;1.02e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.18e-13,39;DOID:8692,2.49e-12,31;DOID:2531,1.56e-09,51;DOID:0060083,1.56e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.38e-12!112;UBERON:0002390!4.33e-11!102;UBERON:0003061!4.33e-11!102;UBERON:0007023!1.73e-08!115;UBERON:0002405!2.64e-08!115;UBERON:0002371!1.01e-07!80;UBERON:0001474!3.33e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.76e-17,98;UBERON:0003061,8.76e-17,98;UBERON:0002193,3.23e-16,108;UBERON:0002405,1.21e-13,93;UBERON:0002371,8.65e-13,76;UBERON:0001474,2.21e-11,82;UBERON:0004765,4.17e-09,90;UBERON:0003081,4.63e-07,203;UBERON:0001434,6.80e-07,100;UBERON:0002384,7.44e-07,371 | |||
|phase1_expression=0,1.49870366723688,0.704772020479856,0,0.893922188854576,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,1.34465029290355,0,0,0,0.61560529038394,0.204000691244253,0,0.286235987131057,0,0.376627918784408,2.21598876669059,1.47781061009902,1.25937250101887,0.393364276848904,0.767658796194425,1.08371286321253,0.919421224478927,0.30120591877825,0,0.232401601740905,0.710846162437108,1.17440175733939,0.553995408531877,0.802177789880567,0.434021741431704,0.447830948479849,0.32389366601898,2.06060454107349,1.30858414901608,1.13362783106643,1.21292030593908,1.62700325833979,3.28934310417461,2.47765096716083,2.3015391385772,3.58624989140741,4.02019790810595,1.37898272294647,1.29096936716765,4.06279459783025,1.69418105588344,4.09359225086769,2.47195832889593,1.22433556948361,2.56743221660875,1.91801137739712,3.62836430205388,3.59034583718937,4.68847225585964,0.580418477257168,3.97169657283798,3.11411124497787,3.76872997885115,4.69334626578181,3.25783267057675,3.63239701580021,1.10483290796269,2.53169909952708,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0,0.365328307529268,1.75996244461323,2.18455444504853,2.66852776159066,4.26730222566507,2.80277190925209,5.17277195959035,3.96626923670917,2.86216126360609,7.96898156753228,7.04684627245127,6.49864487812889,6.60856642895129,3.92355994087075,5.00429761072646,1.37696839079683,1.57204305099666,2.05601498999509,0.83593247695339,0.32592226663359,0,0,0.445641827540694,0.589211814949674,0.886135578334485,0,0.640456598628376,0.780356085359269,1.47994114143309,1.10540007114339,1.15921234294021,0.741432815810302,1.07016331235885,1.04535523804977,1.0197840842781,0.383220493601921,0.68725489096526,0.759059076058509,0.95569624297229,1.30216690771284,0.950452044448374,0.301150238155546,1.02389288923535,2.49861453104692,0.236777252044017,0,2.01606743224732,1.87208137048455,1.44824403882799,0,0,0.383587685530591,0.361439152384566,0,0,0,0,0.472674085820339,0.221729397462564,0.263504357079378,1.76821751921912,0.728590576585084,0,2.92092654289215,2.43781632218974,1.59549552622638,1.66943437013739,2.28797964312051,1.11437250398869,0.596287222100115,0,1.04142150482278,3.39184765154406,0.838998872419812,0.825354125820202,1.25396979922086,0.516833518338658,3.20189636418039,0.66944122552934,0,0,0.24406205754817,0.735326160691737,0,1.07159673940896,1.12264686313085,1.23872628531654,0,0,0.549605231791222,1.31780417436063,3.87780264148325,0,0,0.25326102332916,1.05927344650575,1.14734648299525,0,0,2.1349799145941,0,2.48968828319813,0.67355336034844,0.817309515567294,1.96764655938411,0.576175924479999,0,0,0.570471821544449,0,0.117434498643765,0,0.421352420106746,0.61246251376468,0,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0.554128230968366,0.438977620880838,0,0.751190294532984,0.340296549480063,0.717558542755448,0,0.423863802319124,0.600182192168805,0.309157587715317,1.28820270022815,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.818238361772504,0,0.487894824518382,0.132529768321485,0.813357600086629,0.518305275076852,0.504641701751257,0,0,1.92972281457866,0,0,0,0.236613600079688,0.505754070234305,1.20505514941741,0.441175890929576,0.217879444092406,0.474541238222193,0.269662616320329,0.98110732562673,0.769494313892781,4.42893272774789,0,2.057870056657,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.614942192715568,0.343135620597051,0.109750285408626,0,0.301586917234893,0,0,0,0,0.115930404975077,0.70445216541493,1.44366447761074,0.925971025153221,1.14152491340759,0,0,0.492434012174795,0.468008530278475,1.18904929830983,0,0.16798212819886,0.425325291727159,0.447792613514241,0.290633938513962,0,28.5744677979647,2.46535615237033,1.86595303986695,1.8735593944205,3.02981840223312,1.0159663086747,1.52795370223311,0,0,0.616964956219941,1.20137223137567,0.857479297891735,0.224262168690721,0.87192013766656,0.51336800074665,0.129271715757778,0,1.690605505112,0.531876233169741,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,1.74306691720059,0.599837947092342,0,0.502257091432126,2.10833939483032,0,0,0,0.289562613335158,0,1.07436577943937,1.2329365839288,1.18218456121156,0.862510299438069,1.41177339907723,0.508189248444927,0,0,0.335032530668698,0,4.49404214368309,5.9832291840805,3.31532410748828,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0.788512075169673,0.117141414992713,0,0,0,0,0.184369168541703,0.521301686808497,0,1.37257369524342,1.44737618286021,0.647142602455851,1.49418580924822,0,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0,0,0,1.48418066444991,0.462629081407967,0.355123450626254,0.410635780069046,0.519254429183621,0.348631135379878,0.483437798366489,0.40101294060657,0.184161977871793,0.34444334449382,0.182091168006717,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.105551628892876,1.13733384070897,1.70093705276516,0.64774774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| |||
|short_description=p12@AFF1 | |||
}} |
Revision as of 02:06, 22 January 2014
Short description: | p12@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AFF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_005935, uc003hqj.3, uc003hqk.3, uc011cda.1_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | P51825 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.38e-39 | 168 |
hematopoietic oligopotent progenitor cell | 5.02e-38 | 161 |
hematopoietic multipotent progenitor cell | 5.02e-38 | 161 |
hematopoietic cell | 3.98e-36 | 177 |
myeloid cell | 4.78e-28 | 108 |
common myeloid progenitor | 4.78e-28 | 108 |
leukocyte | 3.93e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 6.05e-25 | 120 |
nongranular leukocyte | 2.87e-21 | 115 |
myeloid leukocyte | 1.71e-17 | 72 |
myeloid lineage restricted progenitor cell | 1.36e-16 | 66 |
granulocyte monocyte progenitor cell | 7.66e-16 | 67 |
macrophage dendritic cell progenitor | 3.12e-12 | 61 |
B cell | 3.39e-12 | 14 |
monopoietic cell | 3.50e-12 | 59 |
monocyte | 3.50e-12 | 59 |
monoblast | 3.50e-12 | 59 |
promonocyte | 3.50e-12 | 59 |
classical monocyte | 1.11e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-10 | 42 |
defensive cell | 1.09e-09 | 48 |
phagocyte | 1.09e-09 | 48 |
lymphocyte | 3.17e-09 | 53 |
common lymphoid progenitor | 3.17e-09 | 53 |
lymphocyte of B lineage | 5.11e-09 | 24 |
pro-B cell | 5.11e-09 | 24 |
lymphoid lineage restricted progenitor cell | 8.67e-09 | 52 |
mesenchymal cell | 2.04e-07 | 354 |
connective tissue cell | 5.49e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.76e-17 | 98 |
blood island | 8.76e-17 | 98 |
hemolymphoid system | 3.23e-16 | 108 |
immune system | 1.21e-13 | 93 |
bone marrow | 8.65e-13 | 76 |
bone element | 2.21e-11 | 82 |
skeletal element | 4.17e-09 | 90 |
lateral plate mesoderm | 4.63e-07 | 203 |
skeletal system | 6.80e-07 | 100 |
connective tissue | 7.44e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.18e-13 | 39 |
myeloid leukemia | 2.49e-12 | 31 |
hematologic cancer | 1.56e-09 | 51 |
immune system cancer | 1.56e-09 | 51 |