FFCP PHASE1:Hg19::chr4:151503383..151503398,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6758 | |||
|TSSclassifier=weak | |||
|UniProt=Q9Y586 | |||
|association_with_transcript=306bp_to_ENST00000317605,NM_006439,uc003ilw.2_5end | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_3_at_MAB21L2_5end | |||
|id=chr4:151503383..151503398,+ | |||
|ontology_enrichment_celltype=CL:0000062!4.61e-12!11;CL:0000375!4.61e-12!11;CL:0000335!4.61e-12!11;CL:0002540!4.84e-09!6;CL:0002586!6.83e-08!3;CL:0002504!1.76e-07!3;CL:1000279!1.76e-07!3;CL:1000280!1.76e-07!3;CL:0002092!4.07e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000062;8.59e-21;9!CL:0002586;5.00e-13;3!CL:0002504;2.97e-12;3!CL:1000279;2.97e-12;3!CL:1000280;2.97e-12;3!CL:0000149;7.07e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,6.25e-17,11;CL:0000375,6.25e-17,11;CL:0000335,6.25e-17,11;CL:0002586,5.90e-13,3;CL:0002504,3.22e-12,3;CL:1000279,3.22e-12,3;CL:1000280,3.22e-12,3;CL:0000149,7.99e-10,4 | |||
|ontology_enrichment_development_v019=CL:0000335;7.84e-17;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!2.48e-12!11;UBERON:0001155!9.20e-12!9;UBERON:0007625!2.33e-11!11;UBERON:0003076!2.35e-09!15;UBERON:0003057!2.35e-09!15;UBERON:0000160!3.62e-09!27;UBERON:0000970!5.91e-09!20;UBERON:0002298!1.36e-08!8;UBERON:0001456!1.78e-08!21;UBERON:0002104!2.01e-08!21;UBERON:0001781!6.83e-08!3;UBERON:0001782!6.83e-08!3;UBERON:0005424!6.83e-08!3;UBERON:0000966!7.27e-08!5;UBERON:0005388!7.27e-08!5;UBERON:0001802!7.27e-08!5;UBERON:0001444!1.26e-07!48;UBERON:0000019!1.36e-07!19;UBERON:0000047!1.36e-07!19;UBERON:0004088!1.36e-07!19;UBERON:0003072!1.36e-07!19;UBERON:0003071!1.36e-07!19;UBERON:0004128!1.36e-07!19;UBERON:0000020!1.68e-07!23;UBERON:0001032!4.25e-07!24;UBERON:0004456!4.25e-07!24;UBERON:0000988!7.40e-07!3;UBERON:0002240!8.72e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.28e-29;17!UBERON:0005409;2.81e-22;22!UBERON:0000059;7.46e-22;11!UBERON:0001155;1.39e-20;9!UBERON:0004921;1.32e-13;33!UBERON:0000966;4.06e-13;5!UBERON:0005388;4.06e-13;5!UBERON:0001802;4.06e-13;5!UBERON:0001781;5.00e-13;3!UBERON:0001782;5.00e-13;3!UBERON:0007625;8.32e-09;11!UBERON:0000970;1.01e-08;20!UBERON:0001456;2.40e-08;21!UBERON:0002104;2.94e-08;21!UBERON:0001555;3.45e-08;54!UBERON:0002108;1.29e-07;4!UBERON:0000020;1.87e-07;23!UBERON:0001474;2.85e-07;18!UBERON:0001032;4.19e-07;24!UBERON:0004456;4.19e-07;24!UBERON:0001434;6.56e-07;36!UBERON:0000019;7.54e-07;19!UBERON:0000047;7.54e-07;19!UBERON:0004088;7.54e-07;19!UBERON:0010230;7.54e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.82e-29,17;UBERON:0000059,8.29e-22,11;UBERON:0001155,1.55e-20,9;UBERON:0005409,2.35e-19,25;UBERON:0001782,5.90e-13,3;UBERON:0005424,5.90e-13,3;UBERON:0000966,4.90e-11,6;UBERON:0005388,4.90e-11,6;UBERON:0001802,4.90e-11,6;UBERON:0001781,7.99e-10,4;UBERON:0007625,8.93e-09,11;UBERON:0000970,2.54e-08,21;UBERON:0002104,2.54e-08,21;UBERON:0001456,5.75e-08,22;UBERON:0002108,1.36e-07,4;UBERON:0001444,1.63e-07,49;UBERON:0000020,3.70e-07,24;UBERON:0001032,3.70e-07,24;UBERON:0004456,3.70e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.01392563272577,1.5905718941022,0,1.32348744029695,0.443458794925128,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0.816616685019573,1.84251475967652,0.619954687054593,0,0,4.55080680969013,0.718618141816238,2.18836948140286,1.87677779807946,1.6623846929051,0,0,0,0,0,0,0,0,0,1.03056216018252,0.744467425326359,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0,0.829288440122964,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,1.52631302506568,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,2.31486636835928,0,2.66422179016099,0,1.08524321078289,2.46972101034231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80567659836631,2.27407504055985,2.0694614258501,7.3064815838898,4.24049087645917,0,0.783204629850962,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0,0,0,2.3080511260475,3.60816110269676,3.25378394664303,0.103041011647722,1.92295876118521,1.32015199872941,0,0,0,0.96670718292122,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77732160924961,1.64722217841633,1.06031162111118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43411352204052,0.491245205065606,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,2.0345239835768,2.4441205797345,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81560890920526,0,0,0,0,0,2.48578814858586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08270229666224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,1.10929051536852,0.745156835296601,65.7156015947096,0,0,0,0,0,0,0,0,0,0.568209015825267,0.754703705257725,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09261988171685,0.970423302570136,0,5.35127227140868,0,0,0,0,0,0,0,5.99549104274163,4.2874366829448,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,1.01954599465248,0.0657727735628491,0,0,0,0,0,3.65263488203798,0,0,1.92986669276972,0,0,0,0,0,0,0,0,0,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15761237161917,5.02686989159102,0,0,0,0.785233868459781,0.891139200981258,0.8453114551668,0.509781344063451,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,1.5870805215462,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MAB21L2 | |||
}} |
Revision as of 03:26, 22 January 2014
Short description: | p3@MAB21L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAB21L2_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 306bp_to_ENST00000317605, NM_006439, uc003ilw.2_5end |
EntrezGene: | MAB21L2 |
HGNC: | 6758 |
UniProt: | Q9Y586 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 6.25e-17 | 11 |
osteoprogenitor cell | 6.25e-17 | 11 |
mesenchyme condensation cell | 6.25e-17 | 11 |
retinal pigment epithelial cell | 5.90e-13 | 3 |
enteric smooth muscle cell | 3.22e-12 | 3 |
smooth muscle cell of large intestine | 3.22e-12 | 3 |
smooth muscle cell of colon | 3.22e-12 | 3 |
visual pigment cell | 7.99e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.82e-29 | 17 |
large intestine | 8.29e-22 | 11 |
colon | 1.55e-20 | 9 |
gastrointestinal system | 2.35e-19 | 25 |
pigmented layer of retina | 5.90e-13 | 3 |
presumptive retinal pigmented epithelium | 5.90e-13 | 3 |
retina | 4.90e-11 | 6 |
photoreceptor array | 4.90e-11 | 6 |
posterior segment of eyeball | 4.90e-11 | 6 |
layer of retina | 7.99e-10 | 4 |
pigment epithelium of eye | 8.93e-09 | 11 |
eye | 2.54e-08 | 21 |
visual system | 2.54e-08 | 21 |
face | 5.75e-08 | 22 |
small intestine | 1.36e-07 | 4 |
subdivision of head | 1.63e-07 | 49 |
sense organ | 3.70e-07 | 24 |
sensory system | 3.70e-07 | 24 |
entire sense organ system | 3.70e-07 | 24 |