FFCP PHASE1:Hg19::chr5:137610161..137610174,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4245 | |||
|TSSclassifier=strong | |||
|UniProt=O60609 | |||
|association_with_transcript=78bp_to_NM_001496,uc003lcn.2,uc003lco.2_5end | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_3_at_GFRA3_5end | |||
|id=chr5:137610161..137610174,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.56e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;7.88e-13;1!DOID:1357;7.88e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,7.89e-13,1;DOID:1357,7.89e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.27e-17!115;UBERON:0003135!2.35e-12!11;UBERON:0003101!2.52e-08!22;UBERON:0000079!2.52e-08!22;UBERON:0006947!7.21e-08!3;UBERON:0004054!7.21e-08!3;UBERON:0000473!5.14e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.80e-17;49!UBERON:0001764;7.88e-13;1!UBERON:0001825;7.88e-13;1!UBERON:0002426;9.92e-13;1!UBERON:0003831;9.92e-13;1!UBERON:0003898;9.92e-13;1!UBERON:0004830;9.92e-13;1!UBERON:0003830;9.92e-13;1!UBERON:0005175;9.92e-13;1!UBERON:0001774;9.92e-13;1!UBERON:0001103;9.92e-13;1!UBERON:0007029;1.40e-12;1!UBERON:0005795;3.08e-12;1!UBERON:0006955;4.55e-07;2!UBERON:0004801;4.55e-07;2!UBERON:0005090;5.41e-07;2!UBERON:0001630;5.41e-07;2!UBERON:0003127;9.53e-07;2!UBERON:0000341;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,7.89e-13,1;UBERON:0001825,7.89e-13,1;UBERON:0002426,9.92e-13,1;UBERON:0003831,9.92e-13,1;UBERON:0003898,9.92e-13,1;UBERON:0004830,9.92e-13,1;UBERON:0003830,9.92e-13,1;UBERON:0005175,9.92e-13,1;UBERON:0001774,9.92e-13,1;UBERON:0001103,9.92e-13,1;UBERON:0010084,9.92e-13,1;UBERON:0007029,1.25e-12,1;UBERON:0006955,4.56e-07,2;UBERON:0004801,4.56e-07,2;UBERON:0005090,5.41e-07,2;UBERON:0001630,5.41e-07,2;UBERON:0003127,7.61e-07,2;UBERON:0000341,8.06e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,58.448397502192,0.102268682502155,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,0,0.442317039724898,1.18219047581419,0,0,0,0.307801034015188,0,0,0.0897576444097721,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,4.81546588379273,0,0,0,0,0.394584402849391,4.83962864194656,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.599037001496973,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00975890876195,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.943595651135378,3.38549878395243,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.156986185701028,0,0,3.65263488203798,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,4.6392577253528,3.88568794447312,0,0.198950775161368,0.118920090777569,0.22589216407792,0,0,0.0771741581079447,0.655678681511872,1.41095188908457,0.980593287015622,0,0,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0.227336094654718,0.267964130156178,0,0,0.213233981900981,1.90451545170992,0,0.186224142887574,0,0,0.404234377916439,0,1.71116650542641,0,0.143444410785353,1.99596213927608,0,0.106727345877715,0,0,0,0.244482888365733,1.22068853494722,0.665756774185513,0,0 | |||
|short_description=p3@GFRA3 | |||
}} |
Revision as of 07:40, 22 January 2014
Short description: | p3@GFRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GFRA3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 78bp_to_NM_001496, uc003lcn.2, uc003lco.2_5end |
EntrezGene: | GFRA3 |
HGNC: | 4245 |
UniProt: | O60609 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 7.89e-13 | 1 |
paranasal sinus | 7.89e-13 | 1 |
chest muscle | 9.92e-13 | 1 |
respiratory system muscle | 9.92e-13 | 1 |
skeletal muscle of trunk | 9.92e-13 | 1 |
respiratory system skeletal muscle | 9.92e-13 | 1 |
thoracic segment muscle | 9.92e-13 | 1 |
chest organ | 9.92e-13 | 1 |
muscle of trunk | 9.92e-13 | 1 |
diaphragm | 9.92e-13 | 1 |
future diaphragm | 9.92e-13 | 1 |
surface | 1.25e-12 | 1 |
uterine epithelium | 4.56e-07 | 2 |
cervix epithelium | 4.56e-07 | 2 |
muscle structure | 5.41e-07 | 2 |
muscle organ | 5.41e-07 | 2 |
open tracheal system trachea | 7.61e-07 | 2 |
throat | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.89e-13 | 1 |
maxillary sinus cancer | 7.89e-13 | 1 |