FFCP PHASE1:Hg19::chr6:35227480..35227546,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13149 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDR8,Q5R3B9,P36508 | |||
|association_with_transcript=0bp_to_ENST00000417184,ENST00000440666,NM_003427,uc003oki.1,uc003okj.1_5end | |||
|description=CAGE_peak_1_at_ZNF76_5end | |||
|id=chr6:35227480..35227546,+ | |||
|ontology_enrichment_celltype=CL:0000333!7.39e-12!41;CL:0000133!4.79e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.37e-12,41;CL:0000133,5.01e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.23e-14!347;UBERON:0000475!6.43e-13!365;UBERON:0000924!3.86e-12!173;UBERON:0006601!3.86e-12!173;UBERON:0004121!7.29e-12!169;UBERON:0000073!3.07e-11!94;UBERON:0001016!3.07e-11!94;UBERON:0000477!4.22e-11!286;UBERON:0002346!6.41e-11!90;UBERON:0003075!1.02e-10!86;UBERON:0007284!1.02e-10!86;UBERON:0000483!1.41e-10!309;UBERON:0000119!1.45e-10!312;UBERON:0000033!1.79e-10!123;UBERON:0000955!1.94e-10!69;UBERON:0006238!1.94e-10!69;UBERON:0000153!4.15e-10!129;UBERON:0007811!4.15e-10!129;UBERON:0001049!9.57e-10!57;UBERON:0005068!9.57e-10!57;UBERON:0006241!9.57e-10!57;UBERON:0007135!9.57e-10!57;UBERON:0000468!1.18e-09!659;UBERON:0005743!4.34e-09!86;UBERON:0002616!5.98e-09!59;UBERON:0001048!1.07e-08!168;UBERON:0003056!1.36e-08!61;UBERON:0001017!1.38e-08!82;UBERON:0007023!1.57e-08!115;UBERON:0000025!1.80e-08!194;UBERON:0004111!2.34e-08!241;UBERON:0000063!3.08e-08!97;UBERON:0000922!5.89e-08!612;UBERON:0000467!8.36e-08!625;UBERON:0000064!8.74e-08!219;UBERON:0000062!9.20e-08!511;UBERON:0000480!1.22e-07!626;UBERON:0002780!3.03e-07!41;UBERON:0001890!3.03e-07!41;UBERON:0006240!3.03e-07!41;UBERON:0000923!3.61e-07!604;UBERON:0005291!3.61e-07!604;UBERON:0006598!3.61e-07!604;UBERON:0002532!3.61e-07!604;UBERON:0002050!4.05e-07!605;UBERON:0005423!4.05e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.02e-07;53!UBERON:0002616;6.02e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.10e-13,171;UBERON:0000924,2.10e-13,171;UBERON:0006601,2.10e-13,171;UBERON:0002346,1.85e-12,86;UBERON:0011216,2.04e-12,223;UBERON:0003075,2.79e-12,82;UBERON:0007284,2.79e-12,82;UBERON:0000483,1.51e-11,306;UBERON:0010371,1.52e-11,104;UBERON:0000119,1.56e-11,309;UBERON:0001016,2.73e-11,89;UBERON:0010314,3.15e-11,132;UBERON:0000955,4.23e-11,68;UBERON:0006238,4.23e-11,68;UBERON:0000073,1.84e-10,53;UBERON:0002616,1.84e-10,53;UBERON:0001049,1.85e-10,56;UBERON:0005068,1.85e-10,56;UBERON:0006241,1.85e-10,56;UBERON:0007135,1.85e-10,56;UBERON:0003056,1.65e-09,61;UBERON:0001048,3.03e-09,160;UBERON:0001017,4.11e-09,81;UBERON:0000025,1.19e-08,192;UBERON:0007023,2.02e-08,114;UBERON:0004111,2.04e-08,240;UBERON:0002780,3.22e-07,41;UBERON:0001890,3.22e-07,41;UBERON:0003080,3.22e-07,41;UBERON:0006240,3.22e-07,41 | |||
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| |||
|short_description=p1@ZNF76 | |||
}} |
Revision as of 11:33, 22 January 2014
Short description: | p1@ZNF76 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF76_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417184, ENST00000440666, NM_003427, uc003oki.1, uc003okj.1_5end |
EntrezGene: | ZNF76 |
HGNC: | 13149 |
UniProt: | E9PDR8Q5R3B9P36508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.37e-12 | 41 |
neurectodermal cell | 5.01e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.10e-13 | 171 |
ectoderm | 2.10e-13 | 171 |
presumptive ectoderm | 2.10e-13 | 171 |
neurectoderm | 1.85e-12 | 86 |
organ system subdivision | 2.04e-12 | 223 |
neural plate | 2.79e-12 | 82 |
presumptive neural plate | 2.79e-12 | 82 |
epithelium | 1.51e-11 | 306 |
ecto-epithelium | 1.52e-11 | 104 |
cell layer | 1.56e-11 | 309 |
nervous system | 2.73e-11 | 89 |
structure with developmental contribution from neural crest | 3.15e-11 | 132 |
brain | 4.23e-11 | 68 |
future brain | 4.23e-11 | 68 |
regional part of nervous system | 1.84e-10 | 53 |
regional part of brain | 1.84e-10 | 53 |
neural tube | 1.85e-10 | 56 |
neural rod | 1.85e-10 | 56 |
future spinal cord | 1.85e-10 | 56 |
neural keel | 1.85e-10 | 56 |
pre-chordal neural plate | 1.65e-09 | 61 |
primordium | 3.03e-09 | 160 |
central nervous system | 4.11e-09 | 81 |
tube | 1.19e-08 | 192 |
adult organism | 2.02e-08 | 114 |
anatomical conduit | 2.04e-08 | 240 |
regional part of forebrain | 3.22e-07 | 41 |
forebrain | 3.22e-07 | 41 |
anterior neural tube | 3.22e-07 | 41 |
future forebrain | 3.22e-07 | 41 |