FFCP PHASE1:Hg19::chr6:49712147..49712158,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16904 | |||
|TSSclassifier=strong | |||
|UniProt=P16562,P54108 | |||
|association_with_transcript=0bp_to_ENST00000354620,ENST00000433368,NM_001190986_5end | |||
|coexpression_cluster_id=C4612 | |||
|description=CAGE_peak_4_at_CRISP3_5end | |||
|id=chr6:49712147..49712158,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.46e-10;1!UBERON:0005754;4.86e-10;1!UBERON:0006242;1.99e-09;1 | |||
|ontology_enrichment_disease=DOID:1036!3.76e-08!8;DOID:8692!3.59e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.99e-09;1!DOID:1357;1.99e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.08e-09,1;DOID:1357,2.08e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.77e-11!115;UBERON:0003127!1.35e-09!2;UBERON:0000341!3.25e-09!2;UBERON:0006947!6.22e-07!3;UBERON:0004054!6.22e-07!3;UBERON:0001723!8.49e-07!3;UBERON:0001033!8.49e-07!3;UBERON:0010056!8.49e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.46e-17;2!UBERON:0006947;1.29e-12;3!UBERON:0004054;1.29e-12;3!UBERON:0001723;2.47e-12;3!UBERON:0001033;2.47e-12;3!UBERON:0001000;3.74e-10;1!UBERON:0005352;3.74e-10;1!UBERON:0001736;4.46e-10;1!UBERON:0000998;4.86e-10;1!UBERON:0006868;4.86e-10;1!UBERON:0002372;9.29e-10;1!UBERON:0001961;9.29e-10;1!UBERON:0001744;9.29e-10;1!UBERON:0001042;9.29e-10;1!UBERON:0001735;9.29e-10;1!UBERON:0005904;1.10e-09;4!UBERON:0001764;1.99e-09;1!UBERON:0001825;1.99e-09;1!UBERON:0000058;3.26e-08;10!UBERON:0000165;1.79e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.34e-17,2;UBERON:0006947,1.29e-12,3;UBERON:0004054,1.29e-12,3;UBERON:0001723,2.40e-12,3;UBERON:0001033,2.40e-12,3;UBERON:0010056,2.40e-12,3;UBERON:0007023,3.66e-10,114;UBERON:0001000,3.74e-10,1;UBERON:0005352,3.74e-10,1;UBERON:0001736,4.46e-10,1;UBERON:0006298,4.46e-10,1;UBERON:0000998,4.87e-10,1;UBERON:0006868,4.87e-10,1;UBERON:0002372,9.70e-10,1;UBERON:0001961,9.70e-10,1;UBERON:0001744,9.70e-10,1;UBERON:0001735,9.70e-10,1;UBERON:0005904,1.10e-09,4;UBERON:0000166,1.45e-09,22;UBERON:0001764,2.08e-09,1;UBERON:0001825,2.08e-09,1;UBERON:0001042,3.47e-08,10;UBERON:0009145,3.47e-08,10;UBERON:0000161,5.09e-08,36;UBERON:0006562,1.75e-07,11;UBERON:0000165,3.31e-07,29;UBERON:0000930,3.31e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,6.77167111206413,0,0,0,0,0,0,0,0,0,7.38524393686274,1.08182271390393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,1.79021174675609,0,0.789147245095469,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,3.76752615348059,0.166211681900156,0.451191321234361,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.3172576644507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0.872901148395775,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3344938492782,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,2.04082041411336,0,0,0,0,0,0,0,1.04617282831313,0,0,0,0,0,11.1859113293272,0,0,13.5483856061097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.264585303406,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0,0,26.1475691540588,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,2.55880778281177,0.23806443146374,0,0,0.224263725161227,0,0,4.13661821004227,11.2936989358143,3.09819443867103,2.94061042109973,2.32862249582209,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p4@CRISP3 | |||
}} |
Revision as of 12:16, 22 January 2014
Short description: | p4@CRISP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CRISP3_5end |
Coexpression cluster: | C4612_ductus_smallcell_submaxillary_salivary_acute_seminal_ovary |
Association with transcript: | 0bp_to_ENST00000354620, ENST00000433368, NM_001190986_5end |
EntrezGene: | CRISP3 |
HGNC: | 16904 |
UniProt: | P16562P54108 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.34e-17 | 2 |
male genital duct | 1.29e-12 | 3 |
internal male genitalia | 1.29e-12 | 3 |
tongue | 2.40e-12 | 3 |
gustatory system | 2.40e-12 | 3 |
future tongue | 2.40e-12 | 3 |
adult organism | 3.66e-10 | 114 |
vas deferens | 3.74e-10 | 1 |
spermatic cord | 3.74e-10 | 1 |
submandibular gland | 4.46e-10 | 1 |
submandibular gland primordium | 4.46e-10 | 1 |
seminal vesicle | 4.87e-10 | 1 |
seminal fluid secreting gland | 4.87e-10 | 1 |
tonsil | 9.70e-10 | 1 |
mucosa-associated lymphoid tissue | 9.70e-10 | 1 |
lymphoid tissue | 9.70e-10 | 1 |
tonsillar ring | 9.70e-10 | 1 |
duct of male reproductive system | 1.10e-09 | 4 |
oral opening | 1.45e-09 | 22 |
maxillary sinus | 2.08e-09 | 1 |
paranasal sinus | 2.08e-09 | 1 |
chordate pharynx | 3.47e-08 | 10 |
pharyngeal region of foregut | 3.47e-08 | 10 |
orifice | 5.09e-08 | 36 |
pharynx | 1.75e-07 | 11 |
mouth | 3.31e-07 | 29 |
stomodeum | 3.31e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.08e-09 | 1 |
maxillary sinus cancer | 2.08e-09 | 1 |