FFCP PHASE1:Hg19::chr6:123958410..123958421,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=10345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |||
|TSSclassifier=not | |||
|UniProt=Q5SWK9,Q13061,Q8IVK2 | |||
|association_with_transcript=-172bp_to_ENST00000334268,NM_001251987,NM_006073_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_6_at_TRDN_5end | |||
|id=chr6:123958410..123958421,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.32e-12;1!UBERON:0010227;1.57e-12;1!UBERON:0004140;3.44e-12;1!UBERON:0005062;6.37e-12;4!UBERON:0007284;6.37e-12;4!UBERON:0003104;1.38e-08;31!UBERON:0008814;4.83e-07;2!UBERON:0010056;4.83e-07;2 | |||
|ontology_enrichment_disease=DOID:114!6.88e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-25!115;UBERON:0007100!5.79e-15!27;UBERON:0003978!1.75e-14!3;UBERON:0009751!1.75e-14!3;UBERON:0000946!1.75e-14!3;UBERON:0002523!1.75e-14!3;UBERON:0005983!1.75e-14!3;UBERON:0002165!1.75e-14!3;UBERON:0002062!1.75e-14!3;UBERON:0007280!1.75e-14!3;UBERON:0003103!5.40e-13!69;UBERON:0001630!1.27e-10!2;UBERON:0005090!1.27e-10!2;UBERON:0000341!1.61e-10!2;UBERON:0002081!2.92e-10!2;UBERON:0002133!3.66e-10!2;UBERON:0003127!1.28e-09!2;UBERON:0000948!2.02e-08!24;UBERON:0005498!2.02e-08!24;UBERON:0004140!2.02e-08!24;UBERON:0009881!2.02e-08!24;UBERON:0004141!2.02e-08!24;UBERON:0003084!2.02e-08!24;UBERON:0007005!2.02e-08!24;UBERON:0004139!2.02e-08!24;UBERON:0004291!2.02e-08!24;UBERON:0001723!2.22e-07!3;UBERON:0001033!2.22e-07!3;UBERON:0010056!2.22e-07!3;UBERON:0001042!2.82e-07!10;UBERON:0009145!2.82e-07!10;UBERON:0004151!4.20e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.34e-23;2!UBERON:0001630;1.34e-23;2!UBERON:0000341;2.49e-23;2!UBERON:0001723;3.42e-16;3!UBERON:0001033;3.42e-16;3!UBERON:0003978;1.42e-15;3!UBERON:0000946;1.42e-15;3!UBERON:0007100;2.00e-15;25!UBERON:0001389;8.84e-13;1!UBERON:0000026;8.84e-13;1!UBERON:0008784;8.84e-13;1!UBERON:0006058;8.84e-13;1!UBERON:0003663;8.84e-13;1!UBERON:0004256;8.84e-13;1!UBERON:0004708;8.84e-13;1!UBERON:0002101;8.84e-13;1!UBERON:0004709;8.84e-13;1!UBERON:0002529;8.84e-13;1!UBERON:0010538;8.84e-13;1!UBERON:0003661;8.84e-13;1!UBERON:0010890;8.84e-13;1!UBERON:0002471;8.84e-13;1!UBERON:0001383;8.84e-13;1!UBERON:0010758;8.84e-13;1!UBERON:0010707;8.84e-13;1!UBERON:0000978;8.84e-13;1!UBERON:0002103;8.84e-13;1!UBERON:0001665;8.84e-13;1!UBERON:0003823;8.84e-13;1!UBERON:0000154;8.84e-13;1!UBERON:0010709;8.84e-13;1!UBERON:0000989;1.32e-12;1!UBERON:0008811;1.32e-12;1!UBERON:0002426;1.32e-12;1!UBERON:0003831;1.32e-12;1!UBERON:0003898;1.32e-12;1!UBERON:0004830;1.32e-12;1!UBERON:0003830;1.32e-12;1!UBERON:0005175;1.32e-12;1!UBERON:0001774;1.32e-12;1!UBERON:0001103;1.32e-12;1!UBERON:0002079;1.57e-12;1!UBERON:0002146;1.96e-12;1!UBERON:0005623;1.96e-12;1!UBERON:0000948;2.23e-12;22!UBERON:0007029;3.44e-12;1!UBERON:0002135;3.44e-12;1!UBERON:0001134;1.69e-11;16!UBERON:0002036;1.69e-11;16!UBERON:0000974;2.09e-08;6!UBERON:0002081;6.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.26e-23,2;UBERON:0001630,1.26e-23,2;UBERON:0000341,2.23e-23,2;UBERON:0001723,3.43e-16,3;UBERON:0001033,3.43e-16,3;UBERON:0010056,3.43e-16,3;UBERON:0003978,1.32e-15,3;UBERON:0009751,1.32e-15,3;UBERON:0000946,1.32e-15,3;UBERON:0002523,1.32e-15,3;UBERON:0005983,1.32e-15,3;UBERON:0002165,1.32e-15,3;UBERON:0002062,1.32e-15,3;UBERON:0007280,1.32e-15,3;UBERON:0007100,2.80e-14,27;UBERON:0005418,8.85e-13,1;UBERON:0001389,8.85e-13,1;UBERON:0000026,8.85e-13,1;UBERON:0008784,8.85e-13,1;UBERON:0006058,8.85e-13,1;UBERON:0003663,8.85e-13,1;UBERON:0004256,8.85e-13,1;UBERON:0004708,8.85e-13,1;UBERON:0002101,8.85e-13,1;UBERON:0004709,8.85e-13,1;UBERON:0002529,8.85e-13,1;UBERON:0010538,8.85e-13,1;UBERON:0003661,8.85e-13,1;UBERON:0010890,8.85e-13,1;UBERON:0002471,8.85e-13,1;UBERON:0001383,8.85e-13,1;UBERON:0004357,8.85e-13,1;UBERON:0004347,8.85e-13,1;UBERON:0005420,8.85e-13,1;UBERON:0005732,8.85e-13,1;UBERON:0010758,8.85e-13,1;UBERON:0010707,8.85e-13,1;UBERON:0000978,8.85e-13,1;UBERON:0002103,8.85e-13,1;UBERON:0001665,8.85e-13,1;UBERON:0003823,8.85e-13,1;UBERON:0000154,8.85e-13,1;UBERON:0010709,8.85e-13,1;UBERON:0005733,8.85e-13,1;UBERON:0005730,8.85e-13,1;UBERON:0002426,1.25e-12,1;UBERON:0003831,1.25e-12,1;UBERON:0003898,1.25e-12,1;UBERON:0004830,1.25e-12,1;UBERON:0003830,1.25e-12,1;UBERON:0005175,1.25e-12,1;UBERON:0001774,1.25e-12,1;UBERON:0001103,1.25e-12,1;UBERON:0010084,1.25e-12,1;UBERON:0000989,1.40e-12,1;UBERON:0008811,1.40e-12,1;UBERON:0006258,1.40e-12,1;UBERON:0005876,1.40e-12,1;UBERON:0004874,1.40e-12,1;UBERON:0002079,1.57e-12,1;UBERON:0002146,2.20e-12,1;UBERON:0005623,2.20e-12,1;UBERON:0002135,2.75e-12,1;UBERON:0007029,3.45e-12,1;UBERON:0000948,2.32e-11,24;UBERON:0005498,2.32e-11,24;UBERON:0004140,2.32e-11,24;UBERON:0009881,2.32e-11,24;UBERON:0004141,2.32e-11,24;UBERON:0003084,2.32e-11,24;UBERON:0007005,2.32e-11,24;UBERON:0004139,2.32e-11,24;UBERON:0004291,2.32e-11,24;UBERON:0003103,1.54e-09,68;UBERON:0004797,3.35e-07,7;UBERON:0002081,6.80e-07,2;UBERON:0010227,6.80e-07,2;UBERON:0007023,7.82e-07,114;UBERON:0002133,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,2.29160424011684,0.717873024576814,0.599037001496973,0.429226048136571,2.67805748930247,1.88113722962834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,4.46590060550365,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500335809236594,0,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76914604625474,12.1142112090371,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.151557396436479,0,0,0,5.11761556562354,2.85677317756488,0,0.0620747142958579,0,0,0,8.27323642008453,6.16019941953506,0.134704106029175,0.286888821570705,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p6@TRDN | |||
}} |
Revision as of 13:42, 22 January 2014
Short description: | p6@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_6_at_TRDN_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -172bp_to_ENST00000334268, NM_001251987, NM_006073_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | Q5SWK9Q13061Q8IVK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data