FFCP PHASE1:Hg19::chr6:125284405..125284429,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-220bp_to_ENST00000439075_5end | |||
|coexpression_cluster_id=C383 | |||
|description=CAGE_peak_4_at_ENST00000439075_5end | |||
|id=chr6:125284405..125284429,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.45e-12;2!CL:0000558;2.45e-12;2!CL:0002541;1.17e-08;3!CL:0002592;1.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.62e-12,2;CL:0000765,3.62e-12,2;CL:0000050,3.62e-12,2;CL:0000038,3.62e-12,2;CL:0000558,3.62e-12,2;CL:0000547,3.62e-12,2;CL:0000549,3.62e-12,2;CL:0000550,3.62e-12,2;CL:0000552,3.62e-12,2;CL:0002592,1.04e-08,3;CL:0002541,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.17e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;8.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.59e-08!129;UBERON:0007811!1.59e-08!129;UBERON:0000033!4.43e-08!123;UBERON:0000475!1.07e-07!365;UBERON:0000924!2.18e-07!173;UBERON:0006601!2.18e-07!173;UBERON:0000468!3.03e-07!659;UBERON:0004121!3.31e-07!169;UBERON:0001893!4.29e-07!34;UBERON:0002791!9.09e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;1.17e-08;3!UBERON:0005985;1.17e-08;3!UBERON:0003124;1.17e-08;3!UBERON:0001621;1.17e-08;3!UBERON:0000920;1.17e-08;3!UBERON:0003343;6.49e-07;4!UBERON:0004785;6.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.04e-08,3;UBERON:0000920,1.40e-08,3;UBERON:0003343,6.50e-07,4;UBERON:0004785,6.50e-07,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.567208902984407,0,0.527008714158756,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.454072282934794,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0,0,0.877955241761676,0.612975591598039,0.600952235626387,0,0.179389635688862,0.427114777637135,0,0,0,0.257640540045629,0.558350568994769,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0.868687840005475,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0.657779629937804,1.0457418040996,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0.170453254832202,0.178064071293475,0.330569830721956,0.192190067365106,1.65896526242959,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,1.58510321173008,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0.994147647766298,0.281338832821026,0.111308705022906,0,0.211125408127993,0,0,0,0.920418142519393,0,0.622079175323615,0,0.716084698702437,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,1.52581736317083,0.221158519862449,0,0.219385397153973,0,0.697118721393016,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0.392125068635479,0,0,0.476809736941136,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,0,0,0,0.31593289814244,0,0.311064574191741,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.305994652908965,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0.242998226632099,0.670869375198532,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,1.87426823963964,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0.471612915298998,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0.785270481251171,0.886068179966986,0,0.500763722825999,0,0.332787154610557,0.0620964029413835,0.276697269872462,0,0.303298235083296,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0.337884881306145,0,0.345430341731199,0.607719912354764,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0.383683113910955,0,0.314531883711793,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0.705351887381368,0,0.321146125482298,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0.687034029507179,10.3813356546012,0.366857197043358,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.339848664884159,0.065772773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| |||
|short_description=p4@ENST00000439075 | |||
}} |
Revision as of 13:43, 22 January 2014
Short description: | p4@ENST00000439075 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ENST00000439075_5end |
Coexpression cluster: | C383_oral_liposarcoma_small_Small_skeletal_amniotic_Astrocyte |
Association with transcript: | -220bp_to_ENST00000439075_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.62e-12 | 2 |
erythroblast | 3.62e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 3.62e-12 | 2 |
erythroid progenitor cell | 3.62e-12 | 2 |
reticulocyte | 3.62e-12 | 2 |
proerythroblast | 3.62e-12 | 2 |
basophilic erythroblast | 3.62e-12 | 2 |
polychromatophilic erythroblast | 3.62e-12 | 2 |
orthochromatic erythroblast | 3.62e-12 | 2 |
smooth muscle cell of the coronary artery | 1.04e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.04e-08 | 3 |
egg chorion | 1.40e-08 | 3 |
mucosa of oral region | 6.50e-07 | 4 |
respiratory system mucosa | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.14e-07 | 4 |