FFCP PHASE1:Hg19::chr7:33944150..33944169,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=168667 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24154 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N8U9,G5E9K4 | |||
|association_with_transcript=-353bp_to_ENST00000297161,ENST00000448280,NM_133468_5end | |||
|description=CAGE_peak_8_at_BMPER_5end | |||
|id=chr7:33944150..33944169,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.67e-27!180;CL:0000057!2.01e-21!75;CL:0002620!9.01e-19!23;CL:0000359!1.33e-18!32;CL:0000192!1.64e-15!42;CL:0000514!1.64e-15!42;CL:0000680!2.41e-14!57;CL:0000056!2.41e-14!57;CL:0000355!2.41e-14!57;CL:0000187!1.25e-13!54;CL:0000183!1.76e-12!59;CL:0000393!3.32e-11!60;CL:0000211!3.32e-11!60;CL:0000048!4.72e-08!430;CL:0002539!6.19e-08!10;CL:0000034!7.48e-08!444;CL:0000723!7.97e-08!436;CL:0002595!2.43e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.56e-38;32!CL:0000192;3.67e-23;43!CL:0002595;1.53e-22;5!CL:0002539;9.47e-21;10!CL:0002592;9.42e-14;3!CL:0002521;1.05e-13;3!CL:0000187;7.18e-13;55!CL:0000393;3.23e-11;61!CL:0000211;3.23e-11;61!CL:1000306;8.44e-11;4!CL:0002547;8.44e-11;4!CL:0002593;9.18e-10;2!CL:0002620;5.38e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.27e-40,32;CL:0000192,4.19e-29,43;CL:0000514,4.19e-29,43;CL:0000187,1.57e-24,55;CL:0000680,5.05e-23,58;CL:0000056,5.05e-23,58;CL:0000355,5.05e-23,58;CL:0002595,2.57e-22,5;CL:0000393,1.15e-21,61;CL:0000211,1.15e-21,61;CL:0002539,6.00e-21,10;CL:0002592,6.39e-14,3;CL:0002521,8.31e-14,3;CL:1000306,1.26e-10,4;CL:0002547,1.26e-10,4;CL:0000048,4.95e-10,427;CL:0000723,9.08e-10,433;CL:0002593,1.69e-09,2;CL:0000034,1.99e-09,441;CL:0000222,1.00e-08,121;CL:0002620,5.96e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.67e-23;43!CL:0000355;1.90e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!2.54e-17!33;UBERON:0004571!2.54e-17!33;UBERON:0004290!3.48e-17!70;UBERON:0000914!1.26e-16!83;UBERON:0002329!1.26e-16!83;UBERON:0003077!1.26e-16!83;UBERON:0003059!1.26e-16!83;UBERON:0007282!1.26e-16!83;UBERON:0009618!1.26e-16!83;UBERON:0007285!1.26e-16!83;UBERON:0001637!1.77e-16!42;UBERON:0003509!1.77e-16!42;UBERON:0004572!1.77e-16!42;UBERON:0002199!1.72e-15!45;UBERON:0002416!1.72e-15!45;UBERON:0000486!2.10e-15!82;UBERON:0001134!1.32e-14!61;UBERON:0002036!1.32e-14!61;UBERON:0003082!1.32e-14!61;UBERON:0002385!1.51e-14!63;UBERON:0001015!1.51e-14!63;UBERON:0000383!1.51e-14!63;UBERON:0002097!6.16e-12!40;UBERON:0001981!6.52e-12!60;UBERON:0007500!6.52e-12!60;UBERON:0004537!6.52e-12!60;UBERON:0006965!6.52e-12!60;UBERON:0004872!4.08e-11!84;UBERON:0000475!5.26e-11!365;UBERON:0000055!7.62e-10!69;UBERON:0003102!8.18e-10!95;UBERON:0005256!1.60e-09!143;UBERON:0003914!4.98e-09!118;UBERON:0002049!1.38e-08!79;UBERON:0007798!1.38e-08!79;UBERON:0004237!6.19e-08!10;UBERON:0004695!6.19e-08!10;UBERON:0002111!6.19e-08!10;UBERON:0004178!6.19e-08!10;UBERON:0001135!1.03e-07!15;UBERON:0003834!2.43e-07!5;UBERON:0001533!2.43e-07!5;UBERON:0004535!2.50e-07!110;UBERON:0002100!3.36e-07!216;UBERON:0001009!7.81e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.17e-42;33!UBERON:0004571;1.17e-42;33!UBERON:0001637;4.57e-31;42!UBERON:0003509;4.57e-31;42!UBERON:0004572;4.57e-31;42!UBERON:0003834;1.53e-22;5!UBERON:0001533;1.53e-22;5!UBERON:0004237;9.47e-21;10!UBERON:0004695;9.47e-21;10!UBERON:0002111;9.47e-21;10!UBERON:0004178;9.47e-21;10!UBERON:0000947;3.14e-19;21!UBERON:0010191;3.14e-19;21!UBERON:0003513;5.00e-16;7!UBERON:0007500;1.27e-15;56!UBERON:0001981;1.27e-15;56!UBERON:0004537;1.27e-15;56!UBERON:0003498;9.42e-14;3!UBERON:0005985;9.42e-14;3!UBERON:0001621;9.42e-14;3!UBERON:0002190;1.05e-13;3!UBERON:0001135;1.65e-13;15!UBERON:0000055;2.51e-12;65!UBERON:0004797;8.44e-11;4!UBERON:0000415;8.44e-11;4!UBERON:0007240;8.44e-11;4!UBERON:0005742;8.44e-11;4!UBERON:0005734;8.44e-11;4!UBERON:0004664;8.44e-11;4!UBERON:0004663;8.44e-11;4!UBERON:0002456;9.18e-10;2!UBERON:0002049;5.70e-09;75!UBERON:0007798;5.70e-09;75!UBERON:0003914;1.01e-08;74!UBERON:0002072;2.10e-08;5!UBERON:0002385;1.08e-07;31!UBERON:0001015;1.08e-07;31!UBERON:0000383;1.08e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,5.86e-49,33;UBERON:0004571,5.86e-49,33;UBERON:0001637,1.67e-41,42;UBERON:0003509,1.67e-41,42;UBERON:0004572,1.67e-41,42;UBERON:0007500,4.72e-28,59;UBERON:0001981,4.72e-28,59;UBERON:0004537,4.72e-28,59;UBERON:0006965,4.72e-28,59;UBERON:0000055,1.17e-23,68;UBERON:0001134,1.17e-23,62;UBERON:0002036,1.17e-23,62;UBERON:0003082,1.17e-23,62;UBERON:0002385,9.14e-23,64;UBERON:0001015,9.14e-23,64;UBERON:0000383,9.14e-23,64;UBERON:0004872,1.37e-22,83;UBERON:0003834,2.57e-22,5;UBERON:0001533,2.57e-22,5;UBERON:0002329,3.12e-22,71;UBERON:0003059,3.12e-22,71;UBERON:0007282,3.12e-22,71;UBERON:0004290,3.12e-22,71;UBERON:0009618,3.12e-22,71;UBERON:0003077,7.48e-22,72;UBERON:0007285,7.48e-22,72;UBERON:0007524,1.75e-21,73;UBERON:0004237,6.00e-21,10;UBERON:0004695,6.00e-21,10;UBERON:0002111,6.00e-21,10;UBERON:0004178,6.00e-21,10;UBERON:0002049,5.70e-20,78;UBERON:0007798,5.70e-20,78;UBERON:0007503,8.82e-20,78;UBERON:0000947,2.95e-19,21;UBERON:0010191,2.95e-19,21;UBERON:0000486,2.76e-18,83;UBERON:0003914,6.76e-16,117;UBERON:0004535,7.01e-16,109;UBERON:0003513,7.20e-16,7;UBERON:0001009,2.62e-15,112;UBERON:0003498,1.91e-14,5;UBERON:0005985,1.91e-14,5;UBERON:0001621,6.39e-14,3;UBERON:0002190,8.31e-14,3;UBERON:0001135,1.23e-13,15;UBERON:0005256,4.18e-12,122;UBERON:0000415,1.26e-10,4;UBERON:0007240,1.26e-10,4;UBERON:0005742,1.26e-10,4;UBERON:0005734,1.26e-10,4;UBERON:0004664,1.26e-10,4;UBERON:0004663,1.26e-10,4;UBERON:0002456,1.69e-09,2;UBERON:0000490,4.24e-09,148;UBERON:0002199,5.96e-09,46;UBERON:0002416,5.96e-09,46;UBERON:0002072,1.83e-08,5;UBERON:0003104,4.74e-08,160;UBERON:0009142,4.74e-08,160;UBERON:0000025,1.77e-07,192 | |||
|phase1_expression=0,1.49870366723688,0.140954404095971,0,0.893922188854576,0,5.06599756336621,1.26343974685366,1.56711376919903,0.245733936501509,0.697801167972428,0,0,0,0,1.34465029290355,0,2.19093027116212,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,1.0843174571537,2.00535164254356,0.144846518960824,0,0.973269740605272,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,6.62045904066094,4.01571269048339,1.06400514659507,0,0,0.98667019366864,0.311211035399766,0.134710672069688,1.14423332179421,0,0,0,0.624320153660641,1.1409436430889,0.448346041655403,0.23486899728753,0.323745888736263,0.842704840213491,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.45071417671979,0.113432183160021,0.89694817844431,0.85422955527427,1.05965950579781,1.20036438433761,0.618315175430633,1.03056216018252,0.558350568994769,1.68776332241266,0.0974370051611986,0.757301322732344,1.28869858099219,0.161646056818812,1.77504796258307,0.10075209822764,0.67824236924195,0,0,0.573609190778008,0,0,0.348581828608555,0,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.955719759148911,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,1.40373983744043,0,0,4.7221852024596,1.3940745403212,5.23657086299351,1.59691809095107,2.60979897622522,0.18532421910392,1.43124886741991,0,0,0.190630193923825,0,0.42793898803392,2.54562598340749,0.78494864019923,0.179872457583315,0,0.235624804691373,1.61745985258653,7.92551605865041,1.26377536871694,0,3.41198885483798,1.05650146756755,0,0.989838023675989,2.26016233240486,3.85955740482287,3.98063385144732,4.38450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0.196498082026242,0,0,0.633322905892992,0.329294892959902,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0,2.48831670129446,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,1.62899880526114,0.864221491201268,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0.233713309847224,1.10961172300523,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0,0.73927574994817,1.11507737014592,0,0.310525913752519,3.7323558705677,0,1.5652351854352,0.150257608997218,4.18885733385675,0.406870733204662,0.363697318405119,0.107410557042488,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0.844712203265363,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.40341013740704,0,0,0,0,0.202612753855184,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.394636641377094,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0.940634592723046,0,0,0,0.297046400327086,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0.371995018166751,0.924351257262837,1.73050624849516,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@BMPER | |||
}} |
Revision as of 16:28, 22 January 2014
Short description: | p8@BMPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BMPER_5end |
Coexpression cluster: | NA |
Association with transcript: | -353bp_to_ENST00000297161, ENST00000448280, NM_133468_5end |
EntrezGene: | BMPER |
HGNC: | 24154 |
UniProt: | Q8N8U9G5E9K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.27e-40 | 32 |
smooth muscle cell | 4.19e-29 | 43 |
smooth muscle myoblast | 4.19e-29 | 43 |
muscle cell | 1.57e-24 | 55 |
muscle precursor cell | 5.05e-23 | 58 |
myoblast | 5.05e-23 | 58 |
multi-potent skeletal muscle stem cell | 5.05e-23 | 58 |
smooth muscle cell of the subclavian artery | 2.57e-22 | 5 |
electrically responsive cell | 1.15e-21 | 61 |
electrically active cell | 1.15e-21 | 61 |
aortic smooth muscle cell | 6.00e-21 | 10 |
smooth muscle cell of the coronary artery | 6.39e-14 | 3 |
subcutaneous fat cell | 8.31e-14 | 3 |
fibroblast of tunica adventitia of artery | 1.26e-10 | 4 |
fibroblast of the aortic adventitia | 1.26e-10 | 4 |
multi fate stem cell | 4.95e-10 | 427 |
somatic stem cell | 9.08e-10 | 433 |
smooth muscle cell of the internal thoracic artery | 1.69e-09 | 2 |
stem cell | 1.99e-09 | 441 |
mesodermal cell | 1.00e-08 | 121 |
skin fibroblast | 5.96e-08 | 23 |