FFCP PHASE1:Hg19::chr7:83824296..83824315,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |||
|TSSclassifier=strong | |||
|UniProt=Q14563 | |||
|association_with_transcript=-79bp_to_ENST00000265362,NM_006080,uc003uhz.2_5end | |||
|coexpression_cluster_id=C1284 | |||
|description=CAGE_peak_2_at_SEMA3A_5end | |||
|id=chr7:83824296..83824315,- | |||
|ontology_enrichment_celltype=CL:0000055!1.53e-09!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.12e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!7.36e-18!347;UBERON:0000475!2.92e-16!365;UBERON:0000467!8.73e-16!625;UBERON:0000480!9.26e-16!626;UBERON:0000468!9.51e-14!659;UBERON:0000062!1.10e-12!511;UBERON:0000033!5.74e-12!123;UBERON:0000153!2.57e-11!129;UBERON:0007811!2.57e-11!129;UBERON:0000922!1.16e-10!612;UBERON:0002050!5.16e-10!605;UBERON:0005423!5.16e-10!605;UBERON:0000923!9.81e-10!604;UBERON:0005291!9.81e-10!604;UBERON:0006598!9.81e-10!604;UBERON:0002532!9.81e-10!604;UBERON:0001007!1.15e-09!155;UBERON:0001555!1.15e-09!155;UBERON:0007026!1.15e-09!155;UBERON:0005409!1.25e-09!35;UBERON:0004119!1.76e-09!169;UBERON:0000925!1.76e-09!169;UBERON:0006595!1.76e-09!169;UBERON:0000477!2.53e-09!286;UBERON:0000160!2.76e-09!27;UBERON:0000924!1.01e-08!173;UBERON:0006601!1.01e-08!173;UBERON:0004121!1.04e-08!169;UBERON:0000483!3.88e-08!309;UBERON:0000064!3.99e-08!219;UBERON:0000119!3.99e-08!312;UBERON:0005743!4.26e-08!86;UBERON:0001017!5.68e-08!82;UBERON:0000073!2.11e-07!94;UBERON:0001016!2.11e-07!94;UBERON:0004111!9.07e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.55e-08;17!UBERON:0005409;3.59e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.71e-12,223;UBERON:0001007,2.76e-09,145;UBERON:0001555,2.76e-09,145;UBERON:0007026,2.76e-09,145;UBERON:0004119,8.94e-09,160;UBERON:0000925,8.94e-09,160;UBERON:0006595,8.94e-09,160;UBERON:0000160,6.45e-08,17;UBERON:0005409,1.04e-07,25;UBERON:0000922,4.96e-07,592 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,1.26343974685366,0.783556884599516,1.96587149201207,0,0.218441372130172,0,1.60896258848061,0.662794751455832,2.01697543935533,1.80808358407193,0,0.487932798790507,0.861847406537515,0.408001382488506,0.940364164434263,2.86235987131057,2.87436292653057,4.89616294419731,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0,0.619264493264304,1.83884244895785,1.8072355126695,1.84877005083394,0,0,0,1.10799081706375,0,0.217010870715852,0.223915474239924,0,0.77272670290256,0,0,0,0,0,0,0,0,0,0.689491361473237,2.5819387343353,0,0,0,0,3.36692281607993,2.24650318953266,1.27867425159808,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,1.19350006319454,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0.657751618414705,0.829050053357545,1.44901542867526,0.296573126324121,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,1.44575660953827,0.50133791063589,1.30361867064741,3.9764297352555,20.4386645527107,13.7075484887898,5.32150553910154,8.95914814069886,0.523916301990851,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,1.25849830862972,0,0.208994966536811,0.258416759169329,1.06729878806013,2.00832367658802,2.41697590265488,5.32190474002959,3.41686880567437,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,1.01304409331664,4.237093786023,10.3261183469573,7.09336764396714,1.68203280042692,0,0.98667019366864,2.17847724779836,0.404132016209064,0.326923806226917,0.454072282934794,3.45705554687999,3.51482147750695,0,1.1409436430889,0.896692083310806,1.76151747965647,1.45685649931318,2.24721290723598,5.30800845262722,5.28187564440602,2.16984140469107,20.1960485737949,1.97813543422845,0,0,6.73344455816265,4.62938523526267,10.528436388399,7.46261955497424,3.0648779579902,4.20666564938471,0.453728732640084,3.94657198515496,3.41691822109708,1.90738711043606,1.80054657650641,1.75189299705346,1.54584324027377,4.28068769562657,5.40084263172052,0.584622030967192,1.51460264546469,3.12969655383818,0.484938170456436,4.61512470271599,1.71278566986988,2.03472710772585,1.54608682530637,5.18217629122586,2.29443676311203,0.121973706129595,1.06023814657188,0.929551542956147,0.725627385107593,0.252320850875628,2.55484151353081,0,2.57296375277154,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,6.76436411987125,6.17644117074692,0.109750285408626,0,0.100528972411631,2.77765335475589,2.6064664424826,0,5.77325368101093,4.63721619900307,3.99189560401794,6.0633908059651,5.09284063834272,8.37118269832232,0,0,1.23108503043699,2.10603838625314,1.0404181360211,0.93733833986777,1.17587489739202,5.10390350072591,0.268675568108545,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.571652865261156,0.672786506072164,0,4.03360572015225,0.258543431515556,0,1.690605505112,2.92531928243358,8.32059495290929,0.257207374262142,1.41849132023278,0,2.43062589218851,0,0,3.58309802723109,1.77695974371273,0.791951872933429,0.602878754119172,1.74306691720059,0.399891964728228,2.43247561282381,1.00451418286425,0,0.239624855491583,0,2.85273810081437,0,0,0,0,0,0,0,1.01637849688985,7.8083912314573,1.54657762555539,2.68026024534958,5.74144876487847,0,0,0,2.08575535922538,2.00068208423871,0.542530047399471,1.24782516918484,0.178428988797162,0.315404830067869,0.234282829985426,2.40756879782175,0,0,1.32845119707087,1.10621501125022,9.55719759148911,0,0,0,0,0.106727557803444,0,3.32870879020994,0.30239029332968,0,0,0,0.512556597022804,2.55853624533352,0.482561763430822,0,2.31314540703983,3.72879623157567,6.24166385704949,5.71179872101983,3.48631135379878,10.0313343161046,1.60405176242628,3.31491560169227,11.4814448164607,9.46874073634929,8.91646021724084,1.80479845162965,4.6979355633693,2.35304930753057,1.46139224653261,6.54420099135829,0,0.170093705276516,2.80690690932781,0,1.62567862526312,0.501689773854853,1.01950509218015,0,0.447749509444357,0,0,2.3080511260475,0.656029291399411,0.325378394664303,0.9273691048295,0.183138929636687,0.41254749960294,0,0,3.21367859688319,1.35339005608971,0.616194468458578,1.07452572308291,0.689182862422653,0.322260734604821,1.0151168573996,0.767039646744908,2.22580089116843,6.28082678371717,0.768760269460425,9.18811529961006,4.2486267959331,0,5.98143458978216,3.485186350803,4.31247012246524,0.532306030317022,6.95946393660058,0.55597265731176,0.429374660225974,2.97726695487734,2.84741482246853,1.14378116354295,1.02359116524534,1.28381696410176,8.27328444607436,1.56989728039846,5.93579110024939,2.47083326762449,6.9509317383955,2.22400729730648,1.58510321173008,0.842516912477962,1.46290121726877,6.33655073041339,0,10.5104931784149,2.54529777516683,2.26016233240486,7.71911480964574,3.3171948762061,3.06915619677634,0,3.9353685122798,0.608731130888112,0.92947049429925,0.845086807596724,1.86434757865267,0.294747123039363,0.35667105148125,15.2547257550357,0,0.658589785919804,0.75894634753143,2.0996083214699,6.92799211623687,3.35151137767894,2.17781969722645,1.69458841398202,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,2.94048259177238,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0.425846237690326,2.74804275804612,0.307240764308458,0,0.500547425135725,0,0,0,0,0,0,0,0.586032717087576,14.6846231316911,0,0,0,0.296964680832639,0,2.98244294329889,1.1253553312841,1.11308705022906,0,0,1.79323189425963,1.38141957765574,0.251932747854276,4.90889676010343,0.861593638227486,2.17727711363265,9.34630851932199,0,0,5.32674390439441,0,1.11136990144637,1.93866549219044,2.13366625772258,3.99227596002388,0,0,2.17499872630438,13.65521379426,16.0179799684443,0,2.75794698593172,2.91604613383254,2.60437492399938,0.885741385813839,0.844175070377856,0,0.221158519862449,0.295547618953547,0.438770794307945,0.21787692703798,0.557694977114413,1.69290568708354,0.569710279235006,0,0,0,0.638002319463839,0.457987967009312,2.66517388009317,0,0,0,0,0,0,0,0,1.68798451622422,0,4.80600442875399,0.649165919226273,1.99052386215701,3.71521770914025,4.888241159469,0,0,0,0.808813595768125,1.60515529459758,2.34264445725339,0,5.47860933009851,64.8223613356028,0,8.46935012340647,1.83643656978294,2.27471686662557,2.1045278718029,1.45163467956146,10.634461963315,17.8735656172769,8.79012171540231,9.55779438183671,1.70765727617876,40.4930045198365,2.95051555169723,9.79923974143776,11.0565192357111,0.698906672968121,0.171986032471617,0,0.584714536689484,0.164230914106418,3.39461557709468,20.6519336458111,8.81324889044077,1.50746117111426,0.19871461170299,1.70939149080872,1.75996244461323,0.961905843018405,1.70762395791482,5.39485945871752,0.288180834308212,1.71804894248874,0,1.4405479798815,2.11229310461235,0.235694034616795,4.62074300650288,3.34729108199466,7.44586988745149,0,0.600420288709789,1.09524303113594,0,2.57859264851974,0,0.837847203816763,0.458320848023367,0,0.998395002494955,0.858452096273142,0.669514372325618,1.5452198671947,0.360299883542404,0,0.157566364614447,0,0.0674035438541849,6.69306874300292,1.01607998478941,0,1.49823746722733,3.3758161177654,2.88832816854191,5.40072439437941,0,0,1.15424157650247,0,0.0788057072991982,1.57363764404994,17.7408565352603,12.0122517353006,2.68681276247223,4.2881719582402,0,1.017074150619,8.14499402630569,6.04955043840887,5.22539776175055,2.39460383124975,0,0.340776043570843,4.30585947776478,0,0,2.06852730178481,0.79339561045614,0.171086837884329,0.704815022316672,2.0289608387862,2.20086027139532,0.828478110694391,8.43482237080316,0.395223263795889,0,11.4901426398633,0.544017803369474,0,0.612691153526923,0,0.942324577501406,1.77213635993397,2.80660409274515,1.752673029891,1.14681839138014,1.88579387612649,1.8628920882415,2.90532133366085,9.74847182104432,0.151649117541648,0,0,0,0.144921028610825,0.597019211547496,0.467426619694449,3.88364103051829,0.947015026375446,1.25783950876288,1.77962244319307,2.51724075236616,1.66354016139563,1.5543720058278,1.62640664988597,1.75226443880073,0.449803112163605,1.08684069813382,3.7323558705677,3.45594228925393,4.17396049449387,1.80309130796662,1.90402606084398,1.22061219961398,0.909243296012797,2.90008504014719,0.928067519756987,3.58286299828754,0,1.03018711554838,0.336749488765919,0,0.385239660814607,0.214441591374926,0.260994291965212,0,3.47283711485751,1.71315693154527,0.895444205407437,0,2.41212454536578,4.24053950270115,0,0,1.02496607435179,0,1.82315973706429,1.52084279766904,0,0,0,1.31043939538565,5.89854981008926,53.250655086374,2.19986135440423,1.17360902663555,1.72214979660816,10.7828031177699,5.33907255730338,2.79759015438889,6.22077260032973,0,3.98951802167723,0,0.655257829152084,0,14.6676694870161,4.33775174906508,0,0.318004350653419,4.49511946507144,0,18.6918250156062,15.31227386766,2.24802287837608,0,2.55414174491442,0.82046545696302,12.0994414186425,1.10651603942749,4.68279372332368,0,0.785181748008205,4.36487976386639,0.366857197043358,9.93520728892909,0,5.52287940848081,18.8970411010461,1.35378591028663,0,0,0,6.38710478289377,15.6727451390068,1.2832141077495,0.781078098613847,2.27355476151302,1.64881106504158,6.56369770821863,0.548257766857182,0.496211178389294,0,17.6312150142641,2.67850917939143,2.35398605553177,1.82089681270989,2.50428410486427,1.1531308121143,1.38280785066935,0.171488009437418,4.62194184242456,0.855046056317038,0.236387681767936,7.67496673055277,2.43328587836593,1.41404030924402,9.80952571598262,10.0447459256045,1.94334832096759,0.47775168788705,2.287249413653,0,0.116241425368125,2.78173235684127,3.20684545892101,0,0,0,0,8.63823605333127,7.49877961880588,0,12.1426640328347,1.86123831398592,3.82215575590973,0,0.196300467230486,0,0,0.821302454849976,2.3196288626764,1.94284397223656,0,17.308717439039,5.23248399421302,0.33883824611688,0.439762066981716,6.49140227336696,1.54348316215889,6.55678681511872,0.470317296361523,11.0316744789257,3.29947165942276,1.76677620403451,2.0793248022896,3.8039015482506,0.339854229375634,9.39839179798536,3.73855750246748,0.199882311849858,6.24938785119802,7.76368717774522,10.3511363029027,3.65168194123259,1.37618785021362,0.430018749454354,5.04868999018191,1.42782129400921,9.5997151874883,2.1161073620616,0.371995018166751,0,0,0.504665699340316,1.96678029534652,0.886889507080059,0.101988829741982,0,0,0,0.530450887527676,0,0,0.413731983447581,0.213233981900981,5.71354635512977,0.193766729508018,0.558672428662721,4.59740636580515,1.52753179867596,3.43599221228973,0.653150243690884,3.42233301085281,0.471464371102113,3.08405483188508,7.31852784401229,16.036443916362,0.426909383510862,17.3765054058246,0.898252021065869,0,0.122241444182866,5.2896503181046,0,3.62292828463847,0 | |||
|short_description=p2@SEMA3A | |||
}} |
Revision as of 17:40, 22 January 2014
Short description: | p2@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEMA3A_5end |
Coexpression cluster: | C1284_mucinous_ductal_small_endometrial_adrenal_extraskeletal_large |
Association with transcript: | -79bp_to_ENST00000265362, NM_006080, uc003uhz.2_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | Q14563 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.12e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.71e-12 | 223 |
digestive system | 2.76e-09 | 145 |
digestive tract | 2.76e-09 | 145 |
primitive gut | 2.76e-09 | 145 |
endoderm-derived structure | 8.94e-09 | 160 |
endoderm | 8.94e-09 | 160 |
presumptive endoderm | 8.94e-09 | 160 |
intestine | 6.45e-08 | 17 |
gastrointestinal system | 1.04e-07 | 25 |
embryo | 4.96e-07 | 592 |