FFCP PHASE1:Hg19::chr8:72755987..72756002,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7321 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-339bp_to_ENST00000521739_5end | |||
|description=CAGE_peak_7_at_MSC_5end | |||
|id=chr8:72755987..72756002,- | |||
|ontology_enrichment_celltype=CL:0000048!3.12e-21!430;CL:0000723!1.22e-20!436;CL:0000034!2.20e-19!444;CL:0000219!1.39e-18!390;CL:0000134!7.06e-17!358;CL:0002320!2.24e-16!365;CL:0000144!3.31e-15!625;CL:0002371!2.17e-14!591;CL:0002087!6.87e-12!119;CL:0000055!1.16e-11!180;CL:0000738!2.42e-09!140;CL:0002031!3.73e-09!124;CL:0000012!8.31e-09!682;CL:0000548!8.40e-09!679;CL:0000004!8.40e-09!679;CL:0000255!8.40e-09!679;CL:0000057!8.72e-09!75;CL:0002194!8.40e-08!63;CL:0000576!8.40e-08!63;CL:0000040!8.40e-08!63;CL:0000559!8.40e-08!63;CL:0000003!2.79e-07!722;CL:0002009!3.98e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-08;33!CL:0002057;1.77e-08;33!CL:0000473;8.41e-08;39!CL:0000234;8.41e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,3.01e-19,386;CL:0000048,7.92e-19,427;CL:0000723,4.90e-18,433;CL:0000134,5.54e-18,354;CL:0000034,1.37e-17,441;CL:0002320,5.51e-17,361;CL:0002087,2.17e-14,115;CL:0002031,3.77e-13,120;CL:0000738,1.54e-10,136;CL:0000473,6.16e-10,48;CL:0000234,6.16e-10,48;CL:0002194,4.16e-09,59;CL:0000576,4.16e-09,59;CL:0000040,4.16e-09,59;CL:0000559,4.16e-09,59;CL:0002009,1.50e-08,61;CL:0000860,3.09e-08,42;CL:0002057,3.09e-08,42;CL:0000839,2.51e-07,66;CL:0000838,3.41e-07,52;CL:0000557,4.16e-07,67;CL:0000542,6.16e-07,53;CL:0000051,6.16e-07,53;CL:0002032,8.43e-07,161;CL:0000837,8.43e-07,161;CL:0000766,9.03e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.09e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.33e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.76e-17!375;UBERON:0002204!1.89e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.35e-17,371;UBERON:0000926,3.05e-07,315;UBERON:0004120,3.05e-07,315;UBERON:0006603,3.05e-07,315 | |||
|phase1_expression=1.2717486548939,0.428201047781966,3.94672331468719,0,2.68176656656373,2.61701557230111,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.369363174230364,0.204000691244253,0,0,0,0,1.68109492645493,2.46301768349837,1.73163718890094,0.393364276848904,2.68680578668049,0.309632246632152,0,0.30120591877825,0.739508020333575,0,0,0,1.10799081706375,4.61252229181326,1.08505435357926,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,4.41615170120801,4.11167888021826,3.09706370895104,2.01384674625505,1.0246428261164,2.36482229888585,0,0.645484683583826,0,0.564727018627814,3.27487380069415,3.59557575112135,1.22433556948361,1.60464513538047,0,0.329851300186716,0.598390972864896,0.852449501065388,3.48251086354301,9.07816359505824,3.73693349397345,3.51748131359441,1.0429658368404,3.04064382587163,9.08099253950053,3.31449872388808,3.16462387440884,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0.400395987036012,0,1.32208974556972,0,0,1.76171156811282,0.382273228125229,0,1.68152568894461,0,0,1.57204305099666,0.616804496998528,0,0,0,0,0.557052284425868,1.47302953737419,1.77227115666897,1.08321545506006,1.40900451698243,0.260118695119756,0,0,0,0,0,0,0.793165398882963,1.91610246800961,1.03088233644789,1.26509846009751,0.95569624297229,1.95325036156926,0,0,1.27986611154418,2.49861453104692,0.473554504088034,1.64225599384209,2.01606743224732,5.08136371988664,0.868946423296794,0,0,3.06870148424473,0,1.00267582127178,0.144846518960824,0.795285947051099,2.91980922181582,0,0.221729397462564,0.614843499851882,0.0654895377488563,0,0,4.21911611751088,6.09454080547435,2.92507513141503,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,3.03913227994991,4.10468460520978,1.43418310374407,1.41867352879343,0.560677600142307,3.20246987189115,4.19334832309172,0.311211035399766,3.50247747381189,0.490385709340376,0.151357427644931,0.576175924479999,6.32667865951251,0.312160076830321,0,0.298897361103602,0.352303495931295,0,0.280901613404497,0.816616685019573,0,1.03325781175765,2.37600571456411,1.48360157567134,0.910161361938026,6.46756327634615,0,0,0,0.438977620880838,0.919463387397059,1.80285670687916,3.97012641060074,0,0.427114777637135,0.211931901159562,0.300091096084402,0.618315175430633,0.257640540045629,0.744467425326359,0,0.389748020644795,0.252433774244115,0.736399189138395,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,2.28065813717227,1.03993478527958,0,0,0,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0.246217006087397,6.08411089362018,1.78357394746474,0,0.335964256397719,0.141775097242386,0.626909658919938,0,0,0,0,0,0,0,5.84180627487955,4.96584953225761,7.03304683260282,3.4214489204541,0.308482478109971,0.300343057843917,1.71495859578347,0.112131084345361,0,0,2.84397774667111,0,1.690605505112,1.59562869950922,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0,0,3.01439377059586,2.61460037580088,1.3996218765488,1.2162378064119,0.502257091432126,2.10833939483032,2.87549826589899,1.14861935834114,0,1.30303176000821,0.410952645100767,1.43248770591916,8.40638579951455,0.788123040807709,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,2.28767947683888,2.49800584316026,1.10391690523754,0,0.300946099727719,0,3.10419213877515,1.32845119707087,0.368738337083406,1.12948698808508,0.391602314925481,0.686286847621712,0.413536052245775,0.215714200818617,0.74709290462411,0,0,0,4.21783273291921,1.38115775959256,2.52594084989766,5.38184426873944,1.02341449813341,4.3430558708774,2.96836132889982,0.771048469013278,2.13074070375753,0.410635780069046,0.519254429183621,0.232420756919918,0,0.200506470303285,0,1.49258782613989,1.63882051206045,0,0.451199612907412,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55529752530024,0,0,0,0.574265537996172,0,3.21367859688319,5.51023094265095,0,0,0.275673144969061,0.107420244868274,0.435050081742686,0,1.33548053470106,0.991709492165869,1.53752053892085,0.127612712494584,0.2023155617111,0.464845549297286,0.31481234683064,0,0,4.25844824253617,0,0,1.14499909393593,0.744316738719335,0.632758849437452,0,0.255897791311334,0,0.318203247925937,2.35484592059769,0.719489830333259,0.54907405947211,0.589062011728432,1.81964233415984,1.58510321173008,1.26377536871694,0.975267478179181,1.46228093778771,1.05650146756755,0.409499734223957,0.707027159768564,1.13008116620243,1.10273068709225,1.32687795048244,1.31535265576129,0,0,1.21746226177622,1.239293992399,0.563391205064483,0.143411352204052,0,0.35667105148125,0,3.16661452946496,0.658589785919804,0.75894634753143,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.635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| |||
|short_description=p7@MSC | |||
}} |
Revision as of 22:30, 22 January 2014
Short description: | p7@MSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MSC_5end |
Coexpression cluster: | NA |
Association with transcript: | -339bp_to_ENST00000521739_5end |
EntrezGene: | MSC |
HGNC: | 7321 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 3.01e-19 | 386 |
multi fate stem cell | 7.92e-19 | 427 |
somatic stem cell | 4.90e-18 | 433 |
mesenchymal cell | 5.54e-18 | 354 |
stem cell | 1.37e-17 | 441 |
connective tissue cell | 5.51e-17 | 361 |
nongranular leukocyte | 2.17e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.77e-13 | 120 |
leukocyte | 1.54e-10 | 136 |
defensive cell | 6.16e-10 | 48 |
phagocyte | 6.16e-10 | 48 |
monopoietic cell | 4.16e-09 | 59 |
monocyte | 4.16e-09 | 59 |
monoblast | 4.16e-09 | 59 |
promonocyte | 4.16e-09 | 59 |
macrophage dendritic cell progenitor | 1.50e-08 | 61 |
classical monocyte | 3.09e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.09e-08 | 42 |
myeloid lineage restricted progenitor cell | 2.51e-07 | 66 |
lymphoid lineage restricted progenitor cell | 3.41e-07 | 52 |
granulocyte monocyte progenitor cell | 4.16e-07 | 67 |
lymphocyte | 6.16e-07 | 53 |
common lymphoid progenitor | 6.16e-07 | 53 |
hematopoietic oligopotent progenitor cell | 8.43e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.43e-07 | 161 |
myeloid leukocyte | 9.03e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.35e-17 | 371 |
mesoderm | 3.05e-07 | 315 |
mesoderm-derived structure | 3.05e-07 | 315 |
presumptive mesoderm | 3.05e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.33e-10 | 14 |