FFCP PHASE1:Hg19::chr9:118701850..118701882,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C679 | |||
|description=CAGE_peak_at_chr9:118701850..118701882,+ | |||
|id=chr9:118701850..118701882,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.00e-29!180;CL:0000187!2.25e-26!54;CL:0000680!2.59e-25!57;CL:0000056!2.59e-25!57;CL:0000355!2.59e-25!57;CL:0000183!6.83e-24!59;CL:0000393!3.68e-22!60;CL:0000211!3.68e-22!60;CL:0000192!1.39e-20!42;CL:0000514!1.39e-20!42;CL:0000222!3.83e-16!119;CL:0000057!1.22e-14!75;CL:0000359!1.18e-12!32;CL:0000548!2.97e-11!679;CL:0000004!2.97e-11!679;CL:0000255!2.97e-11!679;CL:0000012!5.76e-11!682;CL:0000144!7.50e-10!625;CL:0000220!3.98e-08!246;CL:0002494!4.05e-08!16;CL:0002321!6.75e-08!248;CL:0002539!1.02e-07!10;CL:0000048!1.13e-07!430;CL:0000723!2.00e-07!436;CL:0002371!2.01e-07!591;CL:0000003!2.10e-07!722;CL:0000077!2.33e-07!19;CL:0002548!4.19e-07!6;CL:0000034!9.24e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000187;8.44e-11;55!CL:0002504;2.26e-09;3!CL:1000279;2.26e-09;3!CL:1000280;2.26e-09;3!CL:0000077;5.36e-09;19!CL:0000192;2.83e-08;43!CL:0002548;3.25e-07;6!CL:0002494;3.51e-07;16!CL:0002195;7.30e-07;2!CL:0002571;7.30e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.04e-16,55;CL:0000680,2.95e-15,58;CL:0000056,2.95e-15,58;CL:0000355,2.95e-15,58;CL:0000393,3.26e-14,61;CL:0000211,3.26e-14,61;CL:0000192,8.65e-13,43;CL:0000514,8.65e-13,43;CL:0000222,1.77e-12,121;CL:0002504,2.37e-09,3;CL:1000279,2.37e-09,3;CL:1000280,2.37e-09,3;CL:0000077,5.88e-09,19;CL:0002548,3.01e-07,6;CL:0002494,3.43e-07,16;CL:0000359,4.96e-07,32;CL:0002195,7.32e-07,2;CL:0002571,7.32e-07,2;CL:0000057,7.68e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;2.83e-08;43!CL:0000355;4.96e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.83e-24!70;UBERON:0000914!3.80e-24!83;UBERON:0002329!3.80e-24!83;UBERON:0003077!3.80e-24!83;UBERON:0003059!3.80e-24!83;UBERON:0007282!3.80e-24!83;UBERON:0009618!3.80e-24!83;UBERON:0007285!3.80e-24!83;UBERON:0001134!1.32e-22!61;UBERON:0002036!1.32e-22!61;UBERON:0003082!1.32e-22!61;UBERON:0002385!2.17e-21!63;UBERON:0001015!2.17e-21!63;UBERON:0000383!2.17e-21!63;UBERON:0000486!3.04e-21!82;UBERON:0005256!7.13e-16!143;UBERON:0000490!2.07e-10!138;UBERON:0004872!1.90e-09!84;UBERON:0002100!2.15e-09!216;UBERON:0001135!4.57e-09!15;UBERON:0003104!2.43e-08!238;UBERON:0009142!2.43e-08!238;UBERON:0004535!3.83e-08!110;UBERON:0004237!1.02e-07!10;UBERON:0004695!1.02e-07!10;UBERON:0002111!1.02e-07!10;UBERON:0004178!1.02e-07!10;UBERON:0001637!1.31e-07!42;UBERON:0003509!1.31e-07!42;UBERON:0004572!1.31e-07!42;UBERON:0001009!1.34e-07!113;UBERON:0002049!3.72e-07!79;UBERON:0007798!3.72e-07!79;UBERON:0000481!3.88e-07!347;UBERON:0004573!6.16e-07!33;UBERON:0004571!6.16e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.69e-08;5!UBERON:0002216;3.69e-08;5!UBERON:0011134;3.69e-08;5!UBERON:0002209;3.69e-08;5!UBERON:0002213;3.69e-08;5!UBERON:0007844;3.69e-08;5!UBERON:0011138;3.69e-08;5!UBERON:0001130;3.69e-08;5!UBERON:0001066;3.69e-08;5!UBERON:0001468;3.69e-08;5!UBERON:0005284;6.09e-08;5!UBERON:0001135;8.36e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,6.45e-14,71;UBERON:0003059,6.45e-14,71;UBERON:0007282,6.45e-14,71;UBERON:0004290,6.45e-14,71;UBERON:0009618,6.45e-14,71;UBERON:0001134,6.89e-14,62;UBERON:0002036,6.89e-14,62;UBERON:0003082,6.89e-14,62;UBERON:0003077,1.23e-13,72;UBERON:0007285,1.23e-13,72;UBERON:0007524,2.32e-13,73;UBERON:0002385,2.86e-13,64;UBERON:0001015,2.86e-13,64;UBERON:0000383,2.86e-13,64;UBERON:0007503,4.24e-12,78;UBERON:0000486,5.38e-11,83;UBERON:0003104,4.24e-09,160;UBERON:0009142,4.24e-09,160;UBERON:0005256,9.87e-09,122;UBERON:0011135,3.99e-08,5;UBERON:0002216,3.99e-08,5;UBERON:0011134,3.99e-08,5;UBERON:0002209,3.99e-08,5;UBERON:0002213,3.99e-08,5;UBERON:0005856,3.99e-08,5;UBERON:0005866,3.99e-08,5;UBERON:0005863,3.99e-08,5;UBERON:0007844,3.99e-08,5;UBERON:0011138,3.99e-08,5;UBERON:0001130,3.99e-08,5;UBERON:0001066,3.99e-08,5;UBERON:0001468,3.99e-08,5;UBERON:0004872,4.57e-08,83;UBERON:0001135,7.17e-08,15;UBERON:0005284,7.31e-08,5;UBERON:0004535,8.89e-08,109;UBERON:0001009,2.06e-07,112;UBERON:0000490,2.52e-07,148 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0.261185628199839,1.47440361900905,0,1.96597234917155,1.84636884759917,2.22779435328084,2.31978163009541,2.6893005858071,3.01347264011988,4.38186054232424,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70700859703636,4.2194645408365,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886413581652058,5.69359477496841,0.860509862246441,0,0.560677600142307,2.1349799145941,0.49333509683432,2.48968828319813,6.87024427555409,3.92308567472301,3.48122083583342,1.15235184896,4.21778577300834,1.87296046098192,0,0.448346041655403,0.23486899728753,0.485618833104395,0.140450806702248,3.0623125688234,0,2.6864703105699,0,0,0,1.43723628363248,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0,3.51639767796065,0,0.85422955527427,0.211931901159562,0,0.412210116953756,0,0.37223371266318,0.337552664482532,0,0,0.460249493211497,0.323292113637624,0,0.201504196455281,0,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,2.78620756819187,0.721879481669586,0.591534000199219,0,0.241011029883482,0.882351781859152,0,0.237270619111097,0.539325232640658,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,2.91665277507493,0,0,0,0.0925884451585296,2.28065813717227,1.03993478527958,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.358234090811393,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.901029173531752,0,0.112131084345361,0,0,0,0,0,0.531876233169741,0,0,0,0,38.3181023003835,0.542621605391443,0,0.325736184293735,32.6960592843142,2.37585561880029,1.50719688529793,4.35766729300147,3.499054691372,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80343624329334,0.500170521059677,1.35632511849868,0.415941723061614,0.713715955188647,0.315404830067869,0,0.300946099727719,0,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,1.66435439510497,0.907170879989041,0.248107807818777,0,0,0.640695746278505,0.511707249066704,0.804269605718038,1.48418066444991,0,0,0,2.07701771673448,0,0,0.200506470303285,0,0.803701137152247,0.728364672026868,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,2.57602529119306,0,0,0.574265537996172,0,0,0.193341436584244,0.770243085573222,1.22802939780904,0.275673144969061,2.79292636657511,1.45016693914229,0.596586391912706,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0.308033580176089,0.532306030317022,0.869932992075073,0.55597265731176,2.86249773483982,0.372158369359667,1.58189712359363,2.09693213316207,0.511795582622668,0.42793898803392,0.318203247925937,0,6.29553601541602,7.13796277313742,8.48249296888942,0.404364963146632,0,0,3.41343617362713,1.21856744815642,0,0.136499911407986,1.27264888758341,0,0,1.32687795048244,0.438450885253763,6.36653087693356,0.655894752046633,3.04365565444056,0.30982349809975,0,0.286822704408103,0.196498082026242,3.5667105148125,0.354761064070598,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.584714536689484,0,0,0.264768380074501,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1110671705139,0,0,4.068296602476,0,0.864221491201268,0,0,0,0.511164065356265,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,0,1.6468607378872,0,0,0.149254802886874,0.467426619694449,0,0,0,0,2.28840068396924,0,0.932623203496683,0.295710299979268,1.11507737014592,0.449803112163605,0,1.65882483136342,0.53168342911599,0,1.05180326298053,1.90402606084398,0.813741466409323,0.181848659202559,2.04080058380728,0,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,3.00218227924896,0.260994291965212,0,1.62065732026684,0.244736704506468,3.04451029838529,0.617602894321944,0.657852148736121,1.06013487567529,4.43702288023104,0,0,1.38172136692479,0,0,0,0,0,0.327609848846413,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,1.63771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,4.61252324845722,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40513409419076,0.62164849248911,0,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,3.52894871715692,0,0,0,0,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| |||
|short_description=p@chr9:118701850..118701882,+ | |||
}} |
Revision as of 03:00, 23 January 2014
Short description: | p@chr9:118701850..118701882, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:118701850..118701882, + |
Coexpression cluster: | C679_Mesenchymal_Smooth_Cardiac_Hair_Fibroblast_Mesothelial_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.04e-16 | 55 |
muscle precursor cell | 2.95e-15 | 58 |
myoblast | 2.95e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.95e-15 | 58 |
electrically responsive cell | 3.26e-14 | 61 |
electrically active cell | 3.26e-14 | 61 |
smooth muscle cell | 8.65e-13 | 43 |
smooth muscle myoblast | 8.65e-13 | 43 |
mesodermal cell | 1.77e-12 | 121 |
enteric smooth muscle cell | 2.37e-09 | 3 |
smooth muscle cell of large intestine | 2.37e-09 | 3 |
smooth muscle cell of colon | 2.37e-09 | 3 |
mesothelial cell | 5.88e-09 | 19 |
cardiac fibroblast | 3.01e-07 | 6 |
cardiocyte | 3.43e-07 | 16 |
vascular associated smooth muscle cell | 4.96e-07 | 32 |
hepatic stem cell | 7.32e-07 | 2 |
hepatic mesenchymal stem cell | 7.32e-07 | 2 |
fibroblast | 7.68e-07 | 76 |