FFCP PHASE1:Hg19::chrX:153363188..153363203,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4204 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6990 | |||
|TSSclassifier=strong | |||
|UniProt=F5H1U8,P51608,Q59FJ6,D3YJ43 | |||
|association_with_transcript=0bp_to_ENST00000545451,NM_001110792,NM_004992,uc004fjv.2,uc004fjw.2_5end | |||
|description=CAGE_peak_2_at_MECP2_5end | |||
|id=chrX:153363188..153363203,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.12e-19!115;UBERON:0001049!1.47e-15!57;UBERON:0005068!1.47e-15!57;UBERON:0006241!1.47e-15!57;UBERON:0007135!1.47e-15!57;UBERON:0003075!1.93e-14!86;UBERON:0007284!1.93e-14!86;UBERON:0002346!2.50e-14!90;UBERON:0000955!3.41e-12!69;UBERON:0006238!3.41e-12!69;UBERON:0002616!4.27e-12!59;UBERON:0002780!6.32e-11!41;UBERON:0001890!6.32e-11!41;UBERON:0006240!6.32e-11!41;UBERON:0003080!7.61e-11!42;UBERON:0005743!1.67e-10!86;UBERON:0001017!3.20e-10!82;UBERON:0002020!6.32e-10!34;UBERON:0003528!6.32e-10!34;UBERON:0000073!7.85e-10!94;UBERON:0001016!7.85e-10!94;UBERON:0001893!1.05e-09!34;UBERON:0003056!2.28e-09!61;UBERON:0002791!2.58e-09!33;UBERON:0001950!4.20e-09!20;UBERON:0001869!5.80e-09!32;UBERON:0002619!6.33e-09!22;UBERON:0000956!3.19e-07!25;UBERON:0000203!3.19e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.48e-09;20!UBERON:0000073;1.04e-08;53!UBERON:0002616;1.04e-08;53!UBERON:0002619;1.28e-08;22!UBERON:0002791;2.86e-08;32!UBERON:0003528;4.48e-08;34!UBERON:0002020;4.48e-08;34!UBERON:0002780;4.94e-08;41!UBERON:0001890;4.94e-08;41!UBERON:0001893;5.74e-08;34!UBERON:0001869;6.95e-08;32!UBERON:0000956;6.48e-07;25!UBERON:0000203;6.48e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.79e-18,114;UBERON:0001049,2.81e-16,56;UBERON:0005068,2.81e-16,56;UBERON:0006241,2.81e-16,56;UBERON:0007135,2.81e-16,56;UBERON:0000073,6.34e-15,53;UBERON:0002616,6.34e-15,53;UBERON:0003075,7.74e-14,82;UBERON:0007284,7.74e-14,82;UBERON:0002346,1.43e-13,86;UBERON:0000955,6.65e-13,68;UBERON:0006238,6.65e-13,68;UBERON:0002780,2.71e-11,41;UBERON:0001890,2.71e-11,41;UBERON:0003080,2.71e-11,41;UBERON:0006240,2.71e-11,41;UBERON:0001017,9.79e-11,81;UBERON:0003056,2.85e-10,61;UBERON:0003528,2.99e-10,34;UBERON:0002020,2.99e-10,34;UBERON:0001016,4.15e-10,89;UBERON:0001893,5.08e-10,34;UBERON:0001950,2.29e-09,20;UBERON:0002791,2.88e-09,32;UBERON:0001869,3.07e-09,32;UBERON:0002619,5.07e-09,22;UBERON:0010371,1.36e-08,104;UBERON:0010314,2.58e-07,132;UBERON:0000956,3.74e-07,25;UBERON:0000203,3.74e-07,25 | |||
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| |||
|short_description=p2@MECP2 | |||
}} |
Revision as of 07:30, 23 January 2014
Short description: | p2@MECP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MECP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545451, NM_001110792, NM_004992, uc004fjv.2, uc004fjw.2_5end |
EntrezGene: | MECP2 |
HGNC: | 6990 |
UniProt: | F5H1U8P51608Q59FJ6D3YJ43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.79e-18 | 114 |
neural tube | 2.81e-16 | 56 |
neural rod | 2.81e-16 | 56 |
future spinal cord | 2.81e-16 | 56 |
neural keel | 2.81e-16 | 56 |
regional part of nervous system | 6.34e-15 | 53 |
regional part of brain | 6.34e-15 | 53 |
neural plate | 7.74e-14 | 82 |
presumptive neural plate | 7.74e-14 | 82 |
neurectoderm | 1.43e-13 | 86 |
brain | 6.65e-13 | 68 |
future brain | 6.65e-13 | 68 |
regional part of forebrain | 2.71e-11 | 41 |
forebrain | 2.71e-11 | 41 |
anterior neural tube | 2.71e-11 | 41 |
future forebrain | 2.71e-11 | 41 |
central nervous system | 9.79e-11 | 81 |
pre-chordal neural plate | 2.85e-10 | 61 |
brain grey matter | 2.99e-10 | 34 |
gray matter | 2.99e-10 | 34 |
nervous system | 4.15e-10 | 89 |
telencephalon | 5.08e-10 | 34 |
neocortex | 2.29e-09 | 20 |
regional part of telencephalon | 2.88e-09 | 32 |
cerebral hemisphere | 3.07e-09 | 32 |
regional part of cerebral cortex | 5.07e-09 | 22 |
ecto-epithelium | 1.36e-08 | 104 |
structure with developmental contribution from neural crest | 2.58e-07 | 132 |
cerebral cortex | 3.74e-07 | 25 |
pallium | 3.74e-07 | 25 |