UBERON:0011138: Difference between revisions
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|located_in= | |located_in= | ||
|name=post-cranial axial skeletal system | |name=post-cranial axial skeletal system | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:10, 12 September 2014
| Name: | post-cranial axial skeletal system |
|---|---|
| Namespace: | FANTOM |
| Definition: | "Subdivision of the skeletal system which consists of the post-cranial axial skeleton plus associated joints." [UBERON:cjm] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000075(subdivision of skeletal system),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0003089(sclerotome) |
Children
| part of: | UBERON:0001130 (vertebral column) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11462-119B4 (Nucleus Pulposus Cell, donor3)
- 11463-119B5 (Anulus Pulposus Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011138 (post-cranial axial skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.25e-162 | FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_2237df1fa30e2f7a33dc802947271347 | p@chr3:174737010..174737023, + |
| 1.25e-162 | FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_2237df1fa30e2f7a33dc802947271347 | p@chr3:174737010..174737023, + |
| 3.92e-140 | FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_c293c649fe1f941fcc6058b8b5b50d3e | p4@PAX1 |
| 3.92e-140 | FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_c293c649fe1f941fcc6058b8b5b50d3e | p4@PAX1 |
| 4.22e-99 | FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_a211966bb47e79055211cdbf48c47b62 | p@chr5:30104176..30104187, - |
| 4.22e-99 | FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_a211966bb47e79055211cdbf48c47b62 | p@chr5:30104176..30104187, - |
| 1.06e-78 | FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_9bd518b1fd11655cf3eeb79f6e37ff0b | p4@NKX3-2 |
| 1.06e-78 | FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_9bd518b1fd11655cf3eeb79f6e37ff0b | p4@NKX3-2 |
| 2.52e-71 | FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_e8acef4d97a2f1e55c7c5f4a40c257da | p@chr9:114135497..114135526, - |
| 2.52e-71 | FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_e8acef4d97a2f1e55c7c5f4a40c257da | p@chr9:114135497..114135526, - |
| 7.4e-71 | FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_7103be10a3af1530616665a6cf269fa6 | p@chr2:241897125..241897142, - |
| 7.4e-71 | FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_7103be10a3af1530616665a6cf269fa6 | p@chr2:241897125..241897142, - |
| 6.33e-70 | FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_f61a24b5d0c7fafacf45dd2e10bb81cd | p@chr3:80727046..80727051, - |
| 6.33e-70 | FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_f61a24b5d0c7fafacf45dd2e10bb81cd | p@chr3:80727046..80727051, - |
| 4.8e-67 | FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_3ef8bcc1dadd88f7723083c339ca7580 | p15@SNED1 |
| 4.8e-67 | FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_3ef8bcc1dadd88f7723083c339ca7580 | p15@SNED1 |
| 1.24e-66 | FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_3d52b732f88ad13861f8be996dce60ef | p20@CAPZB |
| 1.24e-66 | FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_3d52b732f88ad13861f8be996dce60ef | p20@CAPZB |
| 1.26e-62 | FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_71b77ca27291c5bd44029df50704243b | p@chr1:19778678..19778689, - |
| 1.26e-62 | FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_71b77ca27291c5bd44029df50704243b | p@chr1:19778678..19778689, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_a65d8d0a6c107e2b627c4b2efd36f370 | p@chr2:241897189..241897221, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_a65d8d0a6c107e2b627c4b2efd36f370 | p@chr2:241897189..241897221, - |
| 1.55e-57 | FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_1dd4dcfd7e66191dfe830efc77e50c23 | p1@uc010aki.1 |
| 1.55e-57 | FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_1dd4dcfd7e66191dfe830efc77e50c23 | p1@uc010aki.1 |
| 4.09e-56 | FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_8bc28389675d674854ebad5ffd3f4262 | p6@SIX4 |
| 4.09e-56 | FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_8bc28389675d674854ebad5ffd3f4262 | p6@SIX4 |
| 3.74e-53 | FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_7c41cc40e0e27e1706b14744ddf8b879 | p3@uc010aki.1 |
| 3.74e-53 | FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_7c41cc40e0e27e1706b14744ddf8b879 | p3@uc010aki.1 |
| 1.15e-51 | FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_f58b03bb365b2f6f3ab4dfa4e1116a75 | p3@PAX1 |
| 1.15e-51 | FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_f58b03bb365b2f6f3ab4dfa4e1116a75 | p3@PAX1 |
| 2.3e-51 | FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_c39ced56fc4b5aa292fb72bedfaab738 | p@chr10:81923378..81923389, - |
| 2.3e-51 | FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_c39ced56fc4b5aa292fb72bedfaab738 | p@chr10:81923378..81923389, - |
| 3.24e-51 | FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_8a432027e10b985f0a0d84ab2437aea9 | p@chr2:12248310..12248334, - |
| 3.24e-51 | FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_8a432027e10b985f0a0d84ab2437aea9 | p@chr2:12248310..12248334, - |
| 8.0e-51 | FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_f38e5fa95ab0ab12815bea119fbec475 | p19@HDAC9 |
| 8.0e-51 | FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_f38e5fa95ab0ab12815bea119fbec475 | p19@HDAC9 |
| 5.06e-49 | FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_8205bd6b8698e0a0a1aa91ce5a0a99a9 | p@chr7:158224707..158224729, - |
| 5.06e-49 | FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_8205bd6b8698e0a0a1aa91ce5a0a99a9 | p@chr7:158224707..158224729, - |
| 5.24e-48 | FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_a16dae00f9f3226ce5b7201fc72fdd18 | p@chr1:65888177..65888194, + |
| 5.24e-48 | FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_a16dae00f9f3226ce5b7201fc72fdd18 | p@chr1:65888177..65888194, + |
| 2.98e-45 | FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_26c9a0d241ef709c79f154486c2e51a6 | p3@NKX3-2 |
| 2.98e-45 | FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_26c9a0d241ef709c79f154486c2e51a6 | p3@NKX3-2 |
| 2.92e-44 | FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_ba24b98af51f88f299bd5bff7cf3c0c1 | p1@MGC27382 |
| 2.92e-44 | FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_ba24b98af51f88f299bd5bff7cf3c0c1 | p1@MGC27382 |
| 1.71e-43 | FFCP PHASE1:Hg19::chr7:18832834..18832859,+#_1f22cd6689fb69d7ae49185eb061e367 | p18@HDAC9 |
| 1.71e-43 | FFCP PHASE2:Hg19::chr7:18832834..18832859,+#_1f22cd6689fb69d7ae49185eb061e367 | p18@HDAC9 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_8cdaee21682ba1cfa0c4114fe3ea74d1 | p@chr13:24914614..24914622, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr9:33028063..33028067,-#_8cdaee21682ba1cfa0c4114fe3ea74d1 | p@chr9:33028063..33028067, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr9:33028063..33028067,-#_8cdaee21682ba1cfa0c4114fe3ea74d1 | p@chr9:33028063..33028067, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_8cdaee21682ba1cfa0c4114fe3ea74d1 | p@chr13:24914614..24914622, - |
| 1.64e-40 | FFCP PHASE2:Hg19::chr20:21686317..21686350,+#_fbf91faa54bcd180d4a5928509bd74e7 | p1@PAX1 |
| 1.64e-40 | FFCP PHASE1:Hg19::chr20:21686317..21686350,+#_fbf91faa54bcd180d4a5928509bd74e7 | p1@PAX1 |
| 1.81e-40 | FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_09d0383d767baf66251ebc725820f856 | p5@PTGFR |
| 1.81e-40 | FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_09d0383d767baf66251ebc725820f856 | p5@PTGFR |
| 2.13e-40 | FFCP PHASE1:Hg19::chr2:241897363..241897398,+#_721a9981cb6c7fe4cf1a3a715aeed0de | p@chr2:241897363..241897398, + |
| 2.13e-40 | FFCP PHASE2:Hg19::chr2:241897363..241897398,+#_721a9981cb6c7fe4cf1a3a715aeed0de | p@chr2:241897363..241897398, + |
| 3.04e-39 | FFCP PHASE2:Hg19::chr20:21686290..21686311,+#_74eb04b316db19d4ffb9ec0701733a67 | p2@PAX1 |
| 3.04e-39 | FFCP PHASE1:Hg19::chr20:21686290..21686311,+#_74eb04b316db19d4ffb9ec0701733a67 | p2@PAX1 |
| 7.19e-39 | FFCP PHASE1:Hg19::chr7:18832759..18832786,+#_e85db1664c41c179b8558246f064b81c | p16@HDAC9 |
| 7.19e-39 | FFCP PHASE2:Hg19::chr7:18832759..18832786,+#_e85db1664c41c179b8558246f064b81c | p16@HDAC9 |
| 7.19e-39 | FFCP PHASE2:Hg19::chr5:140887761..140887777,+#_e85db1664c41c179b8558246f064b81c | p@chr5:140887761..140887777, + |
| 7.19e-39 | FFCP PHASE1:Hg19::chr5:140887761..140887777,+#_e85db1664c41c179b8558246f064b81c | p@chr5:140887761..140887777, + |
| 1.24e-38 | FFCP PHASE2:Hg19::chr4:77068930..77068959,-#_ca65f54bf689a118f2155812e7776b6c | p4@NUP54 |
| 1.24e-38 | FFCP PHASE1:Hg19::chr4:77068930..77068959,-#_ca65f54bf689a118f2155812e7776b6c | p4@NUP54 |
| 2.08e-38 | FFCP PHASE1:Hg19::chr2:241938405..241938416,+#_2728f965e2e444c2816eb7f49650476b | p@chr2:241938405..241938416, + |
| 2.08e-38 | FFCP PHASE2:Hg19::chr2:241938405..241938416,+#_2728f965e2e444c2816eb7f49650476b | p@chr2:241938405..241938416, + |
| 3.34e-38 | FFCP PHASE2:Hg19::chr4:13546632..13546662,-#_21901a9073e07353c9db49961d3d9992 | p1@NKX3-2 |
| 3.34e-38 | FFCP PHASE1:Hg19::chr4:13546632..13546662,-#_21901a9073e07353c9db49961d3d9992 | p1@NKX3-2 |
| 3.68e-38 | FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_a3bb596eb0d5e29936caa9362bd93251 | p10@SYNJ2 |
| 3.68e-38 | FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_a3bb596eb0d5e29936caa9362bd93251 | p10@SYNJ2 |
| 5.39e-38 | FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_fe0139bd70a19ea157ac6431a3b9f3e7 | p@chr9:16138889..16138902, - |
| 5.39e-38 | FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_fe0139bd70a19ea157ac6431a3b9f3e7 | p@chr9:16138889..16138902, - |
| 8.66e-38 | FFCP PHASE2:Hg19::chr8:78311303..78311320,+#_a7ba66261c2198529923ec9a8dab57e7 | p2@ENST00000518706 |
| 8.66e-38 | FFCP PHASE1:Hg19::chr8:78311303..78311320,+#_a7ba66261c2198529923ec9a8dab57e7 | p2@ENST00000518706 |
| 2.96e-37 | FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_88c934837f2e358b838a671620205125 | p1@ENST00000436845 |
| 2.96e-37 | FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_88c934837f2e358b838a671620205125 | p1@ENST00000436845 |
| 6.92e-37 | FFCP PHASE2:Hg19::chr9:123239747..123239765,-#_425b81d087f606b967612d559f3a59bc | p12@CDK5RAP2 |
| 6.92e-37 | FFCP PHASE1:Hg19::chr9:123239747..123239765,-#_425b81d087f606b967612d559f3a59bc | p12@CDK5RAP2 |
| 3.28e-36 | FFCP PHASE1:Hg19::chr1:78695298..78695311,+#_36363a89be139d7059ae9a0302146ca2 | p1@ENST00000413519 |
| 3.28e-36 | FFCP PHASE2:Hg19::chr1:78695298..78695311,+#_36363a89be139d7059ae9a0302146ca2 | p1@ENST00000413519 |
| 9.62e-35 | FFCP PHASE2:Hg19::chr14:37126814..37126834,+#_4c7c3ef72b27fcfce396b55aacdaa695 | p4@PAX9 |
| 9.62e-35 | FFCP PHASE1:Hg19::chr14:37126814..37126834,+#_4c7c3ef72b27fcfce396b55aacdaa695 | p4@PAX9 |
| 1.8e-34 | FFCP PHASE1:Hg19::chr7:100202784..100202796,-#_efb768412a4d4ac2c8d57d0be47cbef0 | p@chr7:100202784..100202796, - |
| 1.8e-34 | FFCP PHASE2:Hg19::chr7:100202784..100202796,-#_efb768412a4d4ac2c8d57d0be47cbef0 | p@chr7:100202784..100202796, - |
| 3.69e-34 | FFCP PHASE2:Hg19::chr12:54422268..54422278,+#_40cf8a64c1a6b09549c4219c29eb615d | p8@HOXC6 |
| 3.69e-34 | FFCP PHASE1:Hg19::chr12:54422268..54422278,+#_40cf8a64c1a6b09549c4219c29eb615d | p8@HOXC6 |
| 5.52e-34 | FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_e9ae3bfb794e3a71a4d9e4eb7987aa5a | p6@CCDC86 |
| 5.52e-34 | FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_e9ae3bfb794e3a71a4d9e4eb7987aa5a | p6@CCDC86 |
| 1.43e-33 | FFCP PHASE2:Hg19::chr20:21695435..21695452,+#_5be674b8f22859c3acb1118097c7ff73 | p@chr20:21695435..21695452, + |
| 1.43e-33 | FFCP PHASE1:Hg19::chr20:21695435..21695452,+#_5be674b8f22859c3acb1118097c7ff73 | p@chr20:21695435..21695452, + |
| 5.36e-33 | FFCP PHASE2:Hg19::chr16:70795228..70795237,+#_c51b4d78b5bd13a355ffef5a37d6a048 | p@chr16:70795228..70795237, + |
| 5.36e-33 | FFCP PHASE1:Hg19::chr16:70795228..70795237,+#_c51b4d78b5bd13a355ffef5a37d6a048 | p@chr16:70795228..70795237, + |
| 1.05e-32 | FFCP PHASE1:Hg19::chr3:158384350..158384362,-#_fdecd44501811afc913f1e4e8ecdc481 | p@chr3:158384350..158384362, - |
| 1.05e-32 | FFCP PHASE2:Hg19::chr3:158384350..158384362,-#_fdecd44501811afc913f1e4e8ecdc481 | p@chr3:158384350..158384362, - |
| 1.7e-32 | FFCP PHASE2:Hg19::chr2:158345440..158345449,-#_c47ffa629f661b30191f33447f97e597 | p9@CYTIP |
| 1.7e-32 | FFCP PHASE1:Hg19::chr2:158345440..158345449,-#_c47ffa629f661b30191f33447f97e597 | p9@CYTIP |
| 2.34e-32 | FFCP PHASE2:Hg19::chr18:12012068..12012098,+#_e5df790a74162d69418eda4accd40bcb | p@chr18:12012068..12012098, + |
| 2.34e-32 | FFCP PHASE1:Hg19::chr18:12012068..12012098,+#_e5df790a74162d69418eda4accd40bcb | p@chr18:12012068..12012098, + |
| 2.79e-31 | FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_c480b52cfa846b8088ce320854c4e442 | p1@ENST00000555639 |
| 2.79e-31 | FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_c480b52cfa846b8088ce320854c4e442 | p1@ENST00000555639 |
