FFCP PHASE1:Mm9::chr7:112789297..112789323,+: Difference between revisions
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{{FFCP|EntrezGene=14356|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=21bp_to_uc009iyw.1_5end|description=CAGE_peak_3_at_Fxc1_5end|id=chr7:112789297..112789323,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,3.52e-13,7;CL:0002092,3.59e-12,3;CL:0002540,3.59e-12,3;CL:0002476,7.47e-09,2;CL:0000049,9.48e-09,19;CL:0002320,6.61e-08,46;CL:0000134,6.61e-08,46;CL:0000763,8.24e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.08e-13,3;DOID:4045,8.08e-13,3;DOID:0050686,1.15e-10,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-14,16;UBERON:0002204,1.18e-12,32;UBERON:0001474,7.02e-10,22;UBERON:0004765,7.02e-10,22;UBERON:0001434,7.02e-10,22;UBERON:0002384,6.61e-08,46|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.315462165358238,0.959801035240171,0,0.17008658030214,0.297872853602656,0.783599367416806,0.47997726838022,0.45881856213434,1.14846392823004,0.430761996159075,0.215471232685889,0.190023419456374,0,1.55211357458713,1.27006134691926,0,0,0,0,0.204169356262369,27.204555997899,27.346737058333,17.7998072951091,35.2938892818609,34.8353197328807,22.3334762394331,0,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.771778308107841,0,0,0,0,0,0,0,7.64914759689189,6.92206453796882,7.104801149461,0.599200221036809,0.384218305321555,0,0.405017814995072,0,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0,0,0.539703191637817,1.29955283489534,0,0.561777680527007,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.776813650941515,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0.479260498023681,2.99951365496704,0.508280908292259,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,1.36847667671102,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0,0.776110112217047,0,0,0,0,0,0,0,0,2.1066395619397,1.02939162845886,1.70498099637356,0,0.234526059981096,0.180062061461015,0,0.787056926989615,0.154267112887378,0,0,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0,0,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0,0,0,0.166845105716094,0,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.648540907100142,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,9.04747703635634,15.2293591469239,0.491764273019036,0.275936746304732,0,0.234423373184406,0,0,0.631016438832513,0.780877488593277,0.430846795465598,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,0,1.19609616558497,0.619160603889667,2.40752885580625,0.941842285023455,0.410082683163076,0.457556346413045,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0,0.216010681643603,0.836353184057875,0,0.269728692769641,0.247960367176008,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0.228620419965,0,0,0,0.233753804363138,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,0.564751842617067,0,0.572895513439397,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.50695859978048,0,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0,0.282328141245992,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0.818462086339379,0.464810523557898,0.192906610981141,0,0,0.859484216193193,0.382576664137687,0.220591419119515,0.927471342481686|short_description=p3@Fxc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14356 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=21bp_to_uc009iyw.1_5end | |||
|cluster_id=chr7:112789297..112789323,+ | |||
|description=CAGE_peak_3_at_Fxc1_5end | |||
|id=chr7:112789297..112789323,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.52e-13,7;CL:0002092,3.59e-12,3;CL:0002540,3.59e-12,3;CL:0002476,7.47e-09,2;CL:0000049,9.48e-09,19;CL:0002320,6.61e-08,46;CL:0000134,6.61e-08,46;CL:0000763,8.24e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.08e-13,3;DOID:4045,8.08e-13,3;DOID:0050686,1.15e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-14,16;UBERON:0002204,1.18e-12,32;UBERON:0001474,7.02e-10,22;UBERON:0004765,7.02e-10,22;UBERON:0001434,7.02e-10,22;UBERON:0002384,6.61e-08,46 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.315462165358238,0.959801035240171,0,0.17008658030214,0.297872853602656,0.783599367416806,0.47997726838022,0.45881856213434,1.14846392823004,0.430761996159075,0.215471232685889,0.190023419456374,0,1.55211357458713,1.27006134691926,0,0,0,0,0.204169356262369,27.204555997899,27.346737058333,17.7998072951091,35.2938892818609,34.8353197328807,22.3334762394331,0,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.771778308107841,0,0,0,0,0,0,0,7.64914759689189,6.92206453796882,7.104801149461,0.599200221036809,0.384218305321555,0,0.405017814995072,0,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0,0,0.539703191637817,1.29955283489534,0,0.561777680527007,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.776813650941515,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0.479260498023681,2.99951365496704,0.508280908292259,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,1.36847667671102,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0,0.776110112217047,0,0,0,0,0,0,0,0,2.1066395619397,1.02939162845886,1.70498099637356,0,0.234526059981096,0.180062061461015,0,0.787056926989615,0.154267112887378,0,0,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0,0,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0,0,0,0.166845105716094,0,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.648540907100142,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,9.04747703635634,15.2293591469239,0.491764273019036,0.275936746304732,0,0.234423373184406,0,0,0.631016438832513,0.780877488593277,0.430846795465598,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,0,1.19609616558497,0.619160603889667,2.40752885580625,0.941842285023455,0.410082683163076,0.457556346413045,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0,0.216010681643603,0.836353184057875,0,0.269728692769641,0.247960367176008,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0.228620419965,0,0,0,0.233753804363138,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,0.564751842617067,0,0.572895513439397,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.50695859978048,0,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0,0.282328141245992,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0.818462086339379,0.464810523557898,0.192906610981141,0,0,0.859484216193193,0.382576664137687,0.220591419119515,0.927471342481686 | |||
|short_description=p3@Fxc1 | |||
}} |
Revision as of 00:01, 4 August 2015
Short description: | p3@Fxc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fxc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 21bp_to_uc009iyw.1_5end |
EntrezGene: | 14356 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.52e-13 | 7 |
bone marrow cell | 3.59e-12 | 3 |
mesenchymal stem cell of the bone marrow | 3.59e-12 | 3 |
bone marrow macrophage | 7.47e-09 | 2 |
common myeloid progenitor | 9.48e-09 | 19 |
connective tissue cell | 6.61e-08 | 46 |
mesenchymal cell | 6.61e-08 | 46 |
myeloid cell | 8.24e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.23e-14 | 16 |
musculoskeletal system | 1.18e-12 | 32 |
bone element | 7.02e-10 | 22 |
skeletal element | 7.02e-10 | 22 |
skeletal system | 7.02e-10 | 22 |
connective tissue | 6.61e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.08e-13 | 3 |
muscle cancer | 8.08e-13 | 3 |
organ system cancer | 1.15e-10 | 6 |