FFCP PHASE1:Mm9::chr16:78576894..78576911,-: Difference between revisions
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{{FFCP|EntrezGene=67102|HGNC=|MCL_coexpression_id=267|UniProt=Q9D7G4|association_with_transcript=0bp_to_ENSMUST00000114218,ENSMUST00000114219,ENSMUST00000114220,uc007zsr.2_5end|description=CAGE_peak_1_at_D16Ertd472e_5end|id=chr16:78576894..78576911,-|ontology_enrichment_celltype=CL:0000838!1.15e-08!12;CL:0000542!1.48e-08!13;CL:0000051!1.48e-08!13;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000791!2.08e-07!9;CL:0000789!2.08e-07!9;CL:0002420!2.08e-07!9;CL:0002419!2.08e-07!9;CL:0000790!2.08e-07!9;CL:0000988!3.75e-07!32;CL:0002032!3.75e-07!32;CL:0000037!3.75e-07!32;CL:0000566!3.75e-07!32;CL:0000837!3.75e-07!32|ontology_enrichment_celltype_v019_2=CL:0000838,1.15e-08,12;CL:0000542,1.47e-08,13;CL:0000051,1.47e-08,13;CL:0000084,3.61e-08,11;CL:0000827,3.61e-08,11;CL:0000791,2.07e-07,9;CL:0000789,2.07e-07,9;CL:0002420,2.07e-07,9;CL:0002419,2.07e-07,9;CL:0000790,2.07e-07,9;CL:0000988,3.44e-07,32;CL:0002032,3.44e-07,32;CL:0000037,3.44e-07,32;CL:0000837,3.44e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!7.66e-14!41;UBERON:0006562!4.03e-13!24;UBERON:0001557!4.03e-13!24;UBERON:0001042!4.03e-13!24;UBERON:0008814!4.03e-13!24;UBERON:0009145!4.03e-13!24;UBERON:0001004!8.90e-13!42;UBERON:0002370!1.08e-12!23;UBERON:0000974!1.08e-12!23;UBERON:0004807!1.08e-12!23;UBERON:0005058!1.08e-12!23;UBERON:0003351!1.08e-12!23;UBERON:0009113!1.08e-12!23;UBERON:0003295!1.08e-12!23;UBERON:0009722!1.08e-12!23;UBERON:0005562!1.08e-12!23;UBERON:0007690!1.08e-12!23;UBERON:0000072!2.85e-12!27;UBERON:0003408!2.78e-11!24;UBERON:0004177!3.26e-11!29;UBERON:0002368!2.19e-09!60;UBERON:0005057!3.68e-09!51;UBERON:0002530!9.00e-09!65;UBERON:0000063!1.43e-08!35;UBERON:0002390!3.42e-08!45;UBERON:0003061!3.42e-08!45;UBERON:0002193!6.70e-08!48;UBERON:0002405!1.46e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.59e-14,41;UBERON:0006562,3.99e-13,24;UBERON:0001557,3.99e-13,24;UBERON:0001042,3.99e-13,24;UBERON:0008814,3.99e-13,24;UBERON:0009145,3.99e-13,24;UBERON:0001004,9.30e-13,42;UBERON:0002370,1.08e-12,23;UBERON:0000974,1.08e-12,23;UBERON:0004807,1.08e-12,23;UBERON:0005058,1.08e-12,23;UBERON:0003351,1.08e-12,23;UBERON:0009113,1.08e-12,23;UBERON:0003295,1.08e-12,23;UBERON:0009722,1.08e-12,23;UBERON:0005562,1.08e-12,23;UBERON:0007690,1.08e-12,23;UBERON:0000072,2.83e-12,27;UBERON:0000077,4.68e-12,35;UBERON:0003408,2.94e-11,24;UBERON:0004177,3.23e-11,29;UBERON:0005057,3.23e-11,29;UBERON:0000153,1.66e-09,43;UBERON:0001041,1.71e-09,80;UBERON:0002368,2.03e-09,60;UBERON:0002530,8.67e-09,65;UBERON:0007811,1.33e-08,36;UBERON:0002390,3.33e-08,45;UBERON:0003061,3.33e-08,45;UBERON:0002193,6.55e-08,48;UBERON:0002405,6.55e-08,48|phase1_expression=5.76535849577258,0.697950815278722,0.454999239389536,0,0,0.671517087647559,1.63528848416868,38.8661203559145,115.305963442215,122.649811792725,28.0797467889828,24.0911920165916,34.4113467161724,36.8039894183979,6.32908547449759,8.90891176515234,4.19737126876888,14.5112596064789,13.8485577941796,14.8536378129311,4.5072943780067,9.4326403640841,12.27639008953,2.23989391910769,3.21172993494038,0,0,0.215471232685889,0.760093677825496,2.26827116783938,1.33038306393183,4.44521471421742,1.84519436275371,0,0.577703239502549,1.82858109894342,0.408338712524738,16.3227335987394,12.5013655123808,14.1351410872926,33.5291948177678,39.6166381275899,23.3044969454954,2.64383317748712,2.73717714292689,1.65192076945513,3.12956537739216,1.52617609466313,1.5378032791413,1.55543919259427,2.79972843250725,0,19.1272170905819,56.5782470768849,70.5796978199174,4.88792928468299,3.43840127926508,4.12537673821954,2.02316460859598,0.528990979272033,1.90149421051854,4.40497891689872,1.77858959222228,0.449949858640699,0,0.7104801149461,0.599200221036809,0.384218305321555,2.7996195323289,2.97013064329719,2.3135745748652,0.571301968807607,1.76694832761291,3.30725157880376,3.25874601462004,1.83843757322004,1.10115880999389,6.63974158042976,6.29786786350598,1.84640802822271,2.56165402086747,5.2091337055676,5.30447698102624,5.06486349028512,8.70950012327818,2.94628585473668,1.85083185038834,2.23679334990361,5.52801211332244,1.51143120213571,10.4351215932604,7.74381489283248,54.39770669662,5.93673510801599,6.49776417447669,5.37632264516803,4.21333260395256,4.09032774187339,3.63700406444016,2.82671659608272,1.12674735821344,10.2661181931454,17.8363667794652,7.11066703153331,4.5463118612355,5.32055717497707,3.53867111510348,7.4219521817389,17.3488382043605,6.67989625791711,4.8575891494518,5.78484408793068,7.37969591219387,6.93324146542064,7.76085467095652,4.77533047052767,1.23597483867187,6.07317299063629,9.73071607144862,4.52947179852746,4.85851340612866,5.81850303762267,1.86391761218122,2.34224637609238,2.09446706813455,2.29911349687732,33.6680499861636,22.1964010467561,23.8892026897362,4.19413790333504,4.57500602818627,0.753926112677186,1.73824320192276,1.53429274398198,4.57133698031032,2.27137768294861,2.34230536855727,7.71323217782577,1.0108910337347,8.83855794723191,4.55421550369463,3.90833577536904,2.70093194708024,3.16480117455002,3.53789795586905,2.8185018462667,2.34254311399322,11.3829483125167,5.6047678162539,8.88798576788751,5.63043597324636,4.60311038097907,4.72680323683516,6.96504333044333,5.76189981942242,3.58261680273288,22.4708219940235,22.1319200118655,24.438060948021,1.44988040774851,2.57978665979206,2.52086886045421,4.26140524053378,3.14822770795846,2.77680803197281,2.32533944750408,2.14618721119695,1.5179494507732,1.15191894939436,2.29834449710733,3.24275238183423,2.04679982395465,3.07370161407471,2.81833479396781,4.41608891984667,1.44066457330998,1.98251269790279,1.32225283331772,5.54549451391608,3.94802342162745,2.70621668776396,2.42020229548011,2.66853652613844,1.52180500890047,4.2707615539006,1.81168850196412,2.01068167040216,1.39269530428806,1.9496408711912,0.898819408654221,0.432276099749388,2.19055400579804,3.79335801906163,3.65595240351132,1.1270773567308,3.25842124552503,2.32742984601151,2.24434623649019,2.90888070771584,1.03327103585722,0.784993639206874,1.72756029490521,5.33614728756868,2.8363667971736,3.93117990226406,2.9232074610031,1.62288097110802,3.37648023653384,3.31013607315846,4.02774592431135,6.97181475132652,3.0201755450689,0,3.72140947668503,4.36852742360385,4.2938409251009,5.9201146462231,7.23665282045051,7.39012760666419,7.01118223550794,5.0519142697028,2.37643120085263,4.22442446919304,7.70528784232352,5.71304738126433,7.02481132288076,7.88175720530955,5.97954662051692,8.6105575075043,6.39066927391378,6.56202931090403,6.36455857758651,1.50791283939272,1.63171705145613,2.45882136509518,3.86311444826625,8.66973185934077,6.56385444916338,2.29508923527346,2.01976741763498,4.10160685241134,3.51394869866975,2.15423397732799,2.86762557543062,3.7875774594007,4.24614796183249,2.42886421004937,2.33804686329049,3.16230222357219,3.85585579706168,7.2389443456217,3.20518086601059,3.25773918707152,4.61916344323099,1.32745138339963,1.94224508923985,1.81394134178851,1.69744571780308,1.77181135728464,2.45948118355142,1.80899805217755,2.18120237686503,1.06949213515416,2.21225730555071,3.16255825724996,1.03135543248187,9.19186935535228,3.42116078659489,1.68166288917581,3.21505552547388,4.61084607469911,3.21063871683727,4.60737257685939,2.43571959291679,4.69343416127421,5.71946591332314,6.17479514553893,15.1695352706162,10.0107944551461,11.8213332859185,8.71418111222896,7.71462228801788,2.33184669303881,9.27126510052548,5.98048082792484,3.30218988741156,3.88908507476395,3.01389531207506,4.78429797023588,6.40578884978263,27.3665272290107,32.0488825821177,23.6321955205565,0.954670618015114,6.16855187483214,4.47302827679067,3.99619761040665,3.55450103224597,4.14888871117737,4.5853877770839,3.63675205191478,4.4498510137285,1.29614973291793,0.621339313086926,7.89170114157866,4.33597983527538,3.97100377097034,2.72231663681667,2.84151611651008,1.520605129417,2.93393096614385,2.604087696879,3.25063967719704,1.69108884578204,5.18454011264158,20.8567339614598,3.64905387522296,8.11416561602135,13.6416864126685,18.2607229580831,23.0470371546267,20.4332264183947,19.7903966413933,22.9193841382295,18.74687443713,23.5933273220207,27.6780381300897,26.8431038176519,29.5698562519369,10.6563280299149,2.66383144048878,6.54911153249173,4.02923079273788,5.40930863290133,5.44279178808428,3.47988086107804,6.85978813053011,8.52672576860118,2.82375921308533,1.38097570952153,2.29158205375759,1.3748254587495,2.05524755931193,3.0215755895588,1.35004500046361,1.80128481289688,4.07828168085784,2.07104124700728,4.25528125095124,2.79317411380722,4.43907374960749,5.10524105843418,3.77303692730368,4.77993121970037,4.66718128383392,4.32673620201678,5.13470735346904,5.55933865880354,5.32306529769503,4.14977951049368,5.99305647807247,6.40251524048693,6.60507892989553,6.66811167796303,6.14186927507734,3.8581844092741,7.82963211526283,7.94874168725746,4.4573002810104,5.14679837862079,6.67621331852499,5.37781741539616,6.86998477031913,4.65380343404221,4.024415403201,7.10288220882176,5.83957689537206,6.17256498823512,5.33857581558784,5.81176446015824,5.72923460437565,5.57772628269478,5.5942917184531,3.49734809113124,5.14649538579898,7.30561583764214,5.35607329792761,4.85301122062934,4.86922454802885|short_description=p1@D16Ertd472e}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67102 | |||
|HGNC= | |||
|MCL_coexpression_id=267 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D7G4 | |||
|association_with_transcript=0bp_to_ENSMUST00000114218,ENSMUST00000114219,ENSMUST00000114220,uc007zsr.2_5end | |||
|cluster_id=chr16:78576894..78576911,- | |||
|description=CAGE_peak_1_at_D16Ertd472e_5end | |||
|id=chr16:78576894..78576911,- | |||
|ontology_enrichment_celltype=CL:0000838!1.15e-08!12;CL:0000542!1.48e-08!13;CL:0000051!1.48e-08!13;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000791!2.08e-07!9;CL:0000789!2.08e-07!9;CL:0002420!2.08e-07!9;CL:0002419!2.08e-07!9;CL:0000790!2.08e-07!9;CL:0000988!3.75e-07!32;CL:0002032!3.75e-07!32;CL:0000037!3.75e-07!32;CL:0000566!3.75e-07!32;CL:0000837!3.75e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.15e-08,12;CL:0000542,1.47e-08,13;CL:0000051,1.47e-08,13;CL:0000084,3.61e-08,11;CL:0000827,3.61e-08,11;CL:0000791,2.07e-07,9;CL:0000789,2.07e-07,9;CL:0002420,2.07e-07,9;CL:0002419,2.07e-07,9;CL:0000790,2.07e-07,9;CL:0000988,3.44e-07,32;CL:0002032,3.44e-07,32;CL:0000037,3.44e-07,32;CL:0000837,3.44e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!7.66e-14!41;UBERON:0006562!4.03e-13!24;UBERON:0001557!4.03e-13!24;UBERON:0001042!4.03e-13!24;UBERON:0008814!4.03e-13!24;UBERON:0009145!4.03e-13!24;UBERON:0001004!8.90e-13!42;UBERON:0002370!1.08e-12!23;UBERON:0000974!1.08e-12!23;UBERON:0004807!1.08e-12!23;UBERON:0005058!1.08e-12!23;UBERON:0003351!1.08e-12!23;UBERON:0009113!1.08e-12!23;UBERON:0003295!1.08e-12!23;UBERON:0009722!1.08e-12!23;UBERON:0005562!1.08e-12!23;UBERON:0007690!1.08e-12!23;UBERON:0000072!2.85e-12!27;UBERON:0003408!2.78e-11!24;UBERON:0004177!3.26e-11!29;UBERON:0002368!2.19e-09!60;UBERON:0005057!3.68e-09!51;UBERON:0002530!9.00e-09!65;UBERON:0000063!1.43e-08!35;UBERON:0002390!3.42e-08!45;UBERON:0003061!3.42e-08!45;UBERON:0002193!6.70e-08!48;UBERON:0002405!1.46e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.59e-14,41;UBERON:0006562,3.99e-13,24;UBERON:0001557,3.99e-13,24;UBERON:0001042,3.99e-13,24;UBERON:0008814,3.99e-13,24;UBERON:0009145,3.99e-13,24;UBERON:0001004,9.30e-13,42;UBERON:0002370,1.08e-12,23;UBERON:0000974,1.08e-12,23;UBERON:0004807,1.08e-12,23;UBERON:0005058,1.08e-12,23;UBERON:0003351,1.08e-12,23;UBERON:0009113,1.08e-12,23;UBERON:0003295,1.08e-12,23;UBERON:0009722,1.08e-12,23;UBERON:0005562,1.08e-12,23;UBERON:0007690,1.08e-12,23;UBERON:0000072,2.83e-12,27;UBERON:0000077,4.68e-12,35;UBERON:0003408,2.94e-11,24;UBERON:0004177,3.23e-11,29;UBERON:0005057,3.23e-11,29;UBERON:0000153,1.66e-09,43;UBERON:0001041,1.71e-09,80;UBERON:0002368,2.03e-09,60;UBERON:0002530,8.67e-09,65;UBERON:0007811,1.33e-08,36;UBERON:0002390,3.33e-08,45;UBERON:0003061,3.33e-08,45;UBERON:0002193,6.55e-08,48;UBERON:0002405,6.55e-08,48 | |||
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| |||
|short_description=p1@D16Ertd472e | |||
}} |
Revision as of 02:30, 4 August 2015
Short description: | p1@D16Ertd472e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D16Ertd472e_5end |
Coexpression cluster: | MCL_coexpression_mm9:267 |
Association with transcript: | 0bp_to_ENSMUST00000114218, ENSMUST00000114219, ENSMUST00000114220, uc007zsr.2_5end |
EntrezGene: | 67102 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.15e-08 | 12 |
lymphocyte | 1.47e-08 | 13 |
common lymphoid progenitor | 1.47e-08 | 13 |
T cell | 3.61e-08 | 11 |
pro-T cell | 3.61e-08 | 11 |
mature alpha-beta T cell | 2.07e-07 | 9 |
alpha-beta T cell | 2.07e-07 | 9 |
immature T cell | 2.07e-07 | 9 |
mature T cell | 2.07e-07 | 9 |
immature alpha-beta T cell | 2.07e-07 | 9 |
hematopoietic cell | 3.44e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.44e-07 | 32 |
hematopoietic stem cell | 3.44e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.44e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 7.59e-14 | 41 |
pharynx | 3.99e-13 | 24 |
upper respiratory tract | 3.99e-13 | 24 |
chordate pharynx | 3.99e-13 | 24 |
pharyngeal arch system | 3.99e-13 | 24 |
pharyngeal region of foregut | 3.99e-13 | 24 |
respiratory system | 9.30e-13 | 42 |
thymus | 1.08e-12 | 23 |
neck | 1.08e-12 | 23 |
respiratory system epithelium | 1.08e-12 | 23 |
hemolymphoid system gland | 1.08e-12 | 23 |
pharyngeal epithelium | 1.08e-12 | 23 |
thymic region | 1.08e-12 | 23 |
pharyngeal gland | 1.08e-12 | 23 |
entire pharyngeal arch endoderm | 1.08e-12 | 23 |
thymus primordium | 1.08e-12 | 23 |
early pharyngeal endoderm | 1.08e-12 | 23 |
segment of respiratory tract | 2.83e-12 | 27 |
mixed endoderm/mesoderm-derived structure | 4.68e-12 | 35 |
gland of gut | 2.94e-11 | 24 |
hemopoietic organ | 3.23e-11 | 29 |
immune organ | 3.23e-11 | 29 |
anterior region of body | 1.66e-09 | 43 |
foregut | 1.71e-09 | 80 |
endocrine gland | 2.03e-09 | 60 |
gland | 8.67e-09 | 65 |
craniocervical region | 1.33e-08 | 36 |
hematopoietic system | 3.33e-08 | 45 |
blood island | 3.33e-08 | 45 |
hemolymphoid system | 6.55e-08 | 48 |
immune system | 6.55e-08 | 48 |