Personal tools

FFCP PHASE1:Mm9::chr3:88259252..88259269,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=20351|HGNC=|UniProt=|association_with_transcript=-16bp_to_ENSMUST00000153533_5end|description=CAGE_peak_5_at_Sema4a_5end|id=chr3:88259252..88259269,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.29e-14!130;UBERON:0000925!6.29e-14!130;UBERON:0006595!6.29e-14!130;UBERON:0001007!9.24e-14!128;UBERON:0001555!9.24e-14!128;UBERON:0007026!9.24e-14!128;UBERON:0004921!6.06e-13!126;UBERON:0004185!6.06e-13!126;UBERON:0005409!1.32e-08!59;UBERON:0002193!2.49e-08!48;UBERON:0004923!7.86e-08!24;UBERON:0002405!2.04e-07!70;UBERON:0004177!3.17e-07!29;UBERON:0000160!3.52e-07!43;UBERON:0002390!4.64e-07!45;UBERON:0003061!4.64e-07!45;UBERON:0003929!7.36e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.44e-13,118;UBERON:0000925,1.44e-13,118;UBERON:0006595,1.44e-13,118;UBERON:0001007,1.57e-13,116;UBERON:0001555,1.57e-13,116;UBERON:0007026,1.57e-13,116;UBERON:0004921,1.52e-12,114;UBERON:0000160,8.34e-12,31;UBERON:0002193,2.35e-11,48;UBERON:0002405,2.35e-11,48;UBERON:0005409,6.00e-11,47;UBERON:0000077,1.47e-10,35;UBERON:0004177,4.54e-10,29;UBERON:0005057,4.54e-10,29;UBERON:0002390,1.49e-09,45;UBERON:0003061,1.49e-09,45;UBERON:0003408,1.83e-09,24;UBERON:0007023,2.01e-09,51;UBERON:0006562,5.44e-09,24;UBERON:0001557,5.44e-09,24;UBERON:0001042,5.44e-09,24;UBERON:0008814,5.44e-09,24;UBERON:0009145,5.44e-09,24;UBERON:0002370,8.80e-09,23;UBERON:0000974,8.80e-09,23;UBERON:0004807,8.80e-09,23;UBERON:0005058,8.80e-09,23;UBERON:0003351,8.80e-09,23;UBERON:0009113,8.80e-09,23;UBERON:0003295,8.80e-09,23;UBERON:0009722,8.80e-09,23;UBERON:0005562,8.80e-09,23;UBERON:0007690,8.80e-09,23;UBERON:0004923,1.57e-07,24;UBERON:0000072,2.51e-07,27;UBERON:0000344,2.93e-07,15|phase1_expression=0.160148847104794,4.18770489167233,6.3699893514535,5.14189159221611,1.00179145989269,2.68606835059024,1.63528848416868,2.58246646883153,1.68946466582,3.7450324211519,0,0.159544317990673,29.4465255481674,26.9254839450512,0.999329285446988,1.82227740650843,0,6.94016763788123,4.52477630898938,2.97072756258621,2.12608225377674,32.2695591402877,15.9331871374751,2.07990149631429,5.73523202667925,4.01962374880514,3.4460959692726,3.44753972297422,7.60093677825496,8.06496415231778,2.88249663851896,0,0,0,1.1554064790051,0.831173226792462,0.408338712524738,8.78916424547506,3.1253413780952,6.80580867165938,14.7057872007754,14.3439551841274,7.76816564849846,0,0,0,0,0,0,0,0,0,0,13.7818806982155,34.2815675125313,0,0,2.06268836910977,0,0,0,0,0,0.449949858640699,2.96659908770092,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0.289864488701678,0.860423876981386,0,0.539703191637817,1.29955283489534,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.59857431606684,39.6174961980173,1.03909497345377,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0.988779870937496,1.44599356919912,4.42305275974937,0.161766849947409,0.662524555381181,0.969750506270444,5.59175283654366,0,0,3.57639877292028,0.718890747035522,0,2.03312363316904,0,0,0,0.173824320192276,0,0,0,0.101839363850316,3.11017426525233,3.28539585963777,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0,0.772043721344145,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.162137619091711,0,0.439100230582101,0.536825675041487,0,0,7.26921322564356,3.96675849995316,0.213288250535234,0,0.257734922644187,1.4117846723634,2.44615848229357,2.09248188723815,3.79623249235609,1.4822905925161,2.01068167040216,1.1937388322469,2.14460495831032,8.08937467788799,5.18731319699266,4.18196673834171,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.631222379012867,3.22506339333712,3.09981310757165,4.08196692387575,2.59134044235781,0.889357881261447,0,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,1.86070473834252,1.87222603868736,0.757736633841335,0.358794827043824,0.964887042726734,5.17308932466493,0,0,0.339490171550376,0,0,0.238043640886014,0,0.788175720530955,0.44292937929755,0.956728611944923,2.78567635016755,2.07221978239075,1.88043776155965,0,1.08781136763742,2.95058563811422,1.65562047782839,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,2.98074178937364,0.712262414669021,0.162886959353576,3.46437258242324,1.32745138339963,0,0,0.188605079755898,0,0.614870295887855,0.516856586336442,0,1.06949213515416,0.948110273807448,2.10837217149998,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0.304464949114599,1.64270195644597,0.21183207086382,2.20528398054962,3.62749756471256,0.484393280087717,1.74907482291652,0.954978752025092,0.656563598980245,2.91480836629851,0,3.75915937755276,0.82554747185289,1.11116716421827,1.31857919903284,2.05041341581538,2.74533807847827,0.679913719975421,1.11961161858926,0.690999869022119,3.81868247206045,0,0,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.578574190077352,1.04702376793612,5.4438288782553,4.34937519160848,0,0.897099276263873,0.992750942742586,1.16670713006429,0.904118764344118,1.18269287843545,0.117357238645754,0.2604087696879,0.314578033277133,0,0,5.68820017130721,4.05450430580328,5.85452455839515,5.3267537420896,3.04345382634718,3.17890167650024,2.28371354087941,3.10148007066612,2.3222283488074,2.43861781295999,2.41982844328417,3.50848370663109,4.42574471545516,4.09069157635491,1.13365191807606,0,0,0,2.31827512838629,7.50729901804728,2.19781949120718,2.78678892802786,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.468207537349412,0.256100609619477,0.287177344778066,0.952587382566147,0,0,0.824171801606613,0.294397840268795,0,0.177475806159338,0.476872379894642,0.290692833264657,0.470546902076653,0.25384382367503,0,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.818462086339379,0.309873682371932,0.578719832943424,0,0.467863216890817,0.429742108096597,0.191288332068843,0.441182838239031,0.927471342481686|short_description=p5@Sema4a}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20351
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-16bp_to_ENSMUST00000153533_5end
|cluster_id=chr3:88259252..88259269,-
|description=CAGE_peak_5_at_Sema4a_5end
|id=chr3:88259252..88259269,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!6.29e-14!130;UBERON:0000925!6.29e-14!130;UBERON:0006595!6.29e-14!130;UBERON:0001007!9.24e-14!128;UBERON:0001555!9.24e-14!128;UBERON:0007026!9.24e-14!128;UBERON:0004921!6.06e-13!126;UBERON:0004185!6.06e-13!126;UBERON:0005409!1.32e-08!59;UBERON:0002193!2.49e-08!48;UBERON:0004923!7.86e-08!24;UBERON:0002405!2.04e-07!70;UBERON:0004177!3.17e-07!29;UBERON:0000160!3.52e-07!43;UBERON:0002390!4.64e-07!45;UBERON:0003061!4.64e-07!45;UBERON:0003929!7.36e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.44e-13,118;UBERON:0000925,1.44e-13,118;UBERON:0006595,1.44e-13,118;UBERON:0001007,1.57e-13,116;UBERON:0001555,1.57e-13,116;UBERON:0007026,1.57e-13,116;UBERON:0004921,1.52e-12,114;UBERON:0000160,8.34e-12,31;UBERON:0002193,2.35e-11,48;UBERON:0002405,2.35e-11,48;UBERON:0005409,6.00e-11,47;UBERON:0000077,1.47e-10,35;UBERON:0004177,4.54e-10,29;UBERON:0005057,4.54e-10,29;UBERON:0002390,1.49e-09,45;UBERON:0003061,1.49e-09,45;UBERON:0003408,1.83e-09,24;UBERON:0007023,2.01e-09,51;UBERON:0006562,5.44e-09,24;UBERON:0001557,5.44e-09,24;UBERON:0001042,5.44e-09,24;UBERON:0008814,5.44e-09,24;UBERON:0009145,5.44e-09,24;UBERON:0002370,8.80e-09,23;UBERON:0000974,8.80e-09,23;UBERON:0004807,8.80e-09,23;UBERON:0005058,8.80e-09,23;UBERON:0003351,8.80e-09,23;UBERON:0009113,8.80e-09,23;UBERON:0003295,8.80e-09,23;UBERON:0009722,8.80e-09,23;UBERON:0005562,8.80e-09,23;UBERON:0007690,8.80e-09,23;UBERON:0004923,1.57e-07,24;UBERON:0000072,2.51e-07,27;UBERON:0000344,2.93e-07,15
|phase1_expression=0.160148847104794,4.18770489167233,6.3699893514535,5.14189159221611,1.00179145989269,2.68606835059024,1.63528848416868,2.58246646883153,1.68946466582,3.7450324211519,0,0.159544317990673,29.4465255481674,26.9254839450512,0.999329285446988,1.82227740650843,0,6.94016763788123,4.52477630898938,2.97072756258621,2.12608225377674,32.2695591402877,15.9331871374751,2.07990149631429,5.73523202667925,4.01962374880514,3.4460959692726,3.44753972297422,7.60093677825496,8.06496415231778,2.88249663851896,0,0,0,1.1554064790051,0.831173226792462,0.408338712524738,8.78916424547506,3.1253413780952,6.80580867165938,14.7057872007754,14.3439551841274,7.76816564849846,0,0,0,0,0,0,0,0,0,0,13.7818806982155,34.2815675125313,0,0,2.06268836910977,0,0,0,0,0,0.449949858640699,2.96659908770092,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0.289864488701678,0.860423876981386,0,0.539703191637817,1.29955283489534,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.59857431606684,39.6174961980173,1.03909497345377,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0.988779870937496,1.44599356919912,4.42305275974937,0.161766849947409,0.662524555381181,0.969750506270444,5.59175283654366,0,0,3.57639877292028,0.718890747035522,0,2.03312363316904,0,0,0,0.173824320192276,0,0,0,0.101839363850316,3.11017426525233,3.28539585963777,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0,0.772043721344145,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.162137619091711,0,0.439100230582101,0.536825675041487,0,0,7.26921322564356,3.96675849995316,0.213288250535234,0,0.257734922644187,1.4117846723634,2.44615848229357,2.09248188723815,3.79623249235609,1.4822905925161,2.01068167040216,1.1937388322469,2.14460495831032,8.08937467788799,5.18731319699266,4.18196673834171,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.631222379012867,3.22506339333712,3.09981310757165,4.08196692387575,2.59134044235781,0.889357881261447,0,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,1.86070473834252,1.87222603868736,0.757736633841335,0.358794827043824,0.964887042726734,5.17308932466493,0,0,0.339490171550376,0,0,0.238043640886014,0,0.788175720530955,0.44292937929755,0.956728611944923,2.78567635016755,2.07221978239075,1.88043776155965,0,1.08781136763742,2.95058563811422,1.65562047782839,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,2.98074178937364,0.712262414669021,0.162886959353576,3.46437258242324,1.32745138339963,0,0,0.188605079755898,0,0.614870295887855,0.516856586336442,0,1.06949213515416,0.948110273807448,2.10837217149998,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0.304464949114599,1.64270195644597,0.21183207086382,2.20528398054962,3.62749756471256,0.484393280087717,1.74907482291652,0.954978752025092,0.656563598980245,2.91480836629851,0,3.75915937755276,0.82554747185289,1.11116716421827,1.31857919903284,2.05041341581538,2.74533807847827,0.679913719975421,1.11961161858926,0.690999869022119,3.81868247206045,0,0,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.578574190077352,1.04702376793612,5.4438288782553,4.34937519160848,0,0.897099276263873,0.992750942742586,1.16670713006429,0.904118764344118,1.18269287843545,0.117357238645754,0.2604087696879,0.314578033277133,0,0,5.68820017130721,4.05450430580328,5.85452455839515,5.3267537420896,3.04345382634718,3.17890167650024,2.28371354087941,3.10148007066612,2.3222283488074,2.43861781295999,2.41982844328417,3.50848370663109,4.42574471545516,4.09069157635491,1.13365191807606,0,0,0,2.31827512838629,7.50729901804728,2.19781949120718,2.78678892802786,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.468207537349412,0.256100609619477,0.287177344778066,0.952587382566147,0,0,0.824171801606613,0.294397840268795,0,0.177475806159338,0.476872379894642,0.290692833264657,0.470546902076653,0.25384382367503,0,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.818462086339379,0.309873682371932,0.578719832943424,0,0.467863216890817,0.429742108096597,0.191288332068843,0.441182838239031,0.927471342481686
|short_description=p5@Sema4a
}}

Revision as of 03:55, 4 August 2015

Short description:p5@Sema4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Sema4a_5end
Coexpression cluster:NA
Association with transcript: -16bp_to_ENSMUST00000153533_5end
EntrezGene:20351
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Sema4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E429.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E826.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B97.60
Ileum epithelium, pool2.CNhs13232.10253-104C18.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.28
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H939.62
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I15.44
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D32.44
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G74.43
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.44e-13118
endoderm1.44e-13118
presumptive endoderm1.44e-13118
digestive system1.57e-13116
digestive tract1.57e-13116
primitive gut1.57e-13116
subdivision of digestive tract1.52e-12114
intestine8.34e-1231
hemolymphoid system2.35e-1148
immune system2.35e-1148
gastrointestinal system6.00e-1147
mixed endoderm/mesoderm-derived structure1.47e-1035
hemopoietic organ4.54e-1029
immune organ4.54e-1029
hematopoietic system1.49e-0945
blood island1.49e-0945
gland of gut1.83e-0924
adult organism2.01e-0951
pharynx5.44e-0924
upper respiratory tract5.44e-0924
chordate pharynx5.44e-0924
pharyngeal arch system5.44e-0924
pharyngeal region of foregut5.44e-0924
thymus8.80e-0923
neck8.80e-0923
respiratory system epithelium8.80e-0923
hemolymphoid system gland8.80e-0923
pharyngeal epithelium8.80e-0923
thymic region8.80e-0923
pharyngeal gland8.80e-0923
entire pharyngeal arch endoderm8.80e-0923
thymus primordium8.80e-0923
early pharyngeal endoderm8.80e-0923
organ component layer1.57e-0724
segment of respiratory tract2.51e-0727
mucosa2.93e-0715
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:88259252..88259269,-&oldid=3733709"