FFCP PHASE1:Mm9::chr19:56948531..56948548,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=240675|HGNC=|MCL_coexpression_id=105|UniProt=Q70UZ7|association_with_transcript=-190bp_to_ENSMUST00000026068_5end|description=CAGE_peak_3_at_Vwa2_5end|id=chr19:56948531..56948548,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,2.15e-17,3;CL:0002563,5.40e-10,9;CL:0002251,5.40e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!3.09e-08!17;UBERON:0005178!3.35e-08!17;UBERON:0005181!3.35e-08!17;UBERON:0002224!3.35e-08!17;UBERON:0000915!3.35e-08!17;UBERON:0008947!3.35e-08!17;UBERON:0003258!3.35e-08!17;UBERON:0002048!5.82e-08!14;UBERON:0000117!5.82e-08!14;UBERON:0000171!5.82e-08!14;UBERON:0000170!5.82e-08!14;UBERON:0005597!5.82e-08!14;UBERON:0000118!5.82e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.40e-10,9;UBERON:0004808,5.40e-10,9;UBERON:0001277,5.40e-10,9;UBERON:0004175,1.70e-09,9;UBERON:0000310,1.01e-08,6;UBERON:0001443,1.01e-08,6;UBERON:0000485,3.35e-08,11;UBERON:0001242,5.89e-07,13;UBERON:0001262,5.89e-07,13;UBERON:0004786,5.89e-07,13|phase1_expression=0,0,0,0,0,1.84667199103079,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.799962113967033,0.68822784320151,0,0,0.646413698057667,0.380046838912748,0.252030129759931,0,0,0,0,5.48818077527422,4.15586613396231,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,1.26361379216837,0,0,0,0,0,0.272145996605311,0.12811372028485,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,1.79763881730844,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0.193952487167626,0.420814919341911,0.69560190836683,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,2.28150967018836,2.71592137240301,4.22442446919304,0.837531287209079,1.42826184531608,0.585400943573396,0.630540576424764,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0.162886959353576,0.989820737835213,0,1.45668381692989,0.906970670894253,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0.220528398054962,1.31909002353184,0.645857706783622,0.241251699712623,0.119372344003136,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0.790839983952838,1.62655573701479,0.756037385752609,1.67270636811575,0.655087691238533,0.269728692769641,0.330613822901344,0.785267825952089,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.5208175393758,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.226730383615211,0,0,0,0,2.064507229963,3.11357761254351,0.857473516316263,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.962757628775446,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0,0.231768651889711,0.192909220463705,0.824171801606613,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0,0.182927972872773,0,0,0,0.355905054372522,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p3@Vwa2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:240675 | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q70UZ7 | |||
|association_with_transcript=-190bp_to_ENSMUST00000026068_5end | |||
|cluster_id=chr19:56948531..56948548,+ | |||
|description=CAGE_peak_3_at_Vwa2_5end | |||
|id=chr19:56948531..56948548,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.15e-17,3;CL:0002563,5.40e-10,9;CL:0002251,5.40e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!3.09e-08!17;UBERON:0005178!3.35e-08!17;UBERON:0005181!3.35e-08!17;UBERON:0002224!3.35e-08!17;UBERON:0000915!3.35e-08!17;UBERON:0008947!3.35e-08!17;UBERON:0003258!3.35e-08!17;UBERON:0002048!5.82e-08!14;UBERON:0000117!5.82e-08!14;UBERON:0000171!5.82e-08!14;UBERON:0000170!5.82e-08!14;UBERON:0005597!5.82e-08!14;UBERON:0000118!5.82e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.40e-10,9;UBERON:0004808,5.40e-10,9;UBERON:0001277,5.40e-10,9;UBERON:0004175,1.70e-09,9;UBERON:0000310,1.01e-08,6;UBERON:0001443,1.01e-08,6;UBERON:0000485,3.35e-08,11;UBERON:0001242,5.89e-07,13;UBERON:0001262,5.89e-07,13;UBERON:0004786,5.89e-07,13 | |||
|phase1_expression=0,0,0,0,0,1.84667199103079,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.799962113967033,0.68822784320151,0,0,0.646413698057667,0.380046838912748,0.252030129759931,0,0,0,0,5.48818077527422,4.15586613396231,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,1.26361379216837,0,0,0,0,0,0.272145996605311,0.12811372028485,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,1.79763881730844,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0.193952487167626,0.420814919341911,0.69560190836683,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,2.28150967018836,2.71592137240301,4.22442446919304,0.837531287209079,1.42826184531608,0.585400943573396,0.630540576424764,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0.162886959353576,0.989820737835213,0,1.45668381692989,0.906970670894253,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0.220528398054962,1.31909002353184,0.645857706783622,0.241251699712623,0.119372344003136,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0.790839983952838,1.62655573701479,0.756037385752609,1.67270636811575,0.655087691238533,0.269728692769641,0.330613822901344,0.785267825952089,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.5208175393758,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.226730383615211,0,0,0,0,2.064507229963,3.11357761254351,0.857473516316263,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.962757628775446,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0,0.231768651889711,0.192909220463705,0.824171801606613,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0,0.182927972872773,0,0,0,0.355905054372522,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p3@Vwa2 | |||
}} |
Revision as of 09:32, 4 August 2015
Short description: | p3@Vwa2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vwa2_5end |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | -190bp_to_ENSMUST00000026068_5end |
EntrezGene: | 240675 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.15e-17 | 3 |
intestinal epithelial cell | 5.40e-10 | 9 |
epithelial cell of alimentary canal | 5.40e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.40e-10 | 9 |
gastrointestinal system epithelium | 5.40e-10 | 9 |
intestinal epithelium | 5.40e-10 | 9 |
internal genitalia | 1.70e-09 | 9 |
breast | 1.01e-08 | 6 |
chest | 1.01e-08 | 6 |
simple columnar epithelium | 3.35e-08 | 11 |
intestinal mucosa | 5.89e-07 | 13 |
wall of intestine | 5.89e-07 | 13 |
gastrointestinal system mucosa | 5.89e-07 | 13 |