FFCP PHASE1:Mm9::chr14:56179741..56179811,+: Difference between revisions
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{{FFCP|EntrezGene=28199|HGNC=|MCL_coexpression_id=8|UniProt=Q91VU6,D3YVR5,Q3UD98|association_with_transcript=0bp_to_ENSMUST00000072530,ENSMUST00000128490,NM_001199009,uc007tzb.2_5end|description=CAGE_peak_3_at_Dcaf11_5end|id=chr14:56179741..56179811,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!3.34e-14!122;UBERON:0000025!1.18e-12!114;UBERON:0000477!3.41e-10!154;UBERON:0000119!1.62e-09!183;UBERON:0000483!1.89e-09!181;UBERON:0001049!9.83e-09!52;UBERON:0005068!9.83e-09!52;UBERON:0006241!9.83e-09!52;UBERON:0007135!9.83e-09!52;UBERON:0000475!4.87e-08!200;UBERON:0000955!5.11e-08!50;UBERON:0006238!5.11e-08!50;UBERON:0002616!6.35e-08!49;UBERON:0000073!6.86e-08!75;UBERON:0001016!6.86e-08!75;UBERON:0002020!7.07e-08!34;UBERON:0001017!9.72e-08!73;UBERON:0005743!9.72e-08!73;UBERON:0002365!1.98e-07!25;UBERON:0002330!1.98e-07!25;UBERON:0005256!2.75e-07!47;UBERON:0000033!4.41e-07!63;UBERON:0000062!7.66e-07!269|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.39e-14,122;UBERON:0000025,1.21e-12,114;UBERON:0000119,4.96e-10,176;UBERON:0000483,5.71e-10,174;UBERON:0000073,2.81e-09,54;UBERON:0001049,9.82e-09,52;UBERON:0005068,9.82e-09,52;UBERON:0006241,9.82e-09,52;UBERON:0007135,9.82e-09,52;UBERON:0001016,6.86e-08,75;UBERON:0002020,7.07e-08,34;UBERON:0001017,9.72e-08,73;UBERON:0002365,1.98e-07,25;UBERON:0002330,1.98e-07,25;UBERON:0000955,2.47e-07,47;UBERON:0006238,2.47e-07,47;UBERON:0002616,3.06e-07,46|phase1_expression=8.0074423552397,9.77131141390211,5.91499011206397,4.23449895829562,5.50985302940982,3.18970616632591,3.50418960893289,5.93967287831251,1.68946466582,3.5109678948299,1.54096171402954,1.19658238493005,5.64962408772979,6.7313709862628,1.33243904726265,1.61980213911861,3.49780939064073,8.99067171270977,8.91243818437302,6.36584477697045,8.1641558545027,5.75887516965135,4.70159620450084,4.7997726838022,6.8822784320151,7.46501553349526,6.03066794622705,6.03319451520489,6.08074942260396,5.04060259519861,5.76499327703792,0.635030673459631,0.61506478758457,0,0.866554859253824,0.997407872150954,1.42918549383658,26.7860243671621,22.6587249911902,19.3703785270305,21.1763335691165,17.0761371239611,29.1306211818692,5.5394599909254,4.96746962975621,4.22157529971868,5.47673941043627,5.88667922227206,8.12838876117546,7.58276606389705,7.27929392451885,10.062679505548,9.56360854529097,2.90144856804538,6.04968838456435,4.63066984864705,4.01146815914259,3.09403255366465,4.65327859977075,5.28990979272033,3.80298842103708,3.04960078862219,6.22506357277798,5.39939830368839,5.93319817540185,6.3943210345149,5.09320187881288,4.61061966385865,5.28817022773236,5.40023753326763,5.67877395648731,9.42648248532552,7.95126747425809,4.65465037016825,6.70918297127655,6.43453150627015,5.50579404996943,8.93811366596314,6.29786786350598,7.25374582516066,6.86157327018072,4.68822033501084,8.93385596804419,5.6276261003168,9.47349136216223,6.18720029494702,6.26435395516053,6.15118171223492,4.92220256665696,5.29000920747499,8.40607017234866,48.1837371109576,22.4390540123558,52.8909127805061,44.8345728038892,36.7382047419815,18.117330196996,3.74946709671727,4.67614808285164,3.18005617059306,9.01397886570755,7.69958864485907,2.54805239706646,14.2213340630666,1.5154372870785,2.28023878927589,2.02209778005913,18.3836046347687,3.10725460376606,6.08612770165782,2.60227990149204,3.04465478312141,2.07553947530453,2.71300752994721,3.76283862834255,6.78599593180248,2.47194967734374,4.19338135067744,3.5384422077995,2.91180329905337,3.09178125844551,2.42437626567611,3.72783522436244,7.61230072230023,13.6140359428746,5.62005521458901,2.87556298814209,1.79970819298022,1.77898317902291,5.09288173976397,5.03250663100489,5.27748278874031,6.60532416730651,6.90431734791892,6.02585329222724,6.97637431191358,4.07357455401265,6.96679035416521,19.9650979162603,6.31325567659422,1.56144531555244,1.83921683546778,2.16074555766419,1.65775299619287,3.12967896096108,4.35586648968489,5.99691037182265,6.46758426847539,1.29340795759705,2.83659120251729,2.11141348996739,1.53437012699302,2.22437799380478,3.1342694986995,1.64625709126355,1.59227413454795,0.702213187313235,3.60287069960601,2.84163499395593,1.65700618028402,0.938104239924385,3.6012412292203,1.89395788468168,1.18058539048442,2.62254091908543,2.55787339225449,3.21928081679543,2.21854150497622,3.94943639792353,4.76085645829376,4.70199095365963,5.26319954731196,5.04965265169416,6.1734952629771,7.14985825118033,5.65975368086064,3.63460661282178,2.90895623329899,2.55945900642281,2.09013004674395,1.54640953586512,1.4117846723634,0.667134131534611,1.52180500890047,2.37264530772256,1.31759163779209,2.5133520880027,2.58643413653496,2.33956904542944,2.69645822596266,3.24207074812041,4.18196673834171,3.03468641524931,3.88444942873078,1.1270773567308,3.25842124552503,4.07300223052014,5.96154469067708,6.70307293517127,15.7942858338174,12.8738956829927,15.6714398180687,26.9771890649305,2.16898637430922,2.1621489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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:28199 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91VU6,uniprot:D3YVR5,uniprot:Q3UD98 | |||
|association_with_transcript=0bp_to_ENSMUST00000072530,ENSMUST00000128490,NM_001199009,uc007tzb.2_5end | |||
|cluster_id=chr14:56179741..56179811,+ | |||
|description=CAGE_peak_3_at_Dcaf11_5end | |||
|id=chr14:56179741..56179811,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.34e-14!122;UBERON:0000025!1.18e-12!114;UBERON:0000477!3.41e-10!154;UBERON:0000119!1.62e-09!183;UBERON:0000483!1.89e-09!181;UBERON:0001049!9.83e-09!52;UBERON:0005068!9.83e-09!52;UBERON:0006241!9.83e-09!52;UBERON:0007135!9.83e-09!52;UBERON:0000475!4.87e-08!200;UBERON:0000955!5.11e-08!50;UBERON:0006238!5.11e-08!50;UBERON:0002616!6.35e-08!49;UBERON:0000073!6.86e-08!75;UBERON:0001016!6.86e-08!75;UBERON:0002020!7.07e-08!34;UBERON:0001017!9.72e-08!73;UBERON:0005743!9.72e-08!73;UBERON:0002365!1.98e-07!25;UBERON:0002330!1.98e-07!25;UBERON:0005256!2.75e-07!47;UBERON:0000033!4.41e-07!63;UBERON:0000062!7.66e-07!269 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.39e-14,122;UBERON:0000025,1.21e-12,114;UBERON:0000119,4.96e-10,176;UBERON:0000483,5.71e-10,174;UBERON:0000073,2.81e-09,54;UBERON:0001049,9.82e-09,52;UBERON:0005068,9.82e-09,52;UBERON:0006241,9.82e-09,52;UBERON:0007135,9.82e-09,52;UBERON:0001016,6.86e-08,75;UBERON:0002020,7.07e-08,34;UBERON:0001017,9.72e-08,73;UBERON:0002365,1.98e-07,25;UBERON:0002330,1.98e-07,25;UBERON:0000955,2.47e-07,47;UBERON:0006238,2.47e-07,47;UBERON:0002616,3.06e-07,46 | |||
|phase1_expression=8.0074423552397,9.77131141390211,5.91499011206397,4.23449895829562,5.50985302940982,3.18970616632591,3.50418960893289,5.93967287831251,1.68946466582,3.5109678948299,1.54096171402954,1.19658238493005,5.64962408772979,6.7313709862628,1.33243904726265,1.61980213911861,3.49780939064073,8.99067171270977,8.91243818437302,6.36584477697045,8.1641558545027,5.75887516965135,4.70159620450084,4.7997726838022,6.8822784320151,7.46501553349526,6.03066794622705,6.03319451520489,6.08074942260396,5.04060259519861,5.76499327703792,0.635030673459631,0.61506478758457,0,0.866554859253824,0.997407872150954,1.42918549383658,26.7860243671621,22.6587249911902,19.3703785270305,21.1763335691165,17.0761371239611,29.1306211818692,5.5394599909254,4.96746962975621,4.22157529971868,5.47673941043627,5.88667922227206,8.12838876117546,7.58276606389705,7.27929392451885,10.062679505548,9.56360854529097,2.90144856804538,6.04968838456435,4.63066984864705,4.01146815914259,3.09403255366465,4.65327859977075,5.28990979272033,3.80298842103708,3.04960078862219,6.22506357277798,5.39939830368839,5.93319817540185,6.3943210345149,5.09320187881288,4.61061966385865,5.28817022773236,5.40023753326763,5.67877395648731,9.42648248532552,7.95126747425809,4.65465037016825,6.70918297127655,6.43453150627015,5.50579404996943,8.93811366596314,6.29786786350598,7.25374582516066,6.86157327018072,4.68822033501084,8.93385596804419,5.6276261003168,9.47349136216223,6.18720029494702,6.26435395516053,6.15118171223492,4.92220256665696,5.29000920747499,8.40607017234866,48.1837371109576,22.4390540123558,52.8909127805061,44.8345728038892,36.7382047419815,18.117330196996,3.74946709671727,4.67614808285164,3.18005617059306,9.01397886570755,7.69958864485907,2.54805239706646,14.2213340630666,1.5154372870785,2.28023878927589,2.02209778005913,18.3836046347687,3.10725460376606,6.08612770165782,2.60227990149204,3.04465478312141,2.07553947530453,2.71300752994721,3.76283862834255,6.78599593180248,2.47194967734374,4.19338135067744,3.5384422077995,2.91180329905337,3.09178125844551,2.42437626567611,3.72783522436244,7.61230072230023,13.6140359428746,5.62005521458901,2.87556298814209,1.79970819298022,1.77898317902291,5.09288173976397,5.03250663100489,5.27748278874031,6.60532416730651,6.90431734791892,6.02585329222724,6.97637431191358,4.07357455401265,6.96679035416521,19.9650979162603,6.31325567659422,1.56144531555244,1.83921683546778,2.16074555766419,1.65775299619287,3.12967896096108,4.35586648968489,5.99691037182265,6.46758426847539,1.29340795759705,2.83659120251729,2.11141348996739,1.53437012699302,2.22437799380478,3.1342694986995,1.64625709126355,1.59227413454795,0.702213187313235,3.60287069960601,2.84163499395593,1.65700618028402,0.938104239924385,3.6012412292203,1.89395788468168,1.18058539048442,2.62254091908543,2.55787339225449,3.21928081679543,2.21854150497622,3.94943639792353,4.76085645829376,4.70199095365963,5.26319954731196,5.04965265169416,6.1734952629771,7.14985825118033,5.65975368086064,3.63460661282178,2.90895623329899,2.55945900642281,2.09013004674395,1.54640953586512,1.4117846723634,0.667134131534611,1.52180500890047,2.37264530772256,1.31759163779209,2.5133520880027,2.58643413653496,2.33956904542944,2.69645822596266,3.24207074812041,4.18196673834171,3.03468641524931,3.88444942873078,1.1270773567308,3.25842124552503,4.07300223052014,5.96154469067708,6.70307293517127,15.7942858338174,12.8738956829927,15.6714398180687,26.9771890649305,2.16898637430922,2.16214894624523,1.12431056192427,2.23146133527353,4.3411888755435,6.62027214631691,5.4662266115654,12.9708181420028,14.0026320725922,23.0029130443767,11.5363693777236,27.7713529071959,42.938409251009,44.3111611399123,58.3756660849674,6.83586803616437,2.27389694124582,2.77040459951444,2.20668611507745,3.28566347603903,4.35516269348721,8.33152743101048,12.0982861671835,4.41378403497335,7.75126413770712,7.81328366421687,9.66793556822854,9.67035898449015,13.1630643309176,9.04747703635634,4.35124547054968,9.83528546038072,7.17435540392304,5.77982123956051,11.6039569726281,1.3114795630134,4.03953483526997,4.10160685241134,3.12350995437311,2.58508077279359,1.91175038362042,4.45597348164788,1.98153571552183,3.23848561339915,1.75353514746787,2.76701444562566,5.46246237917072,3.40656204499845,5.87616492101942,3.09485222771795,4.61916344323099,2.65490276679926,3.39892890616974,1.209294227859,4.52652191414155,5.02013217897314,5.84126781093462,2.32585463851399,3.27180356529755,2.13898427030833,4.10847785316561,9.48767477174989,6.18813259489121,8.5109901438447,3.06103859853227,3.49268446213437,2.35770738534752,3.01478397191865,3.0322698992352,4.11372551505302,6.39376393140658,2.11204537257339,5.50763384245932,8.15955072803359,2.63818004706368,1.45317984026315,4.22190474497091,3.81991500810037,2.46211349617592,2.62332752966866,5.93360966433631,4.27177201994632,4.12773735926445,2.40752885580625,1.31857919903284,3.69074414846768,2.97411625168479,0.679913719975421,3.07893195112048,1.65839968565309,2.86401185404534,1.89801596148681,2.64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| |||
|short_description=p3@Dcaf11 | |||
}} |
Revision as of 12:37, 4 August 2015
Short description: | p3@Dcaf11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dcaf11_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000072530, ENSMUST00000128490, NM_001199009, uc007tzb.2_5end |
EntrezGene: | 28199 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.39e-14 | 122 |
tube | 1.21e-12 | 114 |
cell layer | 4.96e-10 | 176 |
epithelium | 5.71e-10 | 174 |
regional part of nervous system | 2.81e-09 | 54 |
neural tube | 9.82e-09 | 52 |
neural rod | 9.82e-09 | 52 |
future spinal cord | 9.82e-09 | 52 |
neural keel | 9.82e-09 | 52 |
nervous system | 6.86e-08 | 75 |
gray matter | 7.07e-08 | 34 |
central nervous system | 9.72e-08 | 73 |
exocrine gland | 1.98e-07 | 25 |
exocrine system | 1.98e-07 | 25 |
brain | 2.47e-07 | 47 |
future brain | 2.47e-07 | 47 |
regional part of brain | 3.06e-07 | 46 |