FFCP PHASE1:Mm9::chr19:7281173..7281203,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:7281173..7281203,+|id=chr19:7281173..7281203,+|ontology_enrichment_celltype=CL:0000838!3.05e-19!12;CL:0000084!1.20e-17!11;CL:0000827!1.20e-17!11;CL:0000542!1.69e-17!13;CL:0000051!1.69e-17!13;CL:0000791!5.85e-15!9;CL:0000789!5.85e-15!9;CL:0002420!5.85e-15!9;CL:0002419!5.85e-15!9;CL:0000790!5.85e-15!9;CL:0000738!7.92e-15!17;CL:0002087!7.92e-15!17;CL:0000988!2.35e-14!32;CL:0002032!2.35e-14!32;CL:0000037!2.35e-14!32;CL:0000566!2.35e-14!32;CL:0000837!2.35e-14!32;CL:0000624!2.30e-13!8;CL:0002031!4.08e-12!25;CL:0000893!4.98e-10!6;CL:0002489!4.98e-10!6;CL:0000898!4.98e-10!6;CL:0000809!4.98e-10!6;CL:0000810!4.98e-10!6;CL:0000895!4.98e-10!6;CL:0000808!4.98e-10!6;CL:0000894!4.98e-10!6;CL:0000806!4.98e-10!6;CL:0000807!4.98e-10!6;CL:0000805!4.98e-10!6;CL:0002425!4.98e-10!6;CL:0002436!4.98e-10!6;CL:0002427!4.98e-10!6;CL:0002428!4.98e-10!6;CL:0002429!4.98e-10!6;CL:0002433!4.98e-10!6;CL:0002431!4.98e-10!6;CL:0002432!4.98e-10!6;CL:0002320!1.65e-09!46;CL:0000134!1.65e-09!46;CL:0000063!1.66e-07!66;CL:0000219!2.49e-07!54|ontology_enrichment_celltype_v019_2=CL:0000838,6.10e-24,12;CL:0000791,1.38e-22,9;CL:0000789,1.38e-22,9;CL:0002420,1.38e-22,9;CL:0002419,1.38e-22,9;CL:0000790,1.38e-22,9;CL:0000542,4.25e-22,13;CL:0000051,4.25e-22,13;CL:0000084,1.64e-18,11;CL:0000827,1.64e-18,11;CL:0000738,6.96e-17,17;CL:0002087,6.96e-17,17;CL:0000624,9.63e-17,8;CL:0002031,2.01e-15,25;CL:0000988,5.62e-12,32;CL:0002032,5.62e-12,32;CL:0000037,5.62e-12,32;CL:0000837,5.62e-12,32;CL:0000815,2.09e-09,1;CL:0000792,2.09e-09,1;CL:0000625,4.39e-09,1;CL:0000945,5.27e-09,1;CL:0000236,5.27e-09,1;CL:0000826,5.27e-09,1;CL:0002320,3.28e-08,46;CL:0000134,3.28e-08,46;CL:0000219,6.30e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,2.07e-12,6;DOID:0060100,2.51e-11,3;DOID:4045,2.51e-11,3|ontology_enrichment_uberon=UBERON:0002370!3.15e-10!23;UBERON:0000974!3.15e-10!23;UBERON:0004807!3.15e-10!23;UBERON:0005058!3.15e-10!23;UBERON:0003351!3.15e-10!23;UBERON:0009113!3.15e-10!23;UBERON:0003295!3.15e-10!23;UBERON:0009722!3.15e-10!23;UBERON:0005562!3.15e-10!23;UBERON:0007690!3.15e-10!23;UBERON:0006562!1.18e-09!24;UBERON:0003408!1.18e-09!24;UBERON:0001557!1.18e-09!24;UBERON:0001042!1.18e-09!24;UBERON:0008814!1.18e-09!24;UBERON:0009145!1.18e-09!24;UBERON:0002384!1.65e-09!46;UBERON:0000072!3.35e-08!27;UBERON:0004177!2.10e-07!29;UBERON:0002390!9.73e-07!45;UBERON:0003061!9.73e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.28e-08,46|phase1_expression=0,0.348975407639361,0,0.60492842261366,0.500895729946347,0,0,2.7115897922731,0.563154888606667,0.70219357896598,0.34243593645101,0.159544317990673,4.62241970814255,2.97229368224591,0,0,0,0,0.137114433605739,0,0,0.695036658406197,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,2.54012269383853,0,0,0,0,0,1.25559489221072,2.3440060335714,0,4.70585190424811,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,1.34226084846189,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.69975726161829,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0.738447635872886,0.201932899896295,0.15241361331,0,0,0.288635524920988,0.935015217452552,0,0,0.538283139656854,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr19:7281173..7281203,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:7281173..7281203,+ | |||
|description=CAGE_peak_at_chr19:7281173..7281203,+ | |||
|id=chr19:7281173..7281203,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.05e-19!12;CL:0000084!1.20e-17!11;CL:0000827!1.20e-17!11;CL:0000542!1.69e-17!13;CL:0000051!1.69e-17!13;CL:0000791!5.85e-15!9;CL:0000789!5.85e-15!9;CL:0002420!5.85e-15!9;CL:0002419!5.85e-15!9;CL:0000790!5.85e-15!9;CL:0000738!7.92e-15!17;CL:0002087!7.92e-15!17;CL:0000988!2.35e-14!32;CL:0002032!2.35e-14!32;CL:0000037!2.35e-14!32;CL:0000566!2.35e-14!32;CL:0000837!2.35e-14!32;CL:0000624!2.30e-13!8;CL:0002031!4.08e-12!25;CL:0000893!4.98e-10!6;CL:0002489!4.98e-10!6;CL:0000898!4.98e-10!6;CL:0000809!4.98e-10!6;CL:0000810!4.98e-10!6;CL:0000895!4.98e-10!6;CL:0000808!4.98e-10!6;CL:0000894!4.98e-10!6;CL:0000806!4.98e-10!6;CL:0000807!4.98e-10!6;CL:0000805!4.98e-10!6;CL:0002425!4.98e-10!6;CL:0002436!4.98e-10!6;CL:0002427!4.98e-10!6;CL:0002428!4.98e-10!6;CL:0002429!4.98e-10!6;CL:0002433!4.98e-10!6;CL:0002431!4.98e-10!6;CL:0002432!4.98e-10!6;CL:0002320!1.65e-09!46;CL:0000134!1.65e-09!46;CL:0000063!1.66e-07!66;CL:0000219!2.49e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.10e-24,12;CL:0000791,1.38e-22,9;CL:0000789,1.38e-22,9;CL:0002420,1.38e-22,9;CL:0002419,1.38e-22,9;CL:0000790,1.38e-22,9;CL:0000542,4.25e-22,13;CL:0000051,4.25e-22,13;CL:0000084,1.64e-18,11;CL:0000827,1.64e-18,11;CL:0000738,6.96e-17,17;CL:0002087,6.96e-17,17;CL:0000624,9.63e-17,8;CL:0002031,2.01e-15,25;CL:0000988,5.62e-12,32;CL:0002032,5.62e-12,32;CL:0000037,5.62e-12,32;CL:0000837,5.62e-12,32;CL:0000815,2.09e-09,1;CL:0000792,2.09e-09,1;CL:0000625,4.39e-09,1;CL:0000945,5.27e-09,1;CL:0000236,5.27e-09,1;CL:0000826,5.27e-09,1;CL:0002320,3.28e-08,46;CL:0000134,3.28e-08,46;CL:0000219,6.30e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.07e-12,6;DOID:0060100,2.51e-11,3;DOID:4045,2.51e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.15e-10!23;UBERON:0000974!3.15e-10!23;UBERON:0004807!3.15e-10!23;UBERON:0005058!3.15e-10!23;UBERON:0003351!3.15e-10!23;UBERON:0009113!3.15e-10!23;UBERON:0003295!3.15e-10!23;UBERON:0009722!3.15e-10!23;UBERON:0005562!3.15e-10!23;UBERON:0007690!3.15e-10!23;UBERON:0006562!1.18e-09!24;UBERON:0003408!1.18e-09!24;UBERON:0001557!1.18e-09!24;UBERON:0001042!1.18e-09!24;UBERON:0008814!1.18e-09!24;UBERON:0009145!1.18e-09!24;UBERON:0002384!1.65e-09!46;UBERON:0000072!3.35e-08!27;UBERON:0004177!2.10e-07!29;UBERON:0002390!9.73e-07!45;UBERON:0003061!9.73e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.28e-08,46 | |||
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0.500895729946347,0,0,2.7115897922731,0.563154888606667,0.70219357896598,0.34243593645101,0.159544317990673,4.62241970814255,2.97229368224591,0,0,0,0,0.137114433605739,0,0,0.695036658406197,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,2.54012269383853,0,0,0,0,0,1.25559489221072,2.3440060335714,0,4.70585190424811,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,1.34226084846189,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.69975726161829,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0.738447635872886,0.201932899896295,0.15241361331,0,0,0.288635524920988,0.935015217452552,0,0,0.538283139656854,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:7281173..7281203,+ | |||
}} |
Latest revision as of 13:11, 4 August 2015
Short description: | p@chr19:7281173..7281203, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7281173..7281203, + |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.10e-24 | 12 |
mature alpha-beta T cell | 1.38e-22 | 9 |
alpha-beta T cell | 1.38e-22 | 9 |
immature T cell | 1.38e-22 | 9 |
mature T cell | 1.38e-22 | 9 |
immature alpha-beta T cell | 1.38e-22 | 9 |
lymphocyte | 4.25e-22 | 13 |
common lymphoid progenitor | 4.25e-22 | 13 |
T cell | 1.64e-18 | 11 |
pro-T cell | 1.64e-18 | 11 |
leukocyte | 6.96e-17 | 17 |
nongranular leukocyte | 6.96e-17 | 17 |
CD4-positive, alpha-beta T cell | 9.63e-17 | 8 |
hematopoietic lineage restricted progenitor cell | 2.01e-15 | 25 |
hematopoietic cell | 5.62e-12 | 32 |
hematopoietic oligopotent progenitor cell | 5.62e-12 | 32 |
hematopoietic stem cell | 5.62e-12 | 32 |
hematopoietic multipotent progenitor cell | 5.62e-12 | 32 |
regulatory T cell | 2.09e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.09e-09 | 1 |
CD8-positive, alpha-beta T cell | 4.39e-09 | 1 |
lymphocyte of B lineage | 5.27e-09 | 1 |
B cell | 5.27e-09 | 1 |
pro-B cell | 5.27e-09 | 1 |
connective tissue cell | 3.28e-08 | 46 |
mesenchymal cell | 3.28e-08 | 46 |
motile cell | 6.30e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.28e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.07e-12 | 6 |
musculoskeletal system cancer | 2.51e-11 | 3 |
muscle cancer | 2.51e-11 | 3 |