FFCP PHASE1:Mm9::chr2:165060189..165060250,-: Difference between revisions
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{{FFCP|EntrezGene=104010|HGNC=|MCL_coexpression_id=1|UniProt=Q9WTP5|association_with_transcript=0bp_to_NM_174988,uc008nxc.2_5end|description=CAGE_peak_1_at_Cdh22_5end|id=chr2:165060189..165060250,-|ontology_enrichment_celltype=CL:0000117!1.54e-12!23;CL:0000337!1.54e-12!23;CL:0000221!1.60e-10!44;CL:0000133!1.60e-10!44;CL:0002319!1.77e-10!43;CL:0000055!1.26e-07!50;CL:0000540!3.99e-07!33;CL:0000047!3.99e-07!33;CL:0000031!3.99e-07!33;CL:0000404!3.99e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.19e-15,23;CL:0000337,3.19e-15,23;CL:0002319,2.98e-13,43;CL:0000221,9.36e-13,44;CL:0000133,9.36e-13,44;CL:0000540,9.14e-09,33;CL:0000047,9.14e-09,33;CL:0000031,9.14e-09,33;CL:0000404,9.14e-09,33;CL:0002453,7.98e-08,8;CL:0000393,2.97e-07,39;CL:0000211,2.97e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.22e-29!63;UBERON:0001017!9.22e-29!73;UBERON:0005743!9.22e-29!73;UBERON:0000073!2.13e-28!75;UBERON:0001016!2.13e-28!75;UBERON:0004121!2.21e-28!102;UBERON:0000924!2.21e-28!102;UBERON:0006601!2.21e-28!102;UBERON:0001049!5.42e-28!52;UBERON:0005068!5.42e-28!52;UBERON:0006241!5.42e-28!52;UBERON:0007135!5.42e-28!52;UBERON:0002346!6.40e-28!71;UBERON:0003075!6.40e-28!71;UBERON:0007284!6.40e-28!71;UBERON:0000955!1.87e-26!50;UBERON:0006238!1.87e-26!50;UBERON:0002616!1.32e-25!49;UBERON:0003056!1.48e-21!49;UBERON:0003080!1.97e-19!40;UBERON:0002780!1.17e-18!39;UBERON:0001890!1.17e-18!39;UBERON:0006240!1.17e-18!39;UBERON:0002020!1.61e-18!34;UBERON:0007811!3.10e-16!86;UBERON:0002791!2.83e-15!29;UBERON:0003528!2.83e-15!29;UBERON:0001893!2.83e-15!29;UBERON:0000153!1.84e-14!94;UBERON:0000956!1.62e-10!21;UBERON:0001869!1.62e-10!21;UBERON:0000203!1.62e-10!21;UBERON:0002619!6.09e-10!17;UBERON:0003076!4.21e-09!12;UBERON:0003057!4.21e-09!12;UBERON:0002021!1.23e-07!10;UBERON:0000411!1.23e-07!10;UBERON:0001950!1.23e-07!10;UBERON:0004111!5.51e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.94e-40,73;UBERON:0000073,1.41e-38,54;UBERON:0001016,1.78e-38,75;UBERON:0002346,6.14e-38,64;UBERON:0003075,6.14e-38,64;UBERON:0007284,6.14e-38,64;UBERON:0001049,1.10e-36,52;UBERON:0005068,1.10e-36,52;UBERON:0006241,1.10e-36,52;UBERON:0007135,1.10e-36,52;UBERON:0004121,7.44e-36,95;UBERON:0000924,7.44e-36,95;UBERON:0006601,7.44e-36,95;UBERON:0010371,3.63e-31,73;UBERON:0000955,3.89e-31,47;UBERON:0006238,3.89e-31,47;UBERON:0002616,7.58e-30,46;UBERON:0003056,5.26e-27,49;UBERON:0002020,1.50e-23,34;UBERON:0010314,2.28e-23,92;UBERON:0003080,2.54e-23,40;UBERON:0002780,3.83e-22,39;UBERON:0001890,3.83e-22,39;UBERON:0006240,3.83e-22,39;UBERON:0003528,1.92e-18,29;UBERON:0002791,1.92e-18,29;UBERON:0001893,1.92e-18,29;UBERON:0003076,5.24e-14,12;UBERON:0003057,5.24e-14,12;UBERON:0002619,1.24e-12,17;UBERON:0002021,1.37e-11,10;UBERON:0000411,1.37e-11,10;UBERON:0001950,1.37e-11,10;UBERON:0000025,1.81e-11,114;UBERON:0000956,4.32e-11,21;UBERON:0001869,4.32e-11,21;UBERON:0000203,4.32e-11,21;UBERON:0004111,1.91e-10,122;UBERON:0002420,4.86e-09,8;UBERON:0007245,4.86e-09,8;UBERON:0010009,4.86e-09,8;UBERON:0010011,4.86e-09,8;UBERON:0000454,4.86e-09,8;UBERON:0004733,8.85e-08,6;UBERON:0004732,8.85e-08,6;UBERON:0002028,8.85e-08,6;UBERON:0007277,8.85e-08,6;UBERON:0002240,9.60e-08,6;UBERON:0005174,9.60e-08,6;UBERON:0001137,9.60e-08,6|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,2.18025156380447,3.73466510648602,3.11087838518853,2.09979632438044,4.31257693094915,0,0,0,0,0,1.03134418455488,10.5204559646991,13.2247744818008,6.97214543856797,1.69422266034566,0,0,0.988866362566974,0,8.08920298399693,5.37905627450176,0.311068836925433,0.540023753326763,0.841299845405528,11.4260393761521,8.61387309711293,1.46988959057945,1.72521847832825,0.919218786610021,5.50579404996943,6.12899222808901,7.98753972932466,5.67111037239834,5.76372154695181,4.68822033501084,9.77140496504833,11.8180148106653,9.0150966188318,8.54422897873636,6.83384067835694,4.47358669980721,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,2.22663208597237,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.879666139307728,0,0,0,0,0.220841518460394,0,0,16.9812862266697,16.7557365450764,0,0,0,0.127070227073065,13.1815762676244,4.57500602818627,3.64397621127307,12.3415267336516,8.95004100656157,6.85700547046548,7.62533936418461,0.101839363850316,0.124406970610093,0,0.210441855886474,0,1.14951052216736,2.52086981727489,2.56198190320716,4.96666443804693,3.20284300712124,2.71735001223214,1.81092359517311,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0.696504333044333,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.134206418760372,4.20579897128254,0.823236899034275,0,0,0,0.696710015581316,0.902072229254653,0.403367049246685,0.667134131534611,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0.758671603812327,0.342745537829186,0,0.407302655690628,0.387904974335251,0.49095073923223,0.948548056863859,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.651859905768103,0.848725428875941,1.40814148973101,0.670025029767263,0,0.195133647857799,1.41871629695572,0.8858587585951,0.478364305972461,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,10.7568895291821,9.02529986759964,0.163934945376675,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0.790575555893047,15.1021018718249,0.425820255624806,0.534196811001766,0,1.48473110675282,0,0.728341908464944,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,1.68166288917581,1.07168517515796,1.24138163549592,1.07021290561242,1.48094118541909,2.13125464380219,0,0,0.220528398054962,0,0.645857706783622,0.180938774784468,0,0,0,13.5360470467672,0,0.206386867963223,0,0,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,0,0.609958401380546,0.540026704109006,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0,0,0,0.228620419965,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.906921534460845,0,0.986852422704233,0.167884616364078,1.73870634628971,0,0,0,0,3.95326289831947,7.82552902062201,6.87474616127276,7.90524638780963,8.90607275701835,7.55393897389701,10.8003600037089,6.75481804836331,9.5159905886683,10.8729665467882,0.31136204275253,2.79317411380722,1.70733605754134,1.21553358534147,0.419226325255965,0.551530525350042,1.11123363900808,1.44224540067226,0.962757628775446,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,0.960377286073039,0.746661096422973,1.90517476513229,0.695305955669133,0.578727661391115,0.412085900803307,1.03039244094078,0.685738504770831,0.887379030796687,1.43061713968393,0.581385666529314,0.564656282491984,1.01537529470012,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,1.18635018124174,0.788035859004508,0.818462086339379,1.39443157067369,0.385813221962283,3.74715866906919,0.935726433781634,1.07435527024149,0.382576664137687,0.220591419119515,0|short_description=p1@Cdh22}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:104010 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WTP5 | |||
|association_with_transcript=0bp_to_NM_174988,uc008nxc.2_5end | |||
|cluster_id=chr2:165060189..165060250,- | |||
|description=CAGE_peak_1_at_Cdh22_5end | |||
|id=chr2:165060189..165060250,- | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-12!23;CL:0000337!1.54e-12!23;CL:0000221!1.60e-10!44;CL:0000133!1.60e-10!44;CL:0002319!1.77e-10!43;CL:0000055!1.26e-07!50;CL:0000540!3.99e-07!33;CL:0000047!3.99e-07!33;CL:0000031!3.99e-07!33;CL:0000404!3.99e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.19e-15,23;CL:0000337,3.19e-15,23;CL:0002319,2.98e-13,43;CL:0000221,9.36e-13,44;CL:0000133,9.36e-13,44;CL:0000540,9.14e-09,33;CL:0000047,9.14e-09,33;CL:0000031,9.14e-09,33;CL:0000404,9.14e-09,33;CL:0002453,7.98e-08,8;CL:0000393,2.97e-07,39;CL:0000211,2.97e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.22e-29!63;UBERON:0001017!9.22e-29!73;UBERON:0005743!9.22e-29!73;UBERON:0000073!2.13e-28!75;UBERON:0001016!2.13e-28!75;UBERON:0004121!2.21e-28!102;UBERON:0000924!2.21e-28!102;UBERON:0006601!2.21e-28!102;UBERON:0001049!5.42e-28!52;UBERON:0005068!5.42e-28!52;UBERON:0006241!5.42e-28!52;UBERON:0007135!5.42e-28!52;UBERON:0002346!6.40e-28!71;UBERON:0003075!6.40e-28!71;UBERON:0007284!6.40e-28!71;UBERON:0000955!1.87e-26!50;UBERON:0006238!1.87e-26!50;UBERON:0002616!1.32e-25!49;UBERON:0003056!1.48e-21!49;UBERON:0003080!1.97e-19!40;UBERON:0002780!1.17e-18!39;UBERON:0001890!1.17e-18!39;UBERON:0006240!1.17e-18!39;UBERON:0002020!1.61e-18!34;UBERON:0007811!3.10e-16!86;UBERON:0002791!2.83e-15!29;UBERON:0003528!2.83e-15!29;UBERON:0001893!2.83e-15!29;UBERON:0000153!1.84e-14!94;UBERON:0000956!1.62e-10!21;UBERON:0001869!1.62e-10!21;UBERON:0000203!1.62e-10!21;UBERON:0002619!6.09e-10!17;UBERON:0003076!4.21e-09!12;UBERON:0003057!4.21e-09!12;UBERON:0002021!1.23e-07!10;UBERON:0000411!1.23e-07!10;UBERON:0001950!1.23e-07!10;UBERON:0004111!5.51e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.94e-40,73;UBERON:0000073,1.41e-38,54;UBERON:0001016,1.78e-38,75;UBERON:0002346,6.14e-38,64;UBERON:0003075,6.14e-38,64;UBERON:0007284,6.14e-38,64;UBERON:0001049,1.10e-36,52;UBERON:0005068,1.10e-36,52;UBERON:0006241,1.10e-36,52;UBERON:0007135,1.10e-36,52;UBERON:0004121,7.44e-36,95;UBERON:0000924,7.44e-36,95;UBERON:0006601,7.44e-36,95;UBERON:0010371,3.63e-31,73;UBERON:0000955,3.89e-31,47;UBERON:0006238,3.89e-31,47;UBERON:0002616,7.58e-30,46;UBERON:0003056,5.26e-27,49;UBERON:0002020,1.50e-23,34;UBERON:0010314,2.28e-23,92;UBERON:0003080,2.54e-23,40;UBERON:0002780,3.83e-22,39;UBERON:0001890,3.83e-22,39;UBERON:0006240,3.83e-22,39;UBERON:0003528,1.92e-18,29;UBERON:0002791,1.92e-18,29;UBERON:0001893,1.92e-18,29;UBERON:0003076,5.24e-14,12;UBERON:0003057,5.24e-14,12;UBERON:0002619,1.24e-12,17;UBERON:0002021,1.37e-11,10;UBERON:0000411,1.37e-11,10;UBERON:0001950,1.37e-11,10;UBERON:0000025,1.81e-11,114;UBERON:0000956,4.32e-11,21;UBERON:0001869,4.32e-11,21;UBERON:0000203,4.32e-11,21;UBERON:0004111,1.91e-10,122;UBERON:0002420,4.86e-09,8;UBERON:0007245,4.86e-09,8;UBERON:0010009,4.86e-09,8;UBERON:0010011,4.86e-09,8;UBERON:0000454,4.86e-09,8;UBERON:0004733,8.85e-08,6;UBERON:0004732,8.85e-08,6;UBERON:0002028,8.85e-08,6;UBERON:0007277,8.85e-08,6;UBERON:0002240,9.60e-08,6;UBERON:0005174,9.60e-08,6;UBERON:0001137,9.60e-08,6 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,2.18025156380447,3.73466510648602,3.11087838518853,2.09979632438044,4.31257693094915,0,0,0,0,0,1.03134418455488,10.5204559646991,13.2247744818008,6.97214543856797,1.69422266034566,0,0,0.988866362566974,0,8.08920298399693,5.37905627450176,0.311068836925433,0.540023753326763,0.841299845405528,11.4260393761521,8.61387309711293,1.46988959057945,1.72521847832825,0.919218786610021,5.50579404996943,6.12899222808901,7.98753972932466,5.67111037239834,5.76372154695181,4.68822033501084,9.77140496504833,11.8180148106653,9.0150966188318,8.54422897873636,6.83384067835694,4.47358669980721,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,2.22663208597237,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.879666139307728,0,0,0,0,0.220841518460394,0,0,16.9812862266697,16.7557365450764,0,0,0,0.127070227073065,13.1815762676244,4.57500602818627,3.64397621127307,12.3415267336516,8.95004100656157,6.85700547046548,7.62533936418461,0.101839363850316,0.124406970610093,0,0.210441855886474,0,1.14951052216736,2.52086981727489,2.56198190320716,4.96666443804693,3.20284300712124,2.71735001223214,1.81092359517311,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0.696504333044333,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.134206418760372,4.20579897128254,0.823236899034275,0,0,0,0.696710015581316,0.902072229254653,0.403367049246685,0.667134131534611,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0.758671603812327,0.342745537829186,0,0.407302655690628,0.387904974335251,0.49095073923223,0.948548056863859,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.651859905768103,0.848725428875941,1.40814148973101,0.670025029767263,0,0.195133647857799,1.41871629695572,0.8858587585951,0.478364305972461,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,10.7568895291821,9.02529986759964,0.163934945376675,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0.790575555893047,15.1021018718249,0.425820255624806,0.534196811001766,0,1.48473110675282,0,0.728341908464944,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,1.68166288917581,1.07168517515796,1.24138163549592,1.07021290561242,1.48094118541909,2.13125464380219,0,0,0.220528398054962,0,0.645857706783622,0.180938774784468,0,0,0,13.5360470467672,0,0.206386867963223,0,0,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,0,0.609958401380546,0.540026704109006,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0,0,0,0.228620419965,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.906921534460845,0,0.986852422704233,0.167884616364078,1.73870634628971,0,0,0,0,3.95326289831947,7.82552902062201,6.87474616127276,7.90524638780963,8.90607275701835,7.55393897389701,10.8003600037089,6.75481804836331,9.5159905886683,10.8729665467882,0.31136204275253,2.79317411380722,1.70733605754134,1.21553358534147,0.419226325255965,0.551530525350042,1.11123363900808,1.44224540067226,0.962757628775446,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,0.960377286073039,0.746661096422973,1.90517476513229,0.695305955669133,0.578727661391115,0.412085900803307,1.03039244094078,0.685738504770831,0.887379030796687,1.43061713968393,0.581385666529314,0.564656282491984,1.01537529470012,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,1.18635018124174,0.788035859004508,0.818462086339379,1.39443157067369,0.385813221962283,3.74715866906919,0.935726433781634,1.07435527024149,0.382576664137687,0.220591419119515,0 | |||
|short_description=p1@Cdh22 | |||
}} |
Revision as of 13:27, 4 August 2015
Short description: | p1@Cdh22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdh22_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_174988, uc008nxc.2_5end |
EntrezGene: | 104010 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.19e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.19e-15 | 23 |
neural cell | 2.98e-13 | 43 |
ectodermal cell | 9.36e-13 | 44 |
neurectodermal cell | 9.36e-13 | 44 |
neuron | 9.14e-09 | 33 |
neuronal stem cell | 9.14e-09 | 33 |
neuroblast | 9.14e-09 | 33 |
electrically signaling cell | 9.14e-09 | 33 |
oligodendrocyte precursor cell | 7.98e-08 | 8 |
electrically responsive cell | 2.97e-07 | 39 |
electrically active cell | 2.97e-07 | 39 |