FFCP PHASE1:Mm9::chr4:12099117..12099171,-: Difference between revisions
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{{FFCP|EntrezGene=68099|HGNC=|MCL_coexpression_id=13|UniProt=Q8BP22|association_with_transcript=0bp_to_ENSMUST00000087052,ENSMUST00000108285,ENSMUST00000126808,NM_026558,uc008saq.2,uc008sar.2,uc012daq.1_5end|description=CAGE_peak_2_at_Fam92a_5end|id=chr4:12099117..12099171,-|ontology_enrichment_celltype=CL:0000117!4.45e-13!23;CL:0000337!4.45e-13!23;CL:0000221!2.20e-10!44;CL:0000133!2.20e-10!44;CL:0000540!2.42e-10!33;CL:0000047!2.42e-10!33;CL:0000031!2.42e-10!33;CL:0000404!2.42e-10!33;CL:0002319!3.61e-10!43;CL:0000393!2.00e-09!39;CL:0000211!2.00e-09!39;CL:0000055!6.40e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.99e-13,23;CL:0000337,3.99e-13,23;CL:0000221,2.03e-10,44;CL:0000133,2.03e-10,44;CL:0000540,2.23e-10,33;CL:0000047,2.23e-10,33;CL:0000031,2.23e-10,33;CL:0000404,2.23e-10,33;CL:0002319,3.33e-10,43;CL:0000393,1.86e-09,39;CL:0000211,1.86e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.13e-26!73;UBERON:0005743!6.13e-26!73;UBERON:0000073!1.56e-24!75;UBERON:0001016!1.56e-24!75;UBERON:0001049!1.53e-23!52;UBERON:0005068!1.53e-23!52;UBERON:0006241!1.53e-23!52;UBERON:0007135!1.53e-23!52;UBERON:0000955!2.83e-22!50;UBERON:0006238!2.83e-22!50;UBERON:0002616!9.44e-22!49;UBERON:0000033!2.00e-20!63;UBERON:0004121!8.39e-20!102;UBERON:0000924!8.39e-20!102;UBERON:0006601!8.39e-20!102;UBERON:0003080!1.08e-19!40;UBERON:0002346!1.13e-19!71;UBERON:0003075!1.13e-19!71;UBERON:0007284!1.13e-19!71;UBERON:0002020!1.24e-19!34;UBERON:0002780!2.97e-19!39;UBERON:0001890!2.97e-19!39;UBERON:0006240!2.97e-19!39;UBERON:0003056!4.37e-18!49;UBERON:0002791!1.14e-16!29;UBERON:0003528!1.14e-16!29;UBERON:0001893!1.14e-16!29;UBERON:0000153!2.63e-12!94;UBERON:0000956!2.75e-12!21;UBERON:0001869!2.75e-12!21;UBERON:0000203!2.75e-12!21;UBERON:0007811!2.32e-10!86;UBERON:0002619!3.52e-10!17;UBERON:0002021!5.22e-08!10;UBERON:0000411!5.22e-08!10;UBERON:0001950!5.22e-08!10;UBERON:0000025!1.89e-07!114;UBERON:0004111!7.71e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.87e-26,73;UBERON:0000073,5.48e-25,54;UBERON:0001016,1.26e-24,75;UBERON:0001049,1.24e-23,52;UBERON:0005068,1.24e-23,52;UBERON:0006241,1.24e-23,52;UBERON:0007135,1.24e-23,52;UBERON:0002346,1.39e-21,64;UBERON:0003075,1.39e-21,64;UBERON:0007284,1.39e-21,64;UBERON:0004121,5.28e-21,95;UBERON:0000924,5.28e-21,95;UBERON:0006601,5.28e-21,95;UBERON:0000955,9.03e-21,47;UBERON:0006238,9.03e-21,47;UBERON:0010371,1.93e-20,73;UBERON:0002616,2.96e-20,46;UBERON:0003080,9.10e-20,40;UBERON:0002020,1.05e-19,34;UBERON:0002780,2.51e-19,39;UBERON:0001890,2.51e-19,39;UBERON:0006240,2.51e-19,39;UBERON:0003056,3.74e-18,49;UBERON:0010314,1.12e-17,92;UBERON:0003528,9.88e-17,29;UBERON:0002791,9.88e-17,29;UBERON:0001893,9.88e-17,29;UBERON:0000956,2.49e-12,21;UBERON:0001869,2.49e-12,21;UBERON:0000203,2.49e-12,21;UBERON:0002619,3.25e-10,17;UBERON:0002021,4.91e-08,10;UBERON:0000411,4.91e-08,10;UBERON:0001950,4.91e-08,10;UBERON:0000025,1.47e-07,114;UBERON:0004111,6.75e-07,122|phase1_expression=27.8658993962341,0.348975407639361,0,0,0,0.671517087647559,0.700837921786577,1.93684985162364,0.140788722151667,0,0.171217968225505,0.159544317990673,0.342401459862411,0.262261207256992,0.333109761815663,0.607425802169478,0,0,0.411343300817216,0,7.82398269389842,1.19149141441062,1.82839852397255,0.159992422793407,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,1.10865255327652,1.27006134691926,0,0,2.02196133825892,2.99222361645286,0.816677425049476,0.418531630736908,0,0,0,0,0.971020706062307,11.8343008897043,9.83356232829291,9.17733760808408,34.4252191513137,7.19483016055474,11.2039953194581,8.74934545834275,16.6583841734181,12.9377307928474,0.167782606057736,1.45072428402269,1.00828139742739,4.3734104126111,5.73066879877513,4.12537673821954,23.6710259205729,34.9134046319542,29.1562445612842,8.80995783379743,14.2287167377782,1.3498495759221,0.988866362566974,1.4209602298922,9.28760342607055,9.60545763303886,23.9523004432583,22.680997639724,23.3460707100034,31.1359573000146,34.4554923884517,23.2732518508413,22.5236856892855,23.8996884518605,22.0231761998777,24.0052195600153,19.5080297235429,21.101806036831,29.1845583091687,21.3574481928272,20.9387249251036,23.6360296213306,26.2812986176113,28.8736013764194,23.2065839702538,23.2999307281626,1.36307147999731,3.02286240427142,4.34796733052517,0.860423876981386,0,0,0,0,2.24711072210803,4.94247935476367,1.03914401841148,3.88673531961374,12.6759077799012,1.28326477414318,0,0,1.94841936910093,1.77351905832569,1.01104889002957,1.94112595522402,1.8125651855302,6.08612770165782,8.32729568477452,8.22056791442781,7.14908041493781,6.0289056221049,5.64425794251383,3.14166478324189,2.47194967734374,2.89198713839823,0.884610551949874,5.50007289821191,2.20841518460394,1.93950101254089,1.86391761218122,8.49064311333487,7.74952815209784,0.510914110417183,2.15667224110656,0.599902730993408,2.66847476853436,18.2744580073884,36.6000482254901,36.8167251690693,32.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68099 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BP22 | |||
|association_with_transcript=0bp_to_ENSMUST00000087052,ENSMUST00000108285,ENSMUST00000126808,NM_026558,uc008saq.2,uc008sar.2,uc012daq.1_5end | |||
|cluster_id=chr4:12099117..12099171,- | |||
|description=CAGE_peak_2_at_Fam92a_5end | |||
|id=chr4:12099117..12099171,- | |||
|ontology_enrichment_celltype=CL:0000117!4.45e-13!23;CL:0000337!4.45e-13!23;CL:0000221!2.20e-10!44;CL:0000133!2.20e-10!44;CL:0000540!2.42e-10!33;CL:0000047!2.42e-10!33;CL:0000031!2.42e-10!33;CL:0000404!2.42e-10!33;CL:0002319!3.61e-10!43;CL:0000393!2.00e-09!39;CL:0000211!2.00e-09!39;CL:0000055!6.40e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.99e-13,23;CL:0000337,3.99e-13,23;CL:0000221,2.03e-10,44;CL:0000133,2.03e-10,44;CL:0000540,2.23e-10,33;CL:0000047,2.23e-10,33;CL:0000031,2.23e-10,33;CL:0000404,2.23e-10,33;CL:0002319,3.33e-10,43;CL:0000393,1.86e-09,39;CL:0000211,1.86e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.13e-26!73;UBERON:0005743!6.13e-26!73;UBERON:0000073!1.56e-24!75;UBERON:0001016!1.56e-24!75;UBERON:0001049!1.53e-23!52;UBERON:0005068!1.53e-23!52;UBERON:0006241!1.53e-23!52;UBERON:0007135!1.53e-23!52;UBERON:0000955!2.83e-22!50;UBERON:0006238!2.83e-22!50;UBERON:0002616!9.44e-22!49;UBERON:0000033!2.00e-20!63;UBERON:0004121!8.39e-20!102;UBERON:0000924!8.39e-20!102;UBERON:0006601!8.39e-20!102;UBERON:0003080!1.08e-19!40;UBERON:0002346!1.13e-19!71;UBERON:0003075!1.13e-19!71;UBERON:0007284!1.13e-19!71;UBERON:0002020!1.24e-19!34;UBERON:0002780!2.97e-19!39;UBERON:0001890!2.97e-19!39;UBERON:0006240!2.97e-19!39;UBERON:0003056!4.37e-18!49;UBERON:0002791!1.14e-16!29;UBERON:0003528!1.14e-16!29;UBERON:0001893!1.14e-16!29;UBERON:0000153!2.63e-12!94;UBERON:0000956!2.75e-12!21;UBERON:0001869!2.75e-12!21;UBERON:0000203!2.75e-12!21;UBERON:0007811!2.32e-10!86;UBERON:0002619!3.52e-10!17;UBERON:0002021!5.22e-08!10;UBERON:0000411!5.22e-08!10;UBERON:0001950!5.22e-08!10;UBERON:0000025!1.89e-07!114;UBERON:0004111!7.71e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.87e-26,73;UBERON:0000073,5.48e-25,54;UBERON:0001016,1.26e-24,75;UBERON:0001049,1.24e-23,52;UBERON:0005068,1.24e-23,52;UBERON:0006241,1.24e-23,52;UBERON:0007135,1.24e-23,52;UBERON:0002346,1.39e-21,64;UBERON:0003075,1.39e-21,64;UBERON:0007284,1.39e-21,64;UBERON:0004121,5.28e-21,95;UBERON:0000924,5.28e-21,95;UBERON:0006601,5.28e-21,95;UBERON:0000955,9.03e-21,47;UBERON:0006238,9.03e-21,47;UBERON:0010371,1.93e-20,73;UBERON:0002616,2.96e-20,46;UBERON:0003080,9.10e-20,40;UBERON:0002020,1.05e-19,34;UBERON:0002780,2.51e-19,39;UBERON:0001890,2.51e-19,39;UBERON:0006240,2.51e-19,39;UBERON:0003056,3.74e-18,49;UBERON:0010314,1.12e-17,92;UBERON:0003528,9.88e-17,29;UBERON:0002791,9.88e-17,29;UBERON:0001893,9.88e-17,29;UBERON:0000956,2.49e-12,21;UBERON:0001869,2.49e-12,21;UBERON:0000203,2.49e-12,21;UBERON:0002619,3.25e-10,17;UBERON:0002021,4.91e-08,10;UBERON:0000411,4.91e-08,10;UBERON:0001950,4.91e-08,10;UBERON:0000025,1.47e-07,114;UBERON:0004111,6.75e-07,122 | |||
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| |||
|short_description=p2@Fam92a | |||
}} |
Revision as of 16:50, 4 August 2015
Short description: | p2@Fam92a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam92a_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000087052, ENSMUST00000108285, ENSMUST00000126808, NM_026558, uc008saq.2, uc008sar.2, uc012daq.1_5end |
EntrezGene: | 68099 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.99e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.99e-13 | 23 |
ectodermal cell | 2.03e-10 | 44 |
neurectodermal cell | 2.03e-10 | 44 |
neuron | 2.23e-10 | 33 |
neuronal stem cell | 2.23e-10 | 33 |
neuroblast | 2.23e-10 | 33 |
electrically signaling cell | 2.23e-10 | 33 |
neural cell | 3.33e-10 | 43 |
electrically responsive cell | 1.86e-09 | 39 |
electrically active cell | 1.86e-09 | 39 |