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FFCP PHASE1:Mm9::chr10:77365212..77365274,-: Difference between revisions

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{{FFCP|EntrezGene=237387|HGNC=|MCL_coexpression_id=8|UniProt=P59034,Q543Z4|association_with_transcript=6bp_to_ENSMUST00000057608,NM_145152,uc007fwi.2_5end|description=CAGE_peak_1_at_Lrrc3_5end|id=chr10:77365212..77365274,-|ontology_enrichment_celltype=CL:0000540!4.01e-10!33;CL:0000047!4.01e-10!33;CL:0000031!4.01e-10!33;CL:0000404!4.01e-10!33;CL:0000117!1.71e-07!23;CL:0000337!1.71e-07!23;CL:0000393!3.28e-07!39;CL:0000211!3.28e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.43e-10,33;CL:0000047,3.43e-10,33;CL:0000031,3.43e-10,33;CL:0000404,3.43e-10,33;CL:0000393,1.85e-07,39;CL:0000211,1.85e-07,39;CL:0000117,2.50e-07,23;CL:0000337,2.50e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!6.24e-15!23;UBERON:0009856!6.24e-15!23;UBERON:0002107!1.40e-14!22;UBERON:0007499!1.40e-14!22;UBERON:0006925!1.40e-14!22;UBERON:0009497!1.40e-14!22;UBERON:0000015!1.40e-14!22;UBERON:0002423!1.40e-14!22;UBERON:0006235!1.40e-14!22;UBERON:0008835!1.40e-14!22;UBERON:0003894!1.40e-14!22;UBERON:0004161!1.40e-14!22;UBERON:0008836!1.40e-14!22;UBERON:0002365!1.45e-13!25;UBERON:0002330!1.45e-13!25;UBERON:0001017!2.05e-10!73;UBERON:0005743!2.05e-10!73;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0004121!3.25e-09!102;UBERON:0000924!3.25e-09!102;UBERON:0006601!3.25e-09!102;UBERON:0002020!4.25e-09!34;UBERON:0005172!4.70e-09!49;UBERON:0005173!4.70e-09!49;UBERON:0002417!4.70e-09!49;UBERON:0000916!4.70e-09!49;UBERON:0000468!1.06e-08!333;UBERON:0002346!2.09e-08!71;UBERON:0003075!2.09e-08!71;UBERON:0007284!2.09e-08!71;UBERON:0000025!1.18e-07!114;UBERON:0004111!3.84e-07!122;UBERON:0001049!4.49e-07!52;UBERON:0005068!4.49e-07!52;UBERON:0006241!4.49e-07!52;UBERON:0007135!4.49e-07!52;UBERON:0000922!9.53e-07!328;UBERON:0005256!9.57e-07!47;UBERON:0002791!9.92e-07!29;UBERON:0003528!9.92e-07!29;UBERON:0001893!9.92e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.45e-16,23;UBERON:0009856,3.45e-16,23;UBERON:0002107,8.32e-16,22;UBERON:0007499,8.32e-16,22;UBERON:0006925,8.32e-16,22;UBERON:0009497,8.32e-16,22;UBERON:0000015,8.32e-16,22;UBERON:0002423,8.32e-16,22;UBERON:0006235,8.32e-16,22;UBERON:0008835,8.32e-16,22;UBERON:0003894,8.32e-16,22;UBERON:0004161,8.32e-16,22;UBERON:0008836,8.32e-16,22;UBERON:0002365,2.72e-14,25;UBERON:0002330,2.72e-14,25;UBERON:0001017,1.53e-09,73;UBERON:0005172,8.10e-09,49;UBERON:0005173,8.10e-09,49;UBERON:0002417,8.10e-09,49;UBERON:0000916,8.10e-09,49;UBERON:0001016,1.01e-08,75;UBERON:0002020,1.15e-08,34;UBERON:0005256,4.45e-08,45;UBERON:0000073,2.94e-07,54|phase1_expression=1.44133962394315,0.348975407639361,0,1.51232105653415,1.00179145989269,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,1.36069264241712,0,0,0.639969691173627,0.68822784320151,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0.218025156380447,0.659058548203415,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0.771778308107841,3.43840127926508,0,6.06949382578793,7.93486468908049,5.70448263155561,2.71075625655306,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0,0.933206510776299,1.75507719831198,1.05162480675691,6.56997264128748,9.27647871996777,1.10241719293459,2.20444583341944,0.919218786610021,3.30347642998166,5.87361755191863,4.45458946443106,8.44072241473241,9.97215315266265,7.29278718779464,2.51264699101243,3.93933827022176,3.66715794664344,6.48182888042069,8.11518580554887,7.45597783301202,0.227178579999552,0.226714680320357,2.6087803983151,22.371020801516,12.2394840067395,44.7953649059388,42.8852435515462,29.5697745484241,13.2017754923847,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,13.9304333257253,0,2.3750742250372,2.25530924795977,3.04465478312141,2.7673859670727,1.50722640552623,2.82212897125692,2.26199864393416,6.67426412882809,0.144599356919912,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0.585561594023094,0.83778682725382,2.81002760729451,0,0,0,2.69623150928681,3.66000482254901,4.64921102817598,3.30266208365325,3.83573185995496,4.57133698031032,3.40706652442291,1.93494791315601,0.995255764880744,1.51633655060205,0.420883711772948,1.43132487258974,1.60931473103431,1.26043490863744,2.26057226753573,1.2246569847239,1.2811372028485,1.87403449119458,1.03481348295606,0.215567992932842,1.13463648100692,2.11141348996739,2.19195732427575,0.834141747676794,1.0447564995665,1.23469281844766,1.19420560091096,0,0,0,1.03562886267751,0.938104239924385,0.900310307305074,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0,0.233530684734339,0.658239399653922,0.164167464079095,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,1.89260953707715,4.6307075570678,0.330418782983798,1.05780226665418,1.49301775374664,2.32236671860439,2.061879381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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:237387
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=uniprot:P59034,uniprot:Q543Z4
|association_with_transcript=6bp_to_ENSMUST00000057608,NM_145152,uc007fwi.2_5end
|cluster_id=chr10:77365212..77365274,-
|description=CAGE_peak_1_at_Lrrc3_5end
|id=chr10:77365212..77365274,-
|ontology_enrichment_celltype=CL:0000540!4.01e-10!33;CL:0000047!4.01e-10!33;CL:0000031!4.01e-10!33;CL:0000404!4.01e-10!33;CL:0000117!1.71e-07!23;CL:0000337!1.71e-07!23;CL:0000393!3.28e-07!39;CL:0000211!3.28e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,3.43e-10,33;CL:0000047,3.43e-10,33;CL:0000031,3.43e-10,33;CL:0000404,3.43e-10,33;CL:0000393,1.85e-07,39;CL:0000211,1.85e-07,39;CL:0000117,2.50e-07,23;CL:0000337,2.50e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!6.24e-15!23;UBERON:0009856!6.24e-15!23;UBERON:0002107!1.40e-14!22;UBERON:0007499!1.40e-14!22;UBERON:0006925!1.40e-14!22;UBERON:0009497!1.40e-14!22;UBERON:0000015!1.40e-14!22;UBERON:0002423!1.40e-14!22;UBERON:0006235!1.40e-14!22;UBERON:0008835!1.40e-14!22;UBERON:0003894!1.40e-14!22;UBERON:0004161!1.40e-14!22;UBERON:0008836!1.40e-14!22;UBERON:0002365!1.45e-13!25;UBERON:0002330!1.45e-13!25;UBERON:0001017!2.05e-10!73;UBERON:0005743!2.05e-10!73;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0004121!3.25e-09!102;UBERON:0000924!3.25e-09!102;UBERON:0006601!3.25e-09!102;UBERON:0002020!4.25e-09!34;UBERON:0005172!4.70e-09!49;UBERON:0005173!4.70e-09!49;UBERON:0002417!4.70e-09!49;UBERON:0000916!4.70e-09!49;UBERON:0000468!1.06e-08!333;UBERON:0002346!2.09e-08!71;UBERON:0003075!2.09e-08!71;UBERON:0007284!2.09e-08!71;UBERON:0000025!1.18e-07!114;UBERON:0004111!3.84e-07!122;UBERON:0001049!4.49e-07!52;UBERON:0005068!4.49e-07!52;UBERON:0006241!4.49e-07!52;UBERON:0007135!4.49e-07!52;UBERON:0000922!9.53e-07!328;UBERON:0005256!9.57e-07!47;UBERON:0002791!9.92e-07!29;UBERON:0003528!9.92e-07!29;UBERON:0001893!9.92e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.45e-16,23;UBERON:0009856,3.45e-16,23;UBERON:0002107,8.32e-16,22;UBERON:0007499,8.32e-16,22;UBERON:0006925,8.32e-16,22;UBERON:0009497,8.32e-16,22;UBERON:0000015,8.32e-16,22;UBERON:0002423,8.32e-16,22;UBERON:0006235,8.32e-16,22;UBERON:0008835,8.32e-16,22;UBERON:0003894,8.32e-16,22;UBERON:0004161,8.32e-16,22;UBERON:0008836,8.32e-16,22;UBERON:0002365,2.72e-14,25;UBERON:0002330,2.72e-14,25;UBERON:0001017,1.53e-09,73;UBERON:0005172,8.10e-09,49;UBERON:0005173,8.10e-09,49;UBERON:0002417,8.10e-09,49;UBERON:0000916,8.10e-09,49;UBERON:0001016,1.01e-08,75;UBERON:0002020,1.15e-08,34;UBERON:0005256,4.45e-08,45;UBERON:0000073,2.94e-07,54
|phase1_expression=1.44133962394315,0.348975407639361,0,1.51232105653415,1.00179145989269,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,1.36069264241712,0,0,0.639969691173627,0.68822784320151,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0.218025156380447,0.659058548203415,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0.771778308107841,3.43840127926508,0,6.06949382578793,7.93486468908049,5.70448263155561,2.71075625655306,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0,0.933206510776299,1.75507719831198,1.05162480675691,6.56997264128748,9.27647871996777,1.10241719293459,2.20444583341944,0.919218786610021,3.30347642998166,5.87361755191863,4.45458946443106,8.44072241473241,9.97215315266265,7.29278718779464,2.51264699101243,3.93933827022176,3.66715794664344,6.48182888042069,8.11518580554887,7.45597783301202,0.227178579999552,0.226714680320357,2.6087803983151,22.371020801516,12.2394840067395,44.7953649059388,42.8852435515462,29.5697745484241,13.2017754923847,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,13.9304333257253,0,2.3750742250372,2.25530924795977,3.04465478312141,2.7673859670727,1.50722640552623,2.82212897125692,2.26199864393416,6.67426412882809,0.144599356919912,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0.585561594023094,0.83778682725382,2.81002760729451,0,0,0,2.69623150928681,3.66000482254901,4.64921102817598,3.30266208365325,3.83573185995496,4.57133698031032,3.40706652442291,1.93494791315601,0.995255764880744,1.51633655060205,0.420883711772948,1.43132487258974,1.60931473103431,1.26043490863744,2.26057226753573,1.2246569847239,1.2811372028485,1.87403449119458,1.03481348295606,0.215567992932842,1.13463648100692,2.11141348996739,2.19195732427575,0.834141747676794,1.0447564995665,1.23469281844766,1.19420560091096,0,0,0,1.03562886267751,0.938104239924385,0.900310307305074,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0,0.233530684734339,0.658239399653922,0.164167464079095,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,1.89260953707715,4.6307075570678,0.330418782983798,1.05780226665418,1.49301775374664,2.32236671860439,2.06187938115349,1.61346819698674,0.444756087689741,0.760902504450237,1.89811624617805,1.15289268306808,1.00534083520108,3.18330355265841,3.70431765526328,2.69645822596266,1.51296634912286,2.19055400579804,0.948339504765408,1.02823661348756,1.1270773567308,1.4255592949172,1.74557238450863,0.771494018793504,1.64414996523069,1.62371162777562,1.72698600625512,2.46794327843601,48.3217782152053,4.67166296005063,5.11053387294328,7.87017393346988,8.52012509831712,13.5059209461353,12.4766667372896,18.7002489343027,12.1601420081277,22.7885972946108,31.629005436018,26.0498663367952,37.1324831006327,45.9693557863743,32.8297266745099,25.5695066322585,0.369506380333209,0.568474235311454,0.814824882210129,0.848725428875941,0.938760993154008,0.837531287209079,1.42826184531608,0.390267295715598,1.10344600874334,1.32878813789265,1.11618338060241,0.491589944147214,0.863424909329478,0.144649058581512,0,0,1.47529281905711,0.827810238914197,1.9266070798535,1.40654023910644,0,0,4.41711507182759,1.95219372148319,2.15423397732799,2.15071918157297,4.23317480756549,5.37845408498782,5.26253912177363,6.13737301613755,5.13874111330481,0.963963949265421,1.27746076687442,3.02711526234334,1.14020871547503,0.989820737835213,0,1.45668381692989,0.302323556964751,0.754420319023592,0.885905678642318,1.22974059177571,1.29214146584111,2.54473610634254,0,1.26414703174326,0,1.03135543248187,0,1.08036656418786,1.81102157295856,0.428674070063185,1.59606210278046,2.14042581122485,1.81003922662333,0.608929898229199,0.469343416127421,0.21183207086382,2.20528398054962,0.8244312647074,0.645857706783622,0.482503399425247,0.835606408021955,0.164140899745061,4.08073171281791,1.48340241608408,0.170870880797853,2.68302928352189,0.370389054739423,0.188368457004691,0.683471138605126,0,0,0.279902904647316,0,4.77335309007557,2.05618395827738,1.21991680276109,2.37611749807963,2.09088296014469,0.87345025498471,3.50647300600534,7.68677138245624,3.40282724579238,1.8146096260851,2.4853572523477,0,1.19613236835183,0.992750942742586,1.75006069509643,2.71235629303235,1.18269287843545,2.46450201156083,1.43224823328345,0.419437377702843,0,0.288030006257865,0,1.01362607645082,1.23253148597793,0.909445760844565,0.358053391334963,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.304827226619999,0.302478555410522,0.0974578807397524,0.384847366561318,0.233753804363138,0.453460767230423,0.887943813496259,1.97370484540847,0.839423081820392,1.35232715822533,0.93841237725591,1.28206136987086,0.214368379079066,0.501572104035363,4.51801474093653,4.14292712856459,9.16632821503035,4.1244763762485,5.48066015816514,6.0431511791176,3.37511250115903,2.2516060161211,2.71885445390523,3.62432218226274,0.518936737920883,1.19707462020309,2.21953687480374,3.16038732188782,2.51535795153579,2.75765262675021,2.22246727801615,3.09052585858341,3.20919209591815,2.02157769411038,4.05566879824384,3.01802146217722,2.99652823903624,2.4969809437899,2.92920891673628,2.85776214769844,3.01299247456624,1.73618298417335,2.06042950401653,2.79677948255355,1.71434626192708,2.48466128623072,1.1921809497366,3.19762116591123,3.19971893412124,2.62305284464197,2.37806364734604,2.89376682581627,2.71608227691724,2.24456908663095,2.37270036248348,2.06859412988683,1.63692417267876,3.09873682371932,2.12197272079256,2.99772693525535,3.50897412668113,3.00819475667618,1.3390183244819,1.10295709559758,1.39120701372253
|short_description=p1@Lrrc3
}}

Revision as of 18:01, 4 August 2015

Short description:p1@Lrrc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrc3_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 6bp_to_ENSMUST00000057608, NM_145152, uc007fwi.2_5end
EntrezGene:237387
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrrc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C844.80
Mouse hepatocyte, donor6.CNhs13090.11822-124F442.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.93
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B248.32
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E17.87
liver, embryo E15.CNhs10520.433-16D78.52
liver, embryo E16.CNhs10523.462-17F513.51
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G418.70
liver, neonate N00.CNhs11117.641-24F412.16
liver, neonate N03.CNhs11123.1345-25G222.79
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H226.05
liver, neonate N10.CNhs11115.751-24B937.13
liver, neonate N20.CNhs11220.823-25A345.97
liver, neonate N25.CNhs11198.1368-26H132.83
liver, neonate N30.CNhs11106.1382-42D125.57
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A97.69
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.43e-1033
neuronal stem cell3.43e-1033
neuroblast3.43e-1033
electrically signaling cell3.43e-1033
electrically responsive cell1.85e-0739
electrically active cell1.85e-0739
CNS neuron (sensu Vertebrata)2.50e-0723
neuroblast (sensu Vertebrata)2.50e-0723
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