FFCP PHASE1:Mm9::chr7:28516392..28516416,+: Difference between revisions
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{{FFCP|EntrezGene=22718|HGNC=|MCL_coexpression_id=813|UniProt=Q8K0D9|association_with_transcript=0bp_to_ENSMUST00000108336_5end|description=CAGE_peak_2_at_Zfp60_5end|id=chr7:28516392..28516416,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.72e-14!63;UBERON:0002346!3.04e-13!71;UBERON:0003075!3.04e-13!71;UBERON:0007284!3.04e-13!71;UBERON:0003056!7.73e-13!49;UBERON:0000153!3.91e-11!94;UBERON:0004121!1.43e-10!102;UBERON:0000924!1.43e-10!102;UBERON:0006601!1.43e-10!102;UBERON:0000468!2.45e-10!333;UBERON:0000955!2.62e-10!50;UBERON:0006238!2.62e-10!50;UBERON:0002616!9.74e-10!49;UBERON:0007811!1.09e-09!86;UBERON:0001049!3.55e-09!52;UBERON:0005068!3.55e-09!52;UBERON:0006241!3.55e-09!52;UBERON:0007135!3.55e-09!52;UBERON:0000922!7.46e-09!328;UBERON:0003080!9.14e-09!40;UBERON:0000073!1.39e-08!75;UBERON:0001016!1.39e-08!75;UBERON:0001017!1.65e-08!73;UBERON:0005743!1.65e-08!73;UBERON:0002780!3.09e-08!39;UBERON:0001890!3.09e-08!39;UBERON:0006240!3.09e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.25e-14,92;UBERON:0002346,9.50e-14,64;UBERON:0003075,9.50e-14,64;UBERON:0007284,9.50e-14,64;UBERON:0003056,7.65e-13,49;UBERON:0010371,3.08e-12,73;UBERON:0004121,1.28e-10,95;UBERON:0000924,1.28e-10,95;UBERON:0006601,1.28e-10,95;UBERON:0000955,8.41e-10,47;UBERON:0006238,8.41e-10,47;UBERON:0002616,3.10e-09,46;UBERON:0000073,3.47e-09,54;UBERON:0001049,3.55e-09,52;UBERON:0005068,3.55e-09,52;UBERON:0006241,3.55e-09,52;UBERON:0007135,3.55e-09,52;UBERON:0003080,9.08e-09,40;UBERON:0001016,1.47e-08,75;UBERON:0001017,1.74e-08,73;UBERON:0002780,3.08e-08,39;UBERON:0001890,3.08e-08,39;UBERON:0006240,3.08e-08,39|phase1_expression=8.64803774365887,1.39590163055744,0.454999239389536,2.41971369045464,0.500895729946347,1.00727563147134,2.33612640595526,5.4231795845462,0.703943610758334,1.63845168425395,2.05461561870606,2.71225340584144,7.87523357683546,7.43073420561478,1.99865857089398,3.64455481301687,0.699561878128147,8.20201629931418,8.77532375076728,9.33657233955666,5.27268398936633,6.25532992565577,7.31359409589019,2.55987876469451,2.98232065387321,1.72269589234506,0.430761996159075,2.37018355954478,2.85035129184561,3.78045194639896,1.10865255327652,0.635030673459631,2.46025915033828,0,4.62162591602039,2.32728503501889,3.06254034393554,2.51118978442145,1.5626706890476,3.14114246384279,1.17646297606203,2.04913645487534,2.91306211818692,5.91715044485213,5.98123894195136,5.68994931701213,0.782391344348039,0.436050312760893,1.31811709640683,2.13872888981712,0.839918529752175,1.43752564364972,2.34895648480831,2.17608642603403,2.68875039313971,3.34437266846731,4.01146815914259,2.06268836910977,4.45096213891115,3.1739458756322,2.53532561402472,0.338844532069132,1.77858959222228,0.899899717281399,0,0.7104801149461,2.09720077362883,3.07374644257244,8.39885859698669,3.51015439662396,5.46844899513593,1.99955689082663,2.65042249141936,10.2892271340561,4.02550978276593,5.51531271966013,6.60695285996332,8.17198963745201,8.60196586234964,4.48413378282659,4.84884511092771,7.8137005583514,6.97957497503452,7.87867654044352,9.93188610549266,9.1334861496837,7.83044244395066,7.64237727883732,6.58817881998701,6.87701196971748,4.05810284182349,3.44169550792555,0,3.77792234146472,5.19821133958135,3.13618820968135,6.03911006566533,3.40860645156115,0.779358013808606,3.18005617059306,6.19711047017394,7.69958864485907,5.09610479413291,0,2.38140145112336,1.52015919285059,0,4.5673551887624,17.3488382043605,8.60964406575984,4.51061849591953,4.87144765299426,6.6878494204257,7.08396410597326,6.23220147819235,5.90632979249475,4.44950941921873,10.1219549843938,6.19227386364912,4.85300549842228,4.63767188766826,6.30337829075789,3.72783522436244,21.958559775866,17.1746299587033,2.55457055208591,0.599075622529601,0,0.889491589511453,16.3271796951257,16.4700217014706,23.120400788767,17.9039049798045,15.3429274398198,13.2984348518118,13.9527486238272,5.09196819251581,5.59831367745419,6.57079171927554,10.5220927943237,10.7999967659044,10.1156925950728,15.8454674228707,13.1113191517072,8.02830689985669,13.9643955110486,9.93238280333126,14.2286853906459,5.17363183038821,7.75334928688059,10.205165201509,6.1374805079721,7.78532297831674,8.358051996532,7.40815691068596,6.76716507182877,0,0.772043721344145,0.852490498186778,6.62802472113606,5.8631514995274,7.56260658136262,8.04932100989715,10.8220327461072,7.55908853148153,7.67362017676346,8.31647544338819,5.13767506415546,6.91151369636618,9.19337798842933,8.26901857367728,6.57899943413995,8.78200461164202,5.90508242545636,15.9820360908737,17.1850702673405,4.95628174475697,3.70230793328962,9.59797127408553,8.36052018697579,5.28356591420583,6.05050573870028,4.66993892074228,5.89699440948933,2.37264530772256,2.30578536613615,2.76468729680296,2.58643413653496,4.09424582950152,0.898819408654221,4.10662294761919,3.78368419183298,2.46568271239006,7.76889885746156,10.1436962105772,9.16430975303914,7.56414699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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22718 | |||
|HGNC= | |||
|MCL_coexpression_id=813 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K0D9 | |||
|association_with_transcript=0bp_to_ENSMUST00000108336_5end | |||
|cluster_id=chr7:28516392..28516416,+ | |||
|description=CAGE_peak_2_at_Zfp60_5end | |||
|id=chr7:28516392..28516416,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.72e-14!63;UBERON:0002346!3.04e-13!71;UBERON:0003075!3.04e-13!71;UBERON:0007284!3.04e-13!71;UBERON:0003056!7.73e-13!49;UBERON:0000153!3.91e-11!94;UBERON:0004121!1.43e-10!102;UBERON:0000924!1.43e-10!102;UBERON:0006601!1.43e-10!102;UBERON:0000468!2.45e-10!333;UBERON:0000955!2.62e-10!50;UBERON:0006238!2.62e-10!50;UBERON:0002616!9.74e-10!49;UBERON:0007811!1.09e-09!86;UBERON:0001049!3.55e-09!52;UBERON:0005068!3.55e-09!52;UBERON:0006241!3.55e-09!52;UBERON:0007135!3.55e-09!52;UBERON:0000922!7.46e-09!328;UBERON:0003080!9.14e-09!40;UBERON:0000073!1.39e-08!75;UBERON:0001016!1.39e-08!75;UBERON:0001017!1.65e-08!73;UBERON:0005743!1.65e-08!73;UBERON:0002780!3.09e-08!39;UBERON:0001890!3.09e-08!39;UBERON:0006240!3.09e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.25e-14,92;UBERON:0002346,9.50e-14,64;UBERON:0003075,9.50e-14,64;UBERON:0007284,9.50e-14,64;UBERON:0003056,7.65e-13,49;UBERON:0010371,3.08e-12,73;UBERON:0004121,1.28e-10,95;UBERON:0000924,1.28e-10,95;UBERON:0006601,1.28e-10,95;UBERON:0000955,8.41e-10,47;UBERON:0006238,8.41e-10,47;UBERON:0002616,3.10e-09,46;UBERON:0000073,3.47e-09,54;UBERON:0001049,3.55e-09,52;UBERON:0005068,3.55e-09,52;UBERON:0006241,3.55e-09,52;UBERON:0007135,3.55e-09,52;UBERON:0003080,9.08e-09,40;UBERON:0001016,1.47e-08,75;UBERON:0001017,1.74e-08,73;UBERON:0002780,3.08e-08,39;UBERON:0001890,3.08e-08,39;UBERON:0006240,3.08e-08,39 | |||
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| |||
|short_description=p2@Zfp60 | |||
}} |
Revision as of 21:55, 4 August 2015
Short description: | p2@Zfp60 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp60_5end |
Coexpression cluster: | MCL_coexpression_mm9:813 |
Association with transcript: | 0bp_to_ENSMUST00000108336_5end |
EntrezGene: | 22718 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.25e-14 | 92 |
neurectoderm | 9.50e-14 | 64 |
neural plate | 9.50e-14 | 64 |
presumptive neural plate | 9.50e-14 | 64 |
pre-chordal neural plate | 7.65e-13 | 49 |
ecto-epithelium | 3.08e-12 | 73 |
ectoderm-derived structure | 1.28e-10 | 95 |
ectoderm | 1.28e-10 | 95 |
presumptive ectoderm | 1.28e-10 | 95 |
brain | 8.41e-10 | 47 |
future brain | 8.41e-10 | 47 |
regional part of brain | 3.10e-09 | 46 |
regional part of nervous system | 3.47e-09 | 54 |
neural tube | 3.55e-09 | 52 |
neural rod | 3.55e-09 | 52 |
future spinal cord | 3.55e-09 | 52 |
neural keel | 3.55e-09 | 52 |
anterior neural tube | 9.08e-09 | 40 |
nervous system | 1.47e-08 | 75 |
central nervous system | 1.74e-08 | 73 |
regional part of forebrain | 3.08e-08 | 39 |
forebrain | 3.08e-08 | 39 |
future forebrain | 3.08e-08 | 39 |